RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 SMIM26A0A096LP01 95 aa7.17□□□□□ -1.26
COMMD4-205ENST00000562310 SPTSSBQ8NFR3 76 aa7.17□□□□□ -1.26
COMMD4-205ENST00000562310 S4R3F8 94 aa7.13□□□□□ -1.27
COMMD4-205ENST00000562310 FAT4Q6V0I7 4981 aa7.13□□□□□ -1.27
COMMD4-205ENST00000562310 V9GYY9 64 aa7.08□□□□□ -1.28
COMMD4-205ENST00000562310 KRTAP19-2Q3LHN2 52 aa7.07□□□□□ -1.28
COMMD4-205ENST00000562310 LCA10Q71F78 164 aa7.07□□□□□ -1.28
COMMD4-205ENST00000562310 Q1T7F1 81 aa7.04□□□□□ -1.28
COMMD4-205ENST00000562310 KRTAP3-3Q9BYR6 98 aa7.01□□□□□ -1.29
COMMD4-205ENST00000562310 LINC01558Q9Y6Z2 57 aa7□□□□□ -1.29
COMMD4-205ENST00000562310 CSAG1Q6PB30 78 aa6.98□□□□□ -1.29
COMMD4-205ENST00000562310 MUC2Q02817 5179 aa6.96□□□□□ -1.29
COMMD4-205ENST00000562310 PRR15LQ9BU68 103 aa6.95□□□□□ -1.3
COMMD4-205ENST00000562310 LCE2AQ5TA79 106 aaPredicted RBP6.94□□□□□ -1.3
COMMD4-205ENST00000562310 LCE2CQ5TA81 110 aa6.93□□□□□ -1.3
COMMD4-205ENST00000562310 A0A1B0GU69 56 aa6.92□□□□□ -1.3
COMMD4-205ENST00000562310 SEC61GP60059 68 aa6.92□□□□□ -1.3
COMMD4-205ENST00000562310 PSPHP1O15172 72 aa6.87□□□□□ -1.31
COMMD4-205ENST00000562310 H0YAA0 97 aa6.85□□□□□ -1.31
COMMD4-205ENST00000562310 FLGP20930 4061 aaPredicted RBP6.84□□□□□ -1.32
COMMD4-205ENST00000562310 FSIP2Q5CZC0 6907 aa6.84□□□□□ -1.32
COMMD4-205ENST00000562310 Q5VV11 94 aa6.83□□□□□ -1.32
COMMD4-205ENST00000562310 MT1HP80294 61 aa6.82□□□□□ -1.32
COMMD4-205ENST00000562310 CRCT1Q9UGL9 99 aa6.82□□□□□ -1.32
COMMD4-205ENST00000562310 M0R2T5 61 aa6.77□□□□□ -1.33
COMMD4-205ENST00000562310 ADM2Q7Z4H4 148 aa6.77□□□□□ -1.33
COMMD4-205ENST00000562310 KRTAP3-2Q9BYR7 98 aa6.76□□□□□ -1.33
COMMD4-205ENST00000562310 KRTAP10-6P60371 365 aaPredicted RBP6.74□□□□□ -1.33
COMMD4-205ENST00000562310 A0A1B0GU33 70 aa6.71□□□□□ -1.34
COMMD4-205ENST00000562310 A6NED7 52 aa6.71□□□□□ -1.34
COMMD4-205ENST00000562310 UQCR11O14957 56 aa6.71□□□□□ -1.34
COMMD4-205ENST00000562310 LCE2DQ5TA82 110 aaPredicted RBP6.71□□□□□ -1.34
COMMD4-205ENST00000562310 P0C880 135 aa6.7□□□□□ -1.34
COMMD4-205ENST00000562310 M0QZ58 72 aa6.61□□□□□ -1.35
COMMD4-205ENST00000562310 MIR22HGQ0VDD5 57 aa6.61□□□□□ -1.35
COMMD4-205ENST00000562310 CRIPTQ9P021 101 aa6.6□□□□□ -1.35
COMMD4-205ENST00000562310 SPATA8Q6RVD6 105 aa6.59□□□□□ -1.35
COMMD4-205ENST00000562310 CDC42SE1Q9NRR8 79 aa6.59□□□□□ -1.35
COMMD4-205ENST00000562310 BRK1Q8WUW1 75 aa6.57□□□□□ -1.36
COMMD4-205ENST00000562310 R4GN34 69 aa6.56□□□□□ -1.36
COMMD4-205ENST00000562310 MT2AP02795 61 aa6.54□□□□□ -1.36
COMMD4-205ENST00000562310 LORP23490 312 aaPredicted RBP6.54□□□□□ -1.36
COMMD4-205ENST00000562310 KRTAP9-8Q9BYQ0 159 aa6.54□□□□□ -1.36
COMMD4-205ENST00000562310 KRTAP13-4Q3LI77 160 aa6.53□□□□□ -1.36
COMMD4-205ENST00000562310 KRTAP9-7A8MTY7 169 aa6.51□□□□□ -1.37
COMMD4-205ENST00000562310 KRTAP10-10P60014 251 aa6.49□□□□□ -1.37
COMMD4-205ENST00000562310 MT1FP04733 61 aa6.48□□□□□ -1.37
COMMD4-205ENST00000562310 A8MU10 97 aa6.44□□□□□ -1.38
COMMD4-205ENST00000562310 PRO0628Q9UI54 55 aa6.43□□□□□ -1.38
COMMD4-205ENST00000562310 A0A0D9SG42 100 aa6.42□□□□□ -1.38
COMMD4-205ENST00000562310 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.41□□□□□ -1.38
COMMD4-205ENST00000562310 SPRR2GQ9BYE4 73 aa6.41□□□□□ -1.38
COMMD4-205ENST00000562310 K7ERS5 55 aa6.39□□□□□ -1.39
COMMD4-205ENST00000562310 LINC01554Q52M75 96 aa6.39□□□□□ -1.39
COMMD4-205ENST00000562310 A6NN06 94 aa6.37□□□□□ -1.39
COMMD4-205ENST00000562310 KRTAP19-1Q8IUB9 90 aa6.35□□□□□ -1.39
COMMD4-205ENST00000562310 KRTAP12-1P59990 96 aa6.32□□□□□ -1.4
COMMD4-205ENST00000562310 KRTAP9-3Q9BYQ3 159 aa6.31□□□□□ -1.4
COMMD4-205ENST00000562310 SPINT4Q6UDR6 99 aa6.29□□□□□ -1.4
COMMD4-205ENST00000562310 KRTAP12-2P59991 146 aa6.28□□□□□ -1.4
COMMD4-205ENST00000562310 KRTAP19-8Q3LI54 63 aa6.26□□□□□ -1.41
COMMD4-205ENST00000562310 PMAIP1Q13794 54 aa6.21□□□□□ -1.42
COMMD4-205ENST00000562310 PLAC4Q8WY50 150 aa6.2□□□□□ -1.42
COMMD4-205ENST00000562310 CAMK2N1Q7Z7J9 78 aa6.15□□□□□ -1.42
COMMD4-205ENST00000562310 MT1BP07438 61 aa6.13□□□□□ -1.43
COMMD4-205ENST00000562310 LCE2BO14633 110 aa6.12□□□□□ -1.43
COMMD4-205ENST00000562310 SSPOA2VEC9 5147 aa6.1□□□□□ -1.43
COMMD4-205ENST00000562310 ROMO1P60602 79 aa6.06□□□□□ -1.44
COMMD4-205ENST00000562310 SYNE2Q8WXH0 6885 aaKnown RBP6.06□□□□□ -1.44
COMMD4-205ENST00000562310 FCGBPQ9Y6R7 5405 aaPredicted RBP6.05□□□□□ -1.44
COMMD4-205ENST00000562310 MACF1Q9UPN3 7388 aaKnown RBP6.03□□□□□ -1.44
COMMD4-205ENST00000562310 USH2AO75445 5202 aa6.03□□□□□ -1.44
COMMD4-205ENST00000562310 KTN1-AS1Q86SY8 53 aa5.97□□□□□ -1.45
COMMD4-205ENST00000562310 C10orf95Q9H7T3 257 aa5.96□□□□□ -1.46
COMMD4-205ENST00000562310 PRO2289Q9P1D8 64 aa5.96□□□□□ -1.46
COMMD4-205ENST00000562310 MT1XP80297 61 aa5.93□□□□□ -1.46
COMMD4-205ENST00000562310 KRTAP10-5P60370 271 aa5.9□□□□□ -1.46
COMMD4-205ENST00000562310 KRTAP25-1Q3LHN0 102 aa5.88□□□□□ -1.47
COMMD4-205ENST00000562310 TNP1P09430 55 aa5.85□□□□□ -1.47
COMMD4-205ENST00000562310 KRTAP19-6Q3LI70 58 aa5.83□□□□□ -1.48
COMMD4-205ENST00000562310 NEBP20929 6669 aa5.8□□□□□ -1.48
COMMD4-205ENST00000562310 PRAC1Q96KF2 57 aa5.78□□□□□ -1.48
COMMD4-205ENST00000562310 KRTAP6-3Q3LI67 103 aa5.74□□□□□ -1.49
COMMD4-205ENST00000562310 SVIPQ8NHG7 77 aa5.71□□□□□ -1.5
COMMD4-205ENST00000562310 KRTAP23-1A1A580 65 aa5.7□□□□□ -1.5
COMMD4-205ENST00000562310 PP632Q6XCG6 107 aa5.69□□□□□ -1.5
COMMD4-205ENST00000562310 KRTAP10-7P60409 375 aaPredicted RBP5.65□□□□□ -1.5
COMMD4-205ENST00000562310 KRTAP10-12P60413 245 aa5.65□□□□□ -1.5
COMMD4-205ENST00000562310 KRTAP20-1Q3LI63 56 aa5.63□□□□□ -1.51
COMMD4-205ENST00000562310 LCE3AQ5TA76 89 aa5.56□□□□□ -1.52
COMMD4-205ENST00000562310 MUC12Q9UKN1 5478 aa5.51□□□□□ -1.53
COMMD4-205ENST00000562310 KRTAP8-1Q8IUC2 63 aa5.48□□□□□ -1.53
COMMD4-205ENST00000562310 KRTAP4-8A0A0G2JLE6 195 aa5.41□□□□□ -1.54
COMMD4-205ENST00000562310 KRTAP4-8Q9BYQ9 185 aa5.41□□□□□ -1.54
COMMD4-205ENST00000562310 KRTAP12-3P60328 96 aa5.37□□□□□ -1.55
COMMD4-205ENST00000562310 KRTAP19-5Q3LI72 72 aa5.33□□□□□ -1.56
COMMD4-205ENST00000562310 KMT2DO14686 5537 aa5.31□□□□□ -1.56
COMMD4-205ENST00000562310 KRTAP2-3P0C7H8 128 aa5.28□□□□□ -1.56
COMMD4-205ENST00000562310 KRTAP19-7Q3SYF9 63 aa5.28□□□□□ -1.56
COMMD4-205ENST00000562310 KRTAP2-4Q9BYR9 128 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms