RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 ATP5EP2Q5VTU8 51 aa6.05□□□□□ -1.44
USB1-205ENST00000561743 Q5VV11 94 aa6.05□□□□□ -1.44
USB1-205ENST00000561743 TRAV22A0A0B4J277 110 aa6.04□□□□□ -1.44
USB1-205ENST00000561743 KLKP1Q107X0 134 aa6.03□□□□□ -1.44
USB1-205ENST00000561743 IMUPQ9GZP8 106 aa6.03□□□□□ -1.44
USB1-205ENST00000561743 A0A087WVE0 104 aa6.02□□□□□ -1.45
USB1-205ENST00000561743 A6NN06 94 aa6.02□□□□□ -1.45
USB1-205ENST00000561743 MT-ATP8P03928 68 aa6.02□□□□□ -1.45
USB1-205ENST00000561743 LOC101927531A0A1B0GV80 90 aa6.01□□□□□ -1.45
USB1-205ENST00000561743 PCP4P48539 62 aa5.99□□□□□ -1.45
USB1-205ENST00000561743 LOC100996750A0A140TA64 210 aa5.97□□□□□ -1.45
USB1-205ENST00000561743 KRTAP4-6Q9BYQ5 205 aa5.97□□□□□ -1.45
USB1-205ENST00000561743 KRTAP10-5P60370 271 aa5.96□□□□□ -1.46
USB1-205ENST00000561743 HIST1H4AP62805 103 aaKnown RBP5.96□□□□□ -1.46
USB1-205ENST00000561743 UQCRQO14949 82 aa5.94□□□□□ -1.46
USB1-205ENST00000561743 H0Y9P7 68 aa5.93□□□□□ -1.46
USB1-205ENST00000561743 ATOX1O00244 68 aa5.92□□□□□ -1.46
USB1-205ENST00000561743 CRIPTQ9P021 101 aa5.92□□□□□ -1.46
USB1-205ENST00000561743 H0YAA0 97 aa5.88□□□□□ -1.47
USB1-205ENST00000561743 NDUFC1O43677 76 aa5.88□□□□□ -1.47
USB1-205ENST00000561743 ANAPC13Q9BS18 74 aa5.85□□□□□ -1.47
USB1-205ENST00000561743 A8MUN3 132 aa5.84□□□□□ -1.47
USB1-205ENST00000561743 MUC12Q9UKN1 5478 aa5.84□□□□□ -1.48
USB1-205ENST00000561743 LINC00208Q96KT6 92 aa5.83□□□□□ -1.48
USB1-205ENST00000561743 NEBP20929 6669 aa5.8□□□□□ -1.48
USB1-205ENST00000561743 ADM2Q7Z4H4 148 aa5.8□□□□□ -1.48
USB1-205ENST00000561743 OCR1Q9BZK8 76 aa5.8□□□□□ -1.48
USB1-205ENST00000561743 KRTAP5-9P26371 169 aa5.79□□□□□ -1.48
USB1-205ENST00000561743 SMIM20Q8N5G0 67 aa5.79□□□□□ -1.48
USB1-205ENST00000561743 MP68P56378 58 aa5.77□□□□□ -1.49
USB1-205ENST00000561743 SERP2Q8N6R1 65 aa5.75□□□□□ -1.49
USB1-205ENST00000561743 COX7CP15954 63 aa5.74□□□□□ -1.49
USB1-205ENST00000561743 KMT2DO14686 5537 aa5.72□□□□□ -1.49
USB1-205ENST00000561743 TRAV7A0A075B6U4 112 aa5.71□□□□□ -1.5
USB1-205ENST00000561743 MT1XP80297 61 aa5.69□□□□□ -1.5
USB1-205ENST00000561743 H3BPC8 53 aa5.68□□□□□ -1.5
USB1-205ENST00000561743 CCDC179H3BU77 68 aa5.68□□□□□ -1.5
USB1-205ENST00000561743 P0C880 135 aa5.67□□□□□ -1.5
USB1-205ENST00000561743 DMAC1Q96GE9 116 aa5.67□□□□□ -1.5
USB1-205ENST00000561743 PRO2289Q9P1D8 64 aa5.67□□□□□ -1.5
USB1-205ENST00000561743 MDN1Q9NU22 5596 aa5.66□□□□□ -1.5
USB1-205ENST00000561743 KRTAP20-1Q3LI63 56 aa5.66□□□□□ -1.5
USB1-205ENST00000561743 R4GN34 69 aa5.66□□□□□ -1.5
USB1-205ENST00000561743 PLAC4Q8WY50 150 aa5.65□□□□□ -1.5
USB1-205ENST00000561743 C20orf197Q8N268 126 aa5.63□□□□□ -1.51
USB1-205ENST00000561743 M0QZ58 72 aa5.61□□□□□ -1.51
USB1-205ENST00000561743 SPRR2FQ96RM1 72 aa5.59□□□□□ -1.51
USB1-205ENST00000561743 KRTAP12-2P59991 146 aa5.56□□□□□ -1.52
USB1-205ENST00000561743 KRTAP8-1Q8IUC2 63 aa5.54□□□□□ -1.52
USB1-205ENST00000561743 TMEM258P61165 79 aa5.53□□□□□ -1.52
USB1-205ENST00000561743 LINC01554Q52M75 96 aa5.53□□□□□ -1.52
USB1-205ENST00000561743 SPRR2EP22531 72 aa5.52□□□□□ -1.53
USB1-205ENST00000561743 SPRR2BP35325 72 aa5.52□□□□□ -1.53
USB1-205ENST00000561743 SPRR2AP35326 72 aa5.52□□□□□ -1.53
USB1-205ENST00000561743 SNURFQ9Y675 71 aa5.5□□□□□ -1.53
USB1-205ENST00000561743 KRTAP2-3P0C7H8 128 aa5.49□□□□□ -1.53
USB1-205ENST00000561743 ACYP2P14621 99 aa5.49□□□□□ -1.53
USB1-205ENST00000561743 KRTAP2-4Q9BYR9 128 aa5.49□□□□□ -1.53
USB1-205ENST00000561743 H7BZZ5 65 aa5.48□□□□□ -1.53
USB1-205ENST00000561743 KRTAP4-8A0A0G2JLE6 195 aa5.47□□□□□ -1.53
USB1-205ENST00000561743 RPS28P62857 69 aaKnown RBP5.47□□□□□ -1.53
USB1-205ENST00000561743 KRTAP4-8Q9BYQ9 185 aa5.47□□□□□ -1.53
USB1-205ENST00000561743 ATP5EP56381 51 aaPredicted RBP5.46□□□□□ -1.54
USB1-205ENST00000561743 LCE1AQ5T7P2 110 aa5.45□□□□□ -1.54
USB1-205ENST00000561743 CYSTM1Q9H1C7 97 aa5.45□□□□□ -1.54
USB1-205ENST00000561743 KRTAP10-7P60409 375 aaPredicted RBP5.43□□□□□ -1.54
USB1-205ENST00000561743 SPTSSBQ8NFR3 76 aa5.43□□□□□ -1.54
USB1-205ENST00000561743 KRTAP10-12P60413 245 aa5.4□□□□□ -1.54
USB1-205ENST00000561743 CHKB-CPT1BH3BT56 60 aa5.38□□□□□ -1.55
USB1-205ENST00000561743 SPANXA2-OT1Q8N9U9 137 aa5.38□□□□□ -1.55
USB1-205ENST00000561743 SERP1Q9Y6X1 66 aa5.37□□□□□ -1.55
USB1-205ENST00000561743 SPRR2DP22532 72 aa5.34□□□□□ -1.55
USB1-205ENST00000561743 KRTAP2-2Q9BYT5 123 aa5.31□□□□□ -1.56
USB1-205ENST00000561743 KRTAP2-1Q9BYU5 128 aa5.31□□□□□ -1.56
USB1-205ENST00000561743 KRTAP13-4Q3LI77 160 aa5.28□□□□□ -1.56
USB1-205ENST00000561743 SMIM26A0A096LP01 95 aa5.27□□□□□ -1.57
USB1-205ENST00000561743 LCE3BQ5TA77 95 aa5.2□□□□□ -1.58
USB1-205ENST00000561743 CAMK2N1Q7Z7J9 78 aa5.18□□□□□ -1.58
USB1-205ENST00000561743 V9GYY9 64 aa5.18□□□□□ -1.58
USB1-205ENST00000561743 COA5Q86WW8 74 aa5.17□□□□□ -1.58
USB1-205ENST00000561743 H3BS24 57 aa5.16□□□□□ -1.58
USB1-205ENST00000561743 Q1T7F1 81 aa5.14□□□□□ -1.59
USB1-205ENST00000561743 SEC61GP60059 68 aa5.1□□□□□ -1.59
USB1-205ENST00000561743 KRTAP19-7Q3SYF9 63 aa5.09□□□□□ -1.59
USB1-205ENST00000561743 A0A0D9SG42 100 aa5.08□□□□□ -1.6
USB1-205ENST00000561743 SPATA8Q6RVD6 105 aa5.07□□□□□ -1.6
USB1-205ENST00000561743 LCE5AQ5TCM9 118 aa5.05□□□□□ -1.6
USB1-205ENST00000561743 MT1EP04732 61 aa5.04□□□□□ -1.6
USB1-205ENST00000561743 LINC01558Q9Y6Z2 57 aa5.04□□□□□ -1.6
USB1-205ENST00000561743 A0A1B0GU33 70 aa5.03□□□□□ -1.6
USB1-205ENST00000561743 KRTAP4-12Q9BQ66 201 aa5.02□□□□□ -1.61
USB1-205ENST00000561743 SPINT4Q6UDR6 99 aa5.01□□□□□ -1.61
USB1-205ENST00000561743 KRTAP19-3Q7Z4W3 81 aa5.01□□□□□ -1.61
USB1-205ENST00000561743 KRTAP12-1P59990 96 aa5□□□□□ -1.61
USB1-205ENST00000561743 KRTAP9-9Q9BYP9 154 aa5□□□□□ -1.61
USB1-205ENST00000561743 KRTAP9-4Q9BYQ2 154 aa5□□□□□ -1.61
USB1-205ENST00000561743 PRR15LQ9BU68 103 aa4.99□□□□□ -1.61
USB1-205ENST00000561743 DSTQ03001 7570 aaKnown RBP4.97□□□□□ -1.61
USB1-205ENST00000561743 PSPHP1O15172 72 aa4.96□□□□□ -1.62
USB1-205ENST00000561743 A0A1B0GU69 56 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms