RNA–Protein interactions for RNA: ENST00000561707.1

COTL1-202, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 1 (best)

Gene COTL1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-202ENST00000561707 A8MUN3 132 aa6.33□□□□□ -1.4
COTL1-202ENST00000561707 ACYP2P14621 99 aa6.32□□□□□ -1.4
COTL1-202ENST00000561707 TMEM258P61165 79 aa6.31□□□□□ -1.4
COTL1-202ENST00000561707 S4R3F8 94 aa6.27□□□□□ -1.41
COTL1-202ENST00000561707 MT1HP80294 61 aa6.26□□□□□ -1.41
COTL1-202ENST00000561707 LCA10Q71F78 164 aa6.26□□□□□ -1.41
COTL1-202ENST00000561707 ATP5EP56381 51 aaPredicted RBP6.25□□□□□ -1.41
COTL1-202ENST00000561707 COA5Q86WW8 74 aa6.25□□□□□ -1.41
COTL1-202ENST00000561707 FAT4Q6V0I7 4981 aa6.24□□□□□ -1.41
COTL1-202ENST00000561707 FLGP20930 4061 aaPredicted RBP6.24□□□□□ -1.41
COTL1-202ENST00000561707 KRTAP9-2Q9BYQ4 174 aa6.22□□□□□ -1.41
COTL1-202ENST00000561707 CHKB-CPT1BH3BT56 60 aa6.2□□□□□ -1.42
COTL1-202ENST00000561707 M0R2T5 61 aa6.17□□□□□ -1.42
COTL1-202ENST00000561707 CSAG1Q6PB30 78 aa6.16□□□□□ -1.42
COTL1-202ENST00000561707 SERP1Q9Y6X1 66 aa6.14□□□□□ -1.43
COTL1-202ENST00000561707 KRTAP9-6A0A140TA67 174 aa6.13□□□□□ -1.43
COTL1-202ENST00000561707 SPTSSBQ8NFR3 76 aa6.09□□□□□ -1.43
COTL1-202ENST00000561707 KRTAP10-6P60371 365 aaPredicted RBP6.07□□□□□ -1.44
COTL1-202ENST00000561707 RPS28P62857 69 aaKnown RBP6.04□□□□□ -1.44
COTL1-202ENST00000561707 KRTAP9-8Q9BYQ0 159 aa6.02□□□□□ -1.45
COTL1-202ENST00000561707 ADM2Q7Z4H4 148 aa6□□□□□ -1.45
COTL1-202ENST00000561707 MT2AP02795 61 aa5.98□□□□□ -1.45
COTL1-202ENST00000561707 SMIM26A0A096LP01 95 aa5.96□□□□□ -1.46
COTL1-202ENST00000561707 H0YAA0 97 aa5.96□□□□□ -1.46
COTL1-202ENST00000561707 MT1FP04733 61 aa5.95□□□□□ -1.46
COTL1-202ENST00000561707 P0C880 135 aa5.95□□□□□ -1.46
COTL1-202ENST00000561707 LINC01558Q9Y6Z2 57 aa5.94□□□□□ -1.46
COTL1-202ENST00000561707 KRTAP10-10P60014 251 aa5.93□□□□□ -1.46
COTL1-202ENST00000561707 A0A1B0GU69 56 aa5.89□□□□□ -1.47
COTL1-202ENST00000561707 SEC61GP60059 68 aa5.89□□□□□ -1.47
COTL1-202ENST00000561707 Q1T7F1 81 aa5.88□□□□□ -1.47
COTL1-202ENST00000561707 FSIP2Q5CZC0 6907 aa5.87□□□□□ -1.47
COTL1-202ENST00000561707 PRR15LQ9BU68 103 aa5.85□□□□□ -1.47
COTL1-202ENST00000561707 V9GYY9 64 aa5.84□□□□□ -1.47
COTL1-202ENST00000561707 PSPHP1O15172 72 aa5.83□□□□□ -1.48
COTL1-202ENST00000561707 KRTAP9-3Q9BYQ3 159 aa5.81□□□□□ -1.48
COTL1-202ENST00000561707 CRCT1Q9UGL9 99 aa5.8□□□□□ -1.48
COTL1-202ENST00000561707 A0A1B0GU33 70 aa5.79□□□□□ -1.48
COTL1-202ENST00000561707 KRTAP13-4Q3LI77 160 aa5.77□□□□□ -1.49
COTL1-202ENST00000561707 KRTAP19-1Q8IUB9 90 aa5.77□□□□□ -1.49
COTL1-202ENST00000561707 M0QZ58 72 aa5.76□□□□□ -1.49
COTL1-202ENST00000561707 Q5VV11 94 aa5.76□□□□□ -1.49
COTL1-202ENST00000561707 CRIPTQ9P021 101 aa5.76□□□□□ -1.49
COTL1-202ENST00000561707 R4GN34 69 aa5.75□□□□□ -1.49
COTL1-202ENST00000561707 SPATA8Q6RVD6 105 aa5.74□□□□□ -1.49
COTL1-202ENST00000561707 SPRR2GQ9BYE4 73 aa5.72□□□□□ -1.49
COTL1-202ENST00000561707 LINC01554Q52M75 96 aa5.68□□□□□ -1.5
COTL1-202ENST00000561707 UQCR11O14957 56 aa5.65□□□□□ -1.5
COTL1-202ENST00000561707 A0A0D9SG42 100 aa5.64□□□□□ -1.51
COTL1-202ENST00000561707 A8MU10 97 aa5.64□□□□□ -1.51
COTL1-202ENST00000561707 KRTAP19-8Q3LI54 63 aa5.63□□□□□ -1.51
COTL1-202ENST00000561707 A6NED7 52 aa5.62□□□□□ -1.51
COTL1-202ENST00000561707 MIR22HGQ0VDD5 57 aa5.61□□□□□ -1.51
COTL1-202ENST00000561707 SVIPQ8NHG7 77 aa5.6□□□□□ -1.51
COTL1-202ENST00000561707 MT1BP07438 61 aa5.59□□□□□ -1.51
COTL1-202ENST00000561707 KRTAP12-1P59990 96 aa5.52□□□□□ -1.53
COTL1-202ENST00000561707 SPINT4Q6UDR6 99 aa5.52□□□□□ -1.53
COTL1-202ENST00000561707 PLAC4Q8WY50 150 aa5.51□□□□□ -1.53
COTL1-202ENST00000561707 A6NN06 94 aa5.5□□□□□ -1.53
COTL1-202ENST00000561707 KRTAP12-2P59991 146 aa5.5□□□□□ -1.53
COTL1-202ENST00000561707 USH2AO75445 5202 aa5.49□□□□□ -1.53
COTL1-202ENST00000561707 KRTAP9-7A8MTY7 169 aa5.47□□□□□ -1.53
COTL1-202ENST00000561707 CDC42SE1Q9NRR8 79 aa5.47□□□□□ -1.53
COTL1-202ENST00000561707 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.44□□□□□ -1.54
COTL1-202ENST00000561707 BRK1Q8WUW1 75 aa5.41□□□□□ -1.54
COTL1-202ENST00000561707 SSPOA2VEC9 5147 aa5.38□□□□□ -1.55
COTL1-202ENST00000561707 CAMK2N1Q7Z7J9 78 aa5.37□□□□□ -1.55
COTL1-202ENST00000561707 MT1XP80297 61 aa5.36□□□□□ -1.55
COTL1-202ENST00000561707 KRTAP19-6Q3LI70 58 aa5.36□□□□□ -1.55
COTL1-202ENST00000561707 K7ERS5 55 aa5.34□□□□□ -1.55
COTL1-202ENST00000561707 KRTAP10-5P60370 271 aa5.34□□□□□ -1.55
COTL1-202ENST00000561707 FCGBPQ9Y6R7 5405 aaPredicted RBP5.34□□□□□ -1.56
COTL1-202ENST00000561707 LOC100996750A0A140TA64 210 aa5.31□□□□□ -1.56
COTL1-202ENST00000561707 KRTAP4-6Q9BYQ5 205 aa5.31□□□□□ -1.56
COTL1-202ENST00000561707 KRTAP23-1A1A580 65 aa5.27□□□□□ -1.57
COTL1-202ENST00000561707 C10orf95Q9H7T3 257 aa5.27□□□□□ -1.57
COTL1-202ENST00000561707 KRTAP19-4Q3LI73 84 aa5.25□□□□□ -1.57
COTL1-202ENST00000561707 PRO2289Q9P1D8 64 aa5.25□□□□□ -1.57
COTL1-202ENST00000561707 MACF1Q9UPN3 7388 aaKnown RBP5.23□□□□□ -1.57
COTL1-202ENST00000561707 SYNE2Q8WXH0 6885 aaKnown RBP5.2□□□□□ -1.58
COTL1-202ENST00000561707 PRO0628Q9UI54 55 aa5.16□□□□□ -1.58
COTL1-202ENST00000561707 KRTAP10-7P60409 375 aaPredicted RBP5.15□□□□□ -1.59
COTL1-202ENST00000561707 ROMO1P60602 79 aa5.13□□□□□ -1.59
COTL1-202ENST00000561707 PMAIP1Q13794 54 aa5.11□□□□□ -1.59
COTL1-202ENST00000561707 TNP1P09430 55 aa5.08□□□□□ -1.6
COTL1-202ENST00000561707 KRTAP4-8Q9BYQ9 185 aa5.07□□□□□ -1.6
COTL1-202ENST00000561707 KRTAP10-12P60413 245 aa5.06□□□□□ -1.6
COTL1-202ENST00000561707 KRTAP4-12Q9BQ66 201 aa5.04□□□□□ -1.6
COTL1-202ENST00000561707 KRTAP4-8A0A0G2JLE6 195 aa5.02□□□□□ -1.61
COTL1-202ENST00000561707 KRTAP25-1Q3LHN0 102 aa5.02□□□□□ -1.61
COTL1-202ENST00000561707 NEBP20929 6669 aa4.97□□□□□ -1.61
COTL1-202ENST00000561707 KRTAP6-3Q3LI67 103 aa4.96□□□□□ -1.62
COTL1-202ENST00000561707 LCE3AQ5TA76 89 aa4.94□□□□□ -1.62
COTL1-202ENST00000561707 LCE4AQ5TA78 99 aa4.93□□□□□ -1.62
COTL1-202ENST00000561707 MUC12Q9UKN1 5478 aa4.91□□□□□ -1.62
COTL1-202ENST00000561707 LCE3BQ5TA77 95 aa4.89□□□□□ -1.63
COTL1-202ENST00000561707 KMT2DO14686 5537 aa4.87□□□□□ -1.63
COTL1-202ENST00000561707 KRTAP8-1Q8IUC2 63 aa4.87□□□□□ -1.63
COTL1-202ENST00000561707 PRAC1Q96KF2 57 aa4.87□□□□□ -1.63
COTL1-202ENST00000561707 KRTAP19-5Q3LI72 72 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms