RNA–Protein interactions for RNA: ENST00000560099.5

PSMA4-218, Transcript of proteasome subunit alpha 4, humanhuman

TSL 2

Gene PSMA4, Length 2,596 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-218ENST00000560099 CSAG1Q6PB30 78 aa10.67□□□□□ -0.7
PSMA4-218ENST00000560099 Q5VSD8 79 aa10.65□□□□□ -0.71
PSMA4-218ENST00000560099 RPL37P61927 97 aaKnown RBP10.61□□□□□ -0.71
PSMA4-218ENST00000560099 LINC01554Q52M75 96 aa10.59□□□□□ -0.71
PSMA4-218ENST00000560099 KRTAP3-3Q9BYR6 98 aa10.59□□□□□ -0.71
PSMA4-218ENST00000560099 XP32Q5T750 250 aa10.58□□□□□ -0.72
PSMA4-218ENST00000560099 KRTAP17-1Q9BYP8 105 aa10.58□□□□□ -0.72
PSMA4-218ENST00000560099 RYR1P21817 5038 aa10.57□□□□□ -0.72
PSMA4-218ENST00000560099 RYR3Q15413 4870 aa10.55□□□□□ -0.72
PSMA4-218ENST00000560099 KRTAP10-6P60371 365 aaPredicted RBP10.5□□□□□ -0.73
PSMA4-218ENST00000560099 KIAA1109Q2LD37 5005 aa10.44□□□□□ -0.74
PSMA4-218ENST00000560099 KRTAP3-2Q9BYR7 98 aa10.43□□□□□ -0.74
PSMA4-218ENST00000560099 KRTAP13-4Q3LI77 160 aa10.42□□□□□ -0.74
PSMA4-218ENST00000560099 S4R3F8 94 aa10.41□□□□□ -0.74
PSMA4-218ENST00000560099 MT1HL1P0DM35 61 aa10.4□□□□□ -0.74
PSMA4-218ENST00000560099 LPAP08519 4548 aa10.4□□□□□ -0.75
PSMA4-218ENST00000560099 K7ERS5 55 aa10.37□□□□□ -0.75
PSMA4-218ENST00000560099 KRTAP25-1Q3LHN0 102 aa10.36□□□□□ -0.75
PSMA4-218ENST00000560099 LRP2P98164 4655 aa10.35□□□□□ -0.75
PSMA4-218ENST00000560099 A0A0D9SG42 100 aa10.31□□□□□ -0.76
PSMA4-218ENST00000560099 P0C880 135 aa10.3□□□□□ -0.76
PSMA4-218ENST00000560099 CRIPTQ9P021 101 aa10.29□□□□□ -0.76
PSMA4-218ENST00000560099 ROMO1P60602 79 aa10.2□□□□□ -0.78
PSMA4-218ENST00000560099 EPPK1P58107 5090 aaKnown RBP10.16□□□□□ -0.78
PSMA4-218ENST00000560099 TPRXLQ17RH7 258 aa10.13□□□□□ -0.79
PSMA4-218ENST00000560099 ABCA13Q86UQ4 5058 aa10.08□□□□□ -0.8
PSMA4-218ENST00000560099 KRTAP12-2P59991 146 aa10.06□□□□□ -0.8
PSMA4-218ENST00000560099 KRTAP12-1P59990 96 aa9.98□□□□□ -0.81
PSMA4-218ENST00000560099 KRTAP4-5Q9BYR2 181 aa9.98□□□□□ -0.81
PSMA4-218ENST00000560099 SPINT4Q6UDR6 99 aa9.94□□□□□ -0.82
PSMA4-218ENST00000560099 C10orf95Q9H7T3 257 aa9.92□□□□□ -0.82
PSMA4-218ENST00000560099 M0QZ58 72 aa9.88□□□□□ -0.83
PSMA4-218ENST00000560099 MUC17Q685J3 4493 aa9.86□□□□□ -0.83
PSMA4-218ENST00000560099 H3BS24 57 aa9.78□□□□□ -0.84
PSMA4-218ENST00000560099 KRTAP4-1Q9BYQ7 146 aa9.74□□□□□ -0.85
PSMA4-218ENST00000560099 SEC61BP60468 96 aaKnown RBP9.72□□□□□ -0.85
PSMA4-218ENST00000560099 R4GN34 69 aa9.67□□□□□ -0.86
PSMA4-218ENST00000560099 LORP23490 312 aaPredicted RBP9.66□□□□□ -0.86
PSMA4-218ENST00000560099 HERC2O95714 4834 aa9.63□□□□□ -0.87
PSMA4-218ENST00000560099 J3QL48 77 aa9.56□□□□□ -0.88
PSMA4-218ENST00000560099 KRTAP19-2Q3LHN2 52 aa9.56□□□□□ -0.88
PSMA4-218ENST00000560099 MUC2Q02817 5179 aa9.47□□□□□ -0.89
PSMA4-218ENST00000560099 KRTAP15-1Q3LI76 137 aa9.47□□□□□ -0.89
PSMA4-218ENST00000560099 FLGP20930 4061 aaPredicted RBP9.39□□□□□ -0.91
PSMA4-218ENST00000560099 BIRC6Q9NR09 4857 aa9.33□□□□□ -0.92
PSMA4-218ENST00000560099 NDUFAF8A1L188 74 aa9.25□□□□□ -0.93
PSMA4-218ENST00000560099 HERC1Q15751 4861 aa9.2□□□□□ -0.94
PSMA4-218ENST00000560099 CAMK2N1Q7Z7J9 78 aa9.18□□□□□ -0.94
PSMA4-218ENST00000560099 PCLOQ9Y6V0 5065 aa9.14□□□□□ -0.95
PSMA4-218ENST00000560099 HMCN2Q8NDA2 5059 aa9.08□□□□□ -0.96
PSMA4-218ENST00000560099 PLAC4Q8WY50 150 aa9.05□□□□□ -0.96
PSMA4-218ENST00000560099 FAT4Q6V0I7 4981 aa9.03□□□□□ -0.96
PSMA4-218ENST00000560099 PP632Q6XCG6 107 aa8.97□□□□□ -0.97
PSMA4-218ENST00000560099 LCE2CQ5TA81 110 aa8.97□□□□□ -0.97
PSMA4-218ENST00000560099 TNP1P09430 55 aa8.82□□□□□ -1
PSMA4-218ENST00000560099 KRTAP19-1Q8IUB9 90 aa8.77□□□□□ -1.01
PSMA4-218ENST00000560099 SPRR2GQ9BYE4 73 aa8.77□□□□□ -1.01
PSMA4-218ENST00000560099 RNF213Q63HN8 5207 aa8.71□□□□□ -1.02
PSMA4-218ENST00000560099 M0R2T5 61 aa8.7□□□□□ -1.02
PSMA4-218ENST00000560099 MT1HP80294 61 aa8.69□□□□□ -1.02
PSMA4-218ENST00000560099 KRTAP23-1A1A580 65 aa8.67□□□□□ -1.02
PSMA4-218ENST00000560099 UBR4Q5T4S7 5183 aa8.67□□□□□ -1.02
PSMA4-218ENST00000560099 MT1FP04733 61 aa8.59□□□□□ -1.03
PSMA4-218ENST00000560099 MT2AP02795 61 aa8.57□□□□□ -1.04
PSMA4-218ENST00000560099 LUZP6Q538Z0 58 aa8.57□□□□□ -1.04
PSMA4-218ENST00000560099 KRTAP10-10P60014 251 aa8.54□□□□□ -1.04
PSMA4-218ENST00000560099 KRTAP9-8Q9BYQ0 159 aa8.52□□□□□ -1.05
PSMA4-218ENST00000560099 SPRR5A0A1B0GTR4 108 aa8.44□□□□□ -1.06
PSMA4-218ENST00000560099 LCE3AQ5TA76 89 aa8.42□□□□□ -1.06
PSMA4-218ENST00000560099 KRTAP19-8Q3LI54 63 aa8.37□□□□□ -1.07
PSMA4-218ENST00000560099 MT1BP07438 61 aa8.31□□□□□ -1.08
PSMA4-218ENST00000560099 KRTAP10-5P60370 271 aa8.26□□□□□ -1.09
PSMA4-218ENST00000560099 MT1XP80297 61 aa8.25□□□□□ -1.09
PSMA4-218ENST00000560099 KRTAP8-1Q8IUC2 63 aa8.18□□□□□ -1.1
PSMA4-218ENST00000560099 A0A0A0MQY5 61 aa8.15□□□□□ -1.1
PSMA4-218ENST00000560099 KRTAP9-3Q9BYQ3 159 aa8.15□□□□□ -1.1
PSMA4-218ENST00000560099 KRTAP10-12P60413 245 aa8.05□□□□□ -1.12
PSMA4-218ENST00000560099 KRTAP10-7P60409 375 aaPredicted RBP8.04□□□□□ -1.12
PSMA4-218ENST00000560099 KRTAP12-3P60328 96 aa8□□□□□ -1.13
PSMA4-218ENST00000560099 LCE2BO14633 110 aa7.85□□□□□ -1.15
PSMA4-218ENST00000560099 PRO2289Q9P1D8 64 aa7.84□□□□□ -1.15
PSMA4-218ENST00000560099 USH2AO75445 5202 aa7.79□□□□□ -1.16
PSMA4-218ENST00000560099 KMT2DO14686 5537 aa7.7□□□□□ -1.18
PSMA4-218ENST00000560099 KRTAP19-5Q3LI72 72 aa7.69□□□□□ -1.18
PSMA4-218ENST00000560099 LCE2AQ5TA79 106 aaPredicted RBP7.65□□□□□ -1.18
PSMA4-218ENST00000560099 KRTAP4-8A0A0G2JLE6 195 aa7.57□□□□□ -1.2
PSMA4-218ENST00000560099 KRTAP4-8Q9BYQ9 185 aa7.57□□□□□ -1.2
PSMA4-218ENST00000560099 LCE3CQ5T5A8 94 aa7.53□□□□□ -1.2
PSMA4-218ENST00000560099 KRTAP19-7Q3SYF9 63 aa7.36□□□□□ -1.23
PSMA4-218ENST00000560099 INE1O15225 51 aa7.35□□□□□ -1.23
PSMA4-218ENST00000560099 KRTAP9-6A8MVA2 160 aa7.33□□□□□ -1.24
PSMA4-218ENST00000560099 KRTAP4-7Q9BYR0 210 aa7.26□□□□□ -1.25
PSMA4-218ENST00000560099 SSPOA2VEC9 5147 aa7.22□□□□□ -1.25
PSMA4-218ENST00000560099 MT1LQ93083 61 aa7.13□□□□□ -1.27
PSMA4-218ENST00000560099 MT1EP04732 61 aa7.13□□□□□ -1.27
PSMA4-218ENST00000560099 KRTAP2-3P0C7H8 128 aa7.02□□□□□ -1.29
PSMA4-218ENST00000560099 KRTAP2-4Q9BYR9 128 aa7.02□□□□□ -1.29
PSMA4-218ENST00000560099 KRTAP2-1Q9BYU5 128 aa7.02□□□□□ -1.29
PSMA4-218ENST00000560099 FSIP2Q5CZC0 6907 aa7.02□□□□□ -1.29
PSMA4-218ENST00000560099 KRTAP19-4Q3LI73 84 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms