RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 FAM236BA0A1B0GV22 79 aa5.69□□□□□ -1.5
RABGGTA-207ENST00000558936 LINC00208Q96KT6 92 aa5.69□□□□□ -1.5
RABGGTA-207ENST00000558936 SPRR2GQ9BYE4 73 aa5.69□□□□□ -1.5
RABGGTA-207ENST00000558936 KRTAP19-8Q3LI54 63 aa5.67□□□□□ -1.5
RABGGTA-207ENST00000558936 MACF1Q9UPN3 7388 aaKnown RBP5.66□□□□□ -1.5
RABGGTA-207ENST00000558936 MT-ATP8P03928 68 aa5.66□□□□□ -1.5
RABGGTA-207ENST00000558936 J3QR89 54 aa5.65□□□□□ -1.5
RABGGTA-207ENST00000558936 MP68P56378 58 aa5.61□□□□□ -1.51
RABGGTA-207ENST00000558936 A8MUN3 132 aa5.6□□□□□ -1.51
RABGGTA-207ENST00000558936 SYNE2Q8WXH0 6885 aaKnown RBP5.59□□□□□ -1.51
RABGGTA-207ENST00000558936 NDUFC1O43677 76 aa5.58□□□□□ -1.52
RABGGTA-207ENST00000558936 Q5VV11 94 aa5.57□□□□□ -1.52
RABGGTA-207ENST00000558936 IMUPQ9GZP8 106 aa5.56□□□□□ -1.52
RABGGTA-207ENST00000558936 H0YAA0 97 aa5.55□□□□□ -1.52
RABGGTA-207ENST00000558936 H3BPC8 53 aa5.55□□□□□ -1.52
RABGGTA-207ENST00000558936 CRIPTQ9P021 101 aa5.54□□□□□ -1.52
RABGGTA-207ENST00000558936 SCGB1A1P11684 91 aa5.53□□□□□ -1.52
RABGGTA-207ENST00000558936 DMAC1Q96GE9 116 aa5.52□□□□□ -1.53
RABGGTA-207ENST00000558936 KRTAP3-2Q9BYR7 98 aa5.51□□□□□ -1.53
RABGGTA-207ENST00000558936 K7ERU9 68 aa5.5□□□□□ -1.53
RABGGTA-207ENST00000558936 KRTAP10-5P60370 271 aa5.49□□□□□ -1.53
RABGGTA-207ENST00000558936 ADM2Q7Z4H4 148 aa5.49□□□□□ -1.53
RABGGTA-207ENST00000558936 A6NN06 94 aa5.48□□□□□ -1.53
RABGGTA-207ENST00000558936 P0C880 135 aa5.48□□□□□ -1.53
RABGGTA-207ENST00000558936 TRAV7A0A075B6U4 112 aa5.46□□□□□ -1.54
RABGGTA-207ENST00000558936 KRTAP6-3Q3LI67 103 aa5.44□□□□□ -1.54
RABGGTA-207ENST00000558936 SMIM20Q8N5G0 67 aa5.41□□□□□ -1.54
RABGGTA-207ENST00000558936 SNURFQ9Y675 71 aa5.4□□□□□ -1.54
RABGGTA-207ENST00000558936 KMT2DO14686 5537 aa5.37□□□□□ -1.55
RABGGTA-207ENST00000558936 MT1XP80297 61 aa5.37□□□□□ -1.55
RABGGTA-207ENST00000558936 MUC12Q9UKN1 5478 aa5.36□□□□□ -1.55
RABGGTA-207ENST00000558936 ACYP2P14621 99 aa5.33□□□□□ -1.56
RABGGTA-207ENST00000558936 C20orf197Q8N268 126 aa5.32□□□□□ -1.56
RABGGTA-207ENST00000558936 R4GN34 69 aa5.32□□□□□ -1.56
RABGGTA-207ENST00000558936 SERP2Q8N6R1 65 aa5.3□□□□□ -1.56
RABGGTA-207ENST00000558936 CYSTM1Q9H1C7 97 aa5.3□□□□□ -1.56
RABGGTA-207ENST00000558936 M0QZ58 72 aa5.29□□□□□ -1.56
RABGGTA-207ENST00000558936 PLAC4Q8WY50 150 aa5.26□□□□□ -1.57
RABGGTA-207ENST00000558936 SPANXA2-OT1Q8N9U9 137 aa5.25□□□□□ -1.57
RABGGTA-207ENST00000558936 NEBP20929 6669 aa5.25□□□□□ -1.57
RABGGTA-207ENST00000558936 KRTAP5-9P26371 169 aa5.24□□□□□ -1.57
RABGGTA-207ENST00000558936 SPTSSBQ8NFR3 76 aa5.24□□□□□ -1.57
RABGGTA-207ENST00000558936 KRTAP13-4Q3LI77 160 aa5.22□□□□□ -1.57
RABGGTA-207ENST00000558936 PRO2289Q9P1D8 64 aa5.22□□□□□ -1.57
RABGGTA-207ENST00000558936 CHKB-CPT1BH3BT56 60 aa5.21□□□□□ -1.58
RABGGTA-207ENST00000558936 LINC01554Q52M75 96 aa5.2□□□□□ -1.58
RABGGTA-207ENST00000558936 COX7CP15954 63 aa5.18□□□□□ -1.58
RABGGTA-207ENST00000558936 KRTAP4-8A0A0G2JLE6 195 aa5.16□□□□□ -1.58
RABGGTA-207ENST00000558936 H7BZZ5 65 aa5.16□□□□□ -1.58
RABGGTA-207ENST00000558936 KRTAP4-8Q9BYQ9 185 aa5.16□□□□□ -1.58
RABGGTA-207ENST00000558936 MDN1Q9NU22 5596 aa5.15□□□□□ -1.58
RABGGTA-207ENST00000558936 KRTAP10-7P60409 375 aaPredicted RBP5.14□□□□□ -1.59
RABGGTA-207ENST00000558936 KRTAP12-2P59991 146 aa5.13□□□□□ -1.59
RABGGTA-207ENST00000558936 COA5Q86WW8 74 aa5.13□□□□□ -1.59
RABGGTA-207ENST00000558936 KRTAP10-12P60413 245 aa5.07□□□□□ -1.6
RABGGTA-207ENST00000558936 KRTAP8-1Q8IUC2 63 aa5.05□□□□□ -1.6
RABGGTA-207ENST00000558936 SPRR2FQ96RM1 72 aa5.05□□□□□ -1.6
RABGGTA-207ENST00000558936 CCDC179H3BU77 68 aa5.03□□□□□ -1.6
RABGGTA-207ENST00000558936 KRTAP20-1Q3LI63 56 aa4.99□□□□□ -1.61
RABGGTA-207ENST00000558936 LCE1AQ5T7P2 110 aa4.97□□□□□ -1.61
RABGGTA-207ENST00000558936 SPATA8Q6RVD6 105 aa4.97□□□□□ -1.61
RABGGTA-207ENST00000558936 ANAPC13Q9BS18 74 aa4.97□□□□□ -1.61
RABGGTA-207ENST00000558936 SPRR2EP22531 72 aa4.96□□□□□ -1.62
RABGGTA-207ENST00000558936 SPRR2BP35325 72 aa4.96□□□□□ -1.62
RABGGTA-207ENST00000558936 SPRR2AP35326 72 aa4.96□□□□□ -1.62
RABGGTA-207ENST00000558936 SERP1Q9Y6X1 66 aa4.93□□□□□ -1.62
RABGGTA-207ENST00000558936 SEC61GP60059 68 aa4.92□□□□□ -1.62
RABGGTA-207ENST00000558936 A0A0D9SG42 100 aa4.89□□□□□ -1.63
RABGGTA-207ENST00000558936 KRTAP2-3P0C7H8 128 aa4.89□□□□□ -1.63
RABGGTA-207ENST00000558936 KRTAP12-1P59990 96 aa4.89□□□□□ -1.63
RABGGTA-207ENST00000558936 CAMK2N1Q7Z7J9 78 aa4.89□□□□□ -1.63
RABGGTA-207ENST00000558936 KRTAP2-4Q9BYR9 128 aa4.89□□□□□ -1.63
RABGGTA-207ENST00000558936 A0A1B0GU33 70 aa4.88□□□□□ -1.63
RABGGTA-207ENST00000558936 A8MU10 97 aa4.83□□□□□ -1.64
RABGGTA-207ENST00000558936 KRTAP19-7Q3SYF9 63 aa4.83□□□□□ -1.64
RABGGTA-207ENST00000558936 A0A1B0GU69 56 aa4.8□□□□□ -1.64
RABGGTA-207ENST00000558936 SPRR2DP22532 72 aa4.8□□□□□ -1.64
RABGGTA-207ENST00000558936 SPINT4Q6UDR6 99 aa4.8□□□□□ -1.64
RABGGTA-207ENST00000558936 ATP5EP56381 51 aaPredicted RBP4.74□□□□□ -1.65
RABGGTA-207ENST00000558936 SMIM26A0A096LP01 95 aa4.73□□□□□ -1.65
RABGGTA-207ENST00000558936 MT1EP04732 61 aa4.73□□□□□ -1.65
RABGGTA-207ENST00000558936 KRTAP2-2Q9BYT5 123 aa4.73□□□□□ -1.65
RABGGTA-207ENST00000558936 KRTAP2-1Q9BYU5 128 aa4.73□□□□□ -1.65
RABGGTA-207ENST00000558936 LINC01558Q9Y6Z2 57 aa4.73□□□□□ -1.65
RABGGTA-207ENST00000558936 C10orf95Q9H7T3 257 aa4.72□□□□□ -1.65
RABGGTA-207ENST00000558936 TMEM258P61165 79 aa4.68□□□□□ -1.66
RABGGTA-207ENST00000558936 LCE5AQ5TCM9 118 aa4.68□□□□□ -1.66
RABGGTA-207ENST00000558936 LCE3BQ5TA77 95 aa4.67□□□□□ -1.66
RABGGTA-207ENST00000558936 KRTAP19-5Q3LI72 72 aa4.66□□□□□ -1.66
RABGGTA-207ENST00000558936 PRR15LQ9BU68 103 aa4.65□□□□□ -1.67
RABGGTA-207ENST00000558936 KRTAP19-3Q7Z4W3 81 aa4.62□□□□□ -1.67
RABGGTA-207ENST00000558936 LCE3AQ5TA76 89 aa4.59□□□□□ -1.67
RABGGTA-207ENST00000558936 DSTQ03001 7570 aaKnown RBP4.56□□□□□ -1.68
RABGGTA-207ENST00000558936 TNP1P09430 55 aa4.53□□□□□ -1.68
RABGGTA-207ENST00000558936 MT1LQ93083 61 aa4.53□□□□□ -1.68
RABGGTA-207ENST00000558936 UQCR11O14957 56 aa4.52□□□□□ -1.69
RABGGTA-207ENST00000558936 MT1GP13640 62 aa4.51□□□□□ -1.69
RABGGTA-207ENST00000558936 MT1MQ8N339 61 aa4.49□□□□□ -1.69
RABGGTA-207ENST00000558936 KRTAP4-3Q9BYR4 195 aa4.48□□□□□ -1.69
RABGGTA-207ENST00000558936 Q1T7F1 81 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms