RNA–Protein interactions for RNA: ENST00000558777.5

RMDN3-207, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 2

Gene RMDN3, Length 2,139 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-207ENST00000558777 DMBT1Q9UGM3 2413 aaPredicted RBP8.88□□□□□ -0.99
RMDN3-207ENST00000558777 MYCBP2O75592 4640 aa8.84□□□□□ -0.99
RMDN3-207ENST00000558777 A0A1B0GU33 70 aa8.78□□□□□ -1
RMDN3-207ENST00000558777 H0YAA0 97 aa8.78□□□□□ -1
RMDN3-207ENST00000558777 H1FX-AS1Q4G0G2 97 aa8.77□□□□□ -1.01
RMDN3-207ENST00000558777 KRTAP3-3Q9BYR6 98 aa8.74□□□□□ -1.01
RMDN3-207ENST00000558777 EPPK1P58107 5090 aaKnown RBP8.73□□□□□ -1.01
RMDN3-207ENST00000558777 TPRXLQ17RH7 258 aa8.69□□□□□ -1.02
RMDN3-207ENST00000558777 RBM12B-AS1Q9P1G2 102 aa8.68□□□□□ -1.02
RMDN3-207ENST00000558777 S4R3F8 94 aa8.66□□□□□ -1.02
RMDN3-207ENST00000558777 ADM2Q7Z4H4 148 aa8.63□□□□□ -1.03
RMDN3-207ENST00000558777 PRAC1Q96KF2 57 aa8.62□□□□□ -1.03
RMDN3-207ENST00000558777 KRTAP10-6P60371 365 aaPredicted RBP8.61□□□□□ -1.03
RMDN3-207ENST00000558777 KRTAP4-5Q9BYR2 181 aa8.6□□□□□ -1.03
RMDN3-207ENST00000558777 LPAP08519 4548 aa8.58□□□□□ -1.04
RMDN3-207ENST00000558777 KRTAP3-2Q9BYR7 98 aa8.57□□□□□ -1.04
RMDN3-207ENST00000558777 LRP2P98164 4655 aa8.57□□□□□ -1.04
RMDN3-207ENST00000558777 ABCA13Q86UQ4 5058 aa8.48□□□□□ -1.05
RMDN3-207ENST00000558777 KRTAP13-4Q3LI77 160 aa8.47□□□□□ -1.05
RMDN3-207ENST00000558777 K7ERS5 55 aa8.44□□□□□ -1.06
RMDN3-207ENST00000558777 P0C880 135 aa8.44□□□□□ -1.06
RMDN3-207ENST00000558777 CSAG1Q6PB30 78 aa8.41□□□□□ -1.06
RMDN3-207ENST00000558777 SEC61BP60468 96 aaKnown RBP8.35□□□□□ -1.07
RMDN3-207ENST00000558777 A0A0D9SG42 100 aa8.35□□□□□ -1.07
RMDN3-207ENST00000558777 J3QL48 77 aa8.32□□□□□ -1.08
RMDN3-207ENST00000558777 LINC01554Q52M75 96 aa8.29□□□□□ -1.08
RMDN3-207ENST00000558777 MUC17Q685J3 4493 aa8.27□□□□□ -1.08
RMDN3-207ENST00000558777 HERC2O95714 4834 aa8.27□□□□□ -1.09
RMDN3-207ENST00000558777 KRTAP25-1Q3LHN0 102 aa8.24□□□□□ -1.09
RMDN3-207ENST00000558777 ROMO1P60602 79 aa8.23□□□□□ -1.09
RMDN3-207ENST00000558777 KRTAP4-1Q9BYQ7 146 aa8.23□□□□□ -1.09
RMDN3-207ENST00000558777 M0QZ58 72 aa8.21□□□□□ -1.1
RMDN3-207ENST00000558777 KRTAP12-2P59991 146 aa8.18□□□□□ -1.1
RMDN3-207ENST00000558777 KRTAP12-1P59990 96 aa8.15□□□□□ -1.1
RMDN3-207ENST00000558777 BIRC6Q9NR09 4857 aa8.14□□□□□ -1.11
RMDN3-207ENST00000558777 KRTAP19-2Q3LHN2 52 aa8.11□□□□□ -1.11
RMDN3-207ENST00000558777 CRIPTQ9P021 101 aa8.11□□□□□ -1.11
RMDN3-207ENST00000558777 SPINT4Q6UDR6 99 aa8.09□□□□□ -1.11
RMDN3-207ENST00000558777 R4GN34 69 aa8.02□□□□□ -1.13
RMDN3-207ENST00000558777 LORP23490 312 aaPredicted RBP7.96□□□□□ -1.13
RMDN3-207ENST00000558777 C10orf95Q9H7T3 257 aa7.88□□□□□ -1.15
RMDN3-207ENST00000558777 MUC2Q02817 5179 aa7.86□□□□□ -1.15
RMDN3-207ENST00000558777 FLGP20930 4061 aaPredicted RBP7.85□□□□□ -1.15
RMDN3-207ENST00000558777 HMCN2Q8NDA2 5059 aa7.84□□□□□ -1.15
RMDN3-207ENST00000558777 HERC1Q15751 4861 aa7.83□□□□□ -1.16
RMDN3-207ENST00000558777 PCLOQ9Y6V0 5065 aa7.8□□□□□ -1.16
RMDN3-207ENST00000558777 LCE2CQ5TA81 110 aa7.68□□□□□ -1.18
RMDN3-207ENST00000558777 CAMK2N1Q7Z7J9 78 aa7.57□□□□□ -1.2
RMDN3-207ENST00000558777 FAT4Q6V0I7 4981 aa7.51□□□□□ -1.21
RMDN3-207ENST00000558777 KRTAP15-1Q3LI76 137 aa7.47□□□□□ -1.21
RMDN3-207ENST00000558777 MT1HP80294 61 aa7.46□□□□□ -1.21
RMDN3-207ENST00000558777 RNF213Q63HN8 5207 aa7.45□□□□□ -1.22
RMDN3-207ENST00000558777 SPRR2GQ9BYE4 73 aa7.43□□□□□ -1.22
RMDN3-207ENST00000558777 M0R2T5 61 aa7.42□□□□□ -1.22
RMDN3-207ENST00000558777 UBR4Q5T4S7 5183 aa7.4□□□□□ -1.22
RMDN3-207ENST00000558777 PP632Q6XCG6 107 aa7.39□□□□□ -1.23
RMDN3-207ENST00000558777 KRTAP19-1Q8IUB9 90 aa7.39□□□□□ -1.23
RMDN3-207ENST00000558777 MT2AP02795 61 aa7.31□□□□□ -1.24
RMDN3-207ENST00000558777 MT1FP04733 61 aa7.3□□□□□ -1.24
RMDN3-207ENST00000558777 TNP1P09430 55 aa7.3□□□□□ -1.24
RMDN3-207ENST00000558777 PLAC4Q8WY50 150 aa7.29□□□□□ -1.24
RMDN3-207ENST00000558777 KRTAP9-8Q9BYQ0 159 aa7.29□□□□□ -1.24
RMDN3-207ENST00000558777 KRTAP10-10P60014 251 aa7.27□□□□□ -1.25
RMDN3-207ENST00000558777 KRTAP23-1A1A580 65 aa7.23□□□□□ -1.25
RMDN3-207ENST00000558777 H3BS24 57 aa7.22□□□□□ -1.25
RMDN3-207ENST00000558777 NDUFAF8A1L188 74 aa7.15□□□□□ -1.26
RMDN3-207ENST00000558777 KRTAP19-8Q3LI54 63 aa7.14□□□□□ -1.27
RMDN3-207ENST00000558777 MT1BP07438 61 aa7.03□□□□□ -1.28
RMDN3-207ENST00000558777 KRTAP9-3Q9BYQ3 159 aa7□□□□□ -1.29
RMDN3-207ENST00000558777 KRTAP10-5P60370 271 aa6.94□□□□□ -1.3
RMDN3-207ENST00000558777 MT1XP80297 61 aa6.94□□□□□ -1.3
RMDN3-207ENST00000558777 LCE3AQ5TA76 89 aa6.93□□□□□ -1.3
RMDN3-207ENST00000558777 LUZP6Q538Z0 58 aa6.83□□□□□ -1.32
RMDN3-207ENST00000558777 SPRR5A0A1B0GTR4 108 aa6.83□□□□□ -1.32
RMDN3-207ENST00000558777 KRTAP8-1Q8IUC2 63 aa6.8□□□□□ -1.32
RMDN3-207ENST00000558777 LCE2AQ5TA79 106 aaPredicted RBP6.75□□□□□ -1.33
RMDN3-207ENST00000558777 KRTAP10-12P60413 245 aa6.73□□□□□ -1.33
RMDN3-207ENST00000558777 A0A0A0MQY5 61 aa6.72□□□□□ -1.33
RMDN3-207ENST00000558777 LCE2BO14633 110 aa6.72□□□□□ -1.33
RMDN3-207ENST00000558777 PRO2289Q9P1D8 64 aa6.71□□□□□ -1.34
RMDN3-207ENST00000558777 KRTAP10-7P60409 375 aaPredicted RBP6.7□□□□□ -1.34
RMDN3-207ENST00000558777 KRTAP12-3P60328 96 aa6.62□□□□□ -1.35
RMDN3-207ENST00000558777 USH2AO75445 5202 aa6.47□□□□□ -1.37
RMDN3-207ENST00000558777 KRTAP19-5Q3LI72 72 aa6.4□□□□□ -1.38
RMDN3-207ENST00000558777 KRTAP4-8A0A0G2JLE6 195 aa6.31□□□□□ -1.4
RMDN3-207ENST00000558777 KRTAP4-8Q9BYQ9 185 aa6.31□□□□□ -1.4
RMDN3-207ENST00000558777 KMT2DO14686 5537 aa6.27□□□□□ -1.41
RMDN3-207ENST00000558777 LCE3CQ5T5A8 94 aa6.23□□□□□ -1.41
RMDN3-207ENST00000558777 KRTAP19-7Q3SYF9 63 aa6.19□□□□□ -1.42
RMDN3-207ENST00000558777 SSPOA2VEC9 5147 aa6.17□□□□□ -1.42
RMDN3-207ENST00000558777 KRTAP19-6Q3LI70 58 aa6.13□□□□□ -1.43
RMDN3-207ENST00000558777 KRTAP19-4Q3LI73 84 aa6.03□□□□□ -1.44
RMDN3-207ENST00000558777 MT1EP04732 61 aa6.02□□□□□ -1.45
RMDN3-207ENST00000558777 MT1LQ93083 61 aa5.99□□□□□ -1.45
RMDN3-207ENST00000558777 KRTAP9-6A8MVA2 160 aa5.98□□□□□ -1.45
RMDN3-207ENST00000558777 KRTAP4-7Q9BYR0 210 aa5.95□□□□□ -1.46
RMDN3-207ENST00000558777 LCE2DQ5TA82 110 aaPredicted RBP5.87□□□□□ -1.47
RMDN3-207ENST00000558777 FSIP2Q5CZC0 6907 aa5.86□□□□□ -1.47
RMDN3-207ENST00000558777 INE1O15225 51 aa5.83□□□□□ -1.48
RMDN3-207ENST00000558777 FCGBPQ9Y6R7 5405 aaPredicted RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms