RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 M0QZ58 72 aa8.18□□□□□ -1.1
HMBOX1-212ENST00000558662 HYDINQ4G0P3 5121 aa8.17□□□□□ -1.1
HMBOX1-212ENST00000558662 DNAH5Q8TE73 4624 aa8.16□□□□□ -1.1
HMBOX1-212ENST00000558662 FAT2Q9NYQ8 4349 aa8.13□□□□□ -1.11
HMBOX1-212ENST00000558662 LUZP6Q538Z0 58 aa8.12□□□□□ -1.11
HMBOX1-212ENST00000558662 LRP1BQ9NZR2 4599 aa8.1□□□□□ -1.11
HMBOX1-212ENST00000558662 VPS13BQ7Z7G8 4022 aa8.08□□□□□ -1.12
HMBOX1-212ENST00000558662 PKD1P98161 4303 aa8.07□□□□□ -1.12
HMBOX1-212ENST00000558662 RYR2Q92736 4967 aa8.05□□□□□ -1.12
HMBOX1-212ENST00000558662 A0A1B0GVY2 172 aa8.01□□□□□ -1.13
HMBOX1-212ENST00000558662 PLAC4Q8WY50 150 aa7.99□□□□□ -1.13
HMBOX1-212ENST00000558662 PKHD1L1Q86WI1 4243 aa7.99□□□□□ -1.13
HMBOX1-212ENST00000558662 KMT2CQ8NEZ4 4911 aaKnown RBP7.96□□□□□ -1.14
HMBOX1-212ENST00000558662 DMBT1Q9UGM3 2413 aaPredicted RBP7.93□□□□□ -1.14
HMBOX1-212ENST00000558662 DYNC1H1Q14204 4646 aaKnown RBP7.9□□□□□ -1.14
HMBOX1-212ENST00000558662 KRTAP10-4P60372 401 aaPredicted RBP7.89□□□□□ -1.15
HMBOX1-212ENST00000558662 KRTAP10-8P60410 259 aa7.87□□□□□ -1.15
HMBOX1-212ENST00000558662 PP632Q6XCG6 107 aa7.87□□□□□ -1.15
HMBOX1-212ENST00000558662 PKHD1P08F94 4074 aa7.86□□□□□ -1.15
HMBOX1-212ENST00000558662 RYR3Q15413 4870 aa7.81□□□□□ -1.16
HMBOX1-212ENST00000558662 APOBP04114 4563 aaKnown RBP7.8□□□□□ -1.16
HMBOX1-212ENST00000558662 SMR3BP02814 79 aaPredicted RBP7.76□□□□□ -1.17
HMBOX1-212ENST00000558662 R4GN34 69 aa7.67□□□□□ -1.18
HMBOX1-212ENST00000558662 SEC61BP60468 96 aaKnown RBP7.66□□□□□ -1.18
HMBOX1-212ENST00000558662 LRP1Q07954 4544 aaKnown RBP7.64□□□□□ -1.19
HMBOX1-212ENST00000558662 FAT1Q14517 4588 aa7.63□□□□□ -1.19
HMBOX1-212ENST00000558662 TNXBP22105 4242 aa7.6□□□□□ -1.19
HMBOX1-212ENST00000558662 RYR1P21817 5038 aa7.59□□□□□ -1.19
HMBOX1-212ENST00000558662 HSPG2P98160 4391 aa7.58□□□□□ -1.2
HMBOX1-212ENST00000558662 KRTAP23-1A1A580 65 aa7.54□□□□□ -1.2
HMBOX1-212ENST00000558662 KRTAP17-1Q9BYP8 105 aa7.54□□□□□ -1.2
HMBOX1-212ENST00000558662 FAT3Q8TDW7 4589 aa7.53□□□□□ -1.2
HMBOX1-212ENST00000558662 Q5VSD8 79 aa7.51□□□□□ -1.21
HMBOX1-212ENST00000558662 EPPK1P58107 5090 aaKnown RBP7.5□□□□□ -1.21
HMBOX1-212ENST00000558662 CAMK2N1Q7Z7J9 78 aa7.48□□□□□ -1.21
HMBOX1-212ENST00000558662 KIAA1109Q2LD37 5005 aa7.47□□□□□ -1.21
HMBOX1-212ENST00000558662 SPRR5A0A1B0GTR4 108 aa7.46□□□□□ -1.22
HMBOX1-212ENST00000558662 MYCBP2O75592 4640 aa7.34□□□□□ -1.23
HMBOX1-212ENST00000558662 PRO2289Q9P1D8 64 aa7.31□□□□□ -1.24
HMBOX1-212ENST00000558662 MT1HL1P0DM35 61 aa7.31□□□□□ -1.24
HMBOX1-212ENST00000558662 BIRC6Q9NR09 4857 aa7.3□□□□□ -1.24
HMBOX1-212ENST00000558662 KRTAP4-5Q9BYR2 181 aa7.28□□□□□ -1.24
HMBOX1-212ENST00000558662 TNP1P09430 55 aa7.25□□□□□ -1.25
HMBOX1-212ENST00000558662 HERC2O95714 4834 aa7.24□□□□□ -1.25
HMBOX1-212ENST00000558662 LORP23490 312 aaPredicted RBP7.21□□□□□ -1.25
HMBOX1-212ENST00000558662 INE1O15225 51 aa7.2□□□□□ -1.26
HMBOX1-212ENST00000558662 ABCA13Q86UQ4 5058 aa7.11□□□□□ -1.27
HMBOX1-212ENST00000558662 J3QL48 77 aa6.94□□□□□ -1.3
HMBOX1-212ENST00000558662 LRP2P98164 4655 aa6.86□□□□□ -1.31
HMBOX1-212ENST00000558662 LPAP08519 4548 aa6.85□□□□□ -1.31
HMBOX1-212ENST00000558662 KRTAP19-2Q3LHN2 52 aa6.85□□□□□ -1.31
HMBOX1-212ENST00000558662 PCLOQ9Y6V0 5065 aa6.83□□□□□ -1.32
HMBOX1-212ENST00000558662 FLGP20930 4061 aaPredicted RBP6.75□□□□□ -1.33
HMBOX1-212ENST00000558662 MUC17Q685J3 4493 aa6.74□□□□□ -1.33
HMBOX1-212ENST00000558662 KRTAP4-1Q9BYQ7 146 aa6.73□□□□□ -1.33
HMBOX1-212ENST00000558662 HMCN2Q8NDA2 5059 aa6.67□□□□□ -1.34
HMBOX1-212ENST00000558662 HERC1Q15751 4861 aa6.66□□□□□ -1.34
HMBOX1-212ENST00000558662 KRTAP8-1Q8IUC2 63 aa6.63□□□□□ -1.35
HMBOX1-212ENST00000558662 LCE3AQ5TA76 89 aa6.62□□□□□ -1.35
HMBOX1-212ENST00000558662 SPRR2GQ9BYE4 73 aa6.62□□□□□ -1.35
HMBOX1-212ENST00000558662 KRTAP19-1Q8IUB9 90 aa6.41□□□□□ -1.38
HMBOX1-212ENST00000558662 KRTAP12-3P60328 96 aa6.36□□□□□ -1.39
HMBOX1-212ENST00000558662 KRTAP10-12P60413 245 aa6.34□□□□□ -1.39
HMBOX1-212ENST00000558662 LCE2CQ5TA81 110 aa6.3□□□□□ -1.4
HMBOX1-212ENST00000558662 RNF213Q63HN8 5207 aa6.25□□□□□ -1.41
HMBOX1-212ENST00000558662 MUC2Q02817 5179 aa6.25□□□□□ -1.41
HMBOX1-212ENST00000558662 UBR4Q5T4S7 5183 aa6.25□□□□□ -1.41
HMBOX1-212ENST00000558662 KRTAP19-8Q3LI54 63 aa6.24□□□□□ -1.41
HMBOX1-212ENST00000558662 KRTAP10-10P60014 251 aa6.23□□□□□ -1.41
HMBOX1-212ENST00000558662 KRTAP10-5P60370 271 aa6.18□□□□□ -1.42
HMBOX1-212ENST00000558662 MT1HP80294 61 aa6.13□□□□□ -1.43
HMBOX1-212ENST00000558662 FAT4Q6V0I7 4981 aa6.09□□□□□ -1.43
HMBOX1-212ENST00000558662 MT1XP80297 61 aa6.09□□□□□ -1.43
HMBOX1-212ENST00000558662 LCE3CQ5T5A8 94 aa6.04□□□□□ -1.44
HMBOX1-212ENST00000558662 MT2AP02795 61 aa6.01□□□□□ -1.45
HMBOX1-212ENST00000558662 M0R2T5 61 aa6.01□□□□□ -1.45
HMBOX1-212ENST00000558662 MT1FP04733 61 aa5.99□□□□□ -1.45
HMBOX1-212ENST00000558662 MT1BP07438 61 aa5.98□□□□□ -1.45
HMBOX1-212ENST00000558662 KRTAP19-4Q3LI73 84 aa5.97□□□□□ -1.45
HMBOX1-212ENST00000558662 KRTAP2-3P0C7H8 128 aa5.95□□□□□ -1.46
HMBOX1-212ENST00000558662 KRTAP2-4Q9BYR9 128 aa5.95□□□□□ -1.46
HMBOX1-212ENST00000558662 KRTAP2-1Q9BYU5 128 aa5.95□□□□□ -1.46
HMBOX1-212ENST00000558662 KRTAP9-8Q9BYQ0 159 aa5.93□□□□□ -1.46
HMBOX1-212ENST00000558662 LCE2AQ5TA79 106 aaPredicted RBP5.92□□□□□ -1.46
HMBOX1-212ENST00000558662 KRTAP10-7P60409 375 aaPredicted RBP5.88□□□□□ -1.47
HMBOX1-212ENST00000558662 KRTAP19-5Q3LI72 72 aa5.8□□□□□ -1.48
HMBOX1-212ENST00000558662 KRTAP9-3Q9BYQ3 159 aa5.72□□□□□ -1.49
HMBOX1-212ENST00000558662 KRTAP9-6A8MVA2 160 aa5.69□□□□□ -1.5
HMBOX1-212ENST00000558662 LCE2BO14633 110 aa5.55□□□□□ -1.52
HMBOX1-212ENST00000558662 LCE2DQ5TA82 110 aaPredicted RBP5.44□□□□□ -1.54
HMBOX1-212ENST00000558662 KRTAP19-7Q3SYF9 63 aa5.42□□□□□ -1.54
HMBOX1-212ENST00000558662 MT1LQ93083 61 aa5.35□□□□□ -1.55
HMBOX1-212ENST00000558662 USH2AO75445 5202 aa5.32□□□□□ -1.56
HMBOX1-212ENST00000558662 MT1EP04732 61 aa5.3□□□□□ -1.56
HMBOX1-212ENST00000558662 KRTAP4-8A0A0G2JLE6 195 aa5.27□□□□□ -1.57
HMBOX1-212ENST00000558662 KRTAP12-4P60329 112 aa5.27□□□□□ -1.57
HMBOX1-212ENST00000558662 KRTAP4-8Q9BYQ9 185 aa5.27□□□□□ -1.57
HMBOX1-212ENST00000558662 KRTAP4-7Q9BYR0 210 aa5.27□□□□□ -1.57
HMBOX1-212ENST00000558662 KRTAP19-6Q3LI70 58 aa5.21□□□□□ -1.57
HMBOX1-212ENST00000558662 SSPOA2VEC9 5147 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms