RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 LCA10Q71F78 164 aa10.15□□□□□ -0.78
SNRPA1-205ENST00000558036 S4R3F8 94 aa10.12□□□□□ -0.79
SNRPA1-205ENST00000558036 Q1T7F1 81 aa10.1□□□□□ -0.79
SNRPA1-205ENST00000558036 KRTAP19-2Q3LHN2 52 aa10.1□□□□□ -0.79
SNRPA1-205ENST00000558036 KRTAP3-3Q9BYR6 98 aa10.1□□□□□ -0.79
SNRPA1-205ENST00000558036 PSPHP1O15172 72 aa10.04□□□□□ -0.8
SNRPA1-205ENST00000558036 SPTSSBQ8NFR3 76 aa10.03□□□□□ -0.8
SNRPA1-205ENST00000558036 FAT4Q6V0I7 4981 aa10.02□□□□□ -0.81
SNRPA1-205ENST00000558036 LINC01558Q9Y6Z2 57 aa10.01□□□□□ -0.81
SNRPA1-205ENST00000558036 V9GYY9 64 aa10.01□□□□□ -0.81
SNRPA1-205ENST00000558036 PRR15LQ9BU68 103 aa10□□□□□ -0.81
SNRPA1-205ENST00000558036 FLGP20930 4061 aaPredicted RBP9.93□□□□□ -0.82
SNRPA1-205ENST00000558036 A0A1B0GU69 56 aa9.91□□□□□ -0.82
SNRPA1-205ENST00000558036 Q5VV11 94 aa9.9□□□□□ -0.82
SNRPA1-205ENST00000558036 LCE2CQ5TA81 110 aa9.89□□□□□ -0.83
SNRPA1-205ENST00000558036 CSAG1Q6PB30 78 aa9.88□□□□□ -0.83
SNRPA1-205ENST00000558036 SEC61GP60059 68 aa9.81□□□□□ -0.84
SNRPA1-205ENST00000558036 KRTAP3-2Q9BYR7 98 aa9.73□□□□□ -0.85
SNRPA1-205ENST00000558036 KRTAP10-6P60371 365 aaPredicted RBP9.71□□□□□ -0.85
SNRPA1-205ENST00000558036 ADM2Q7Z4H4 148 aa9.71□□□□□ -0.85
SNRPA1-205ENST00000558036 P0C880 135 aa9.69□□□□□ -0.86
SNRPA1-205ENST00000558036 A6NED7 52 aa9.68□□□□□ -0.86
SNRPA1-205ENST00000558036 MT1HP80294 61 aa9.68□□□□□ -0.86
SNRPA1-205ENST00000558036 M0R2T5 61 aa9.62□□□□□ -0.87
SNRPA1-205ENST00000558036 A0A1B0GU33 70 aa9.61□□□□□ -0.87
SNRPA1-205ENST00000558036 H0YAA0 97 aa9.59□□□□□ -0.87
SNRPA1-205ENST00000558036 BRK1Q8WUW1 75 aa9.59□□□□□ -0.87
SNRPA1-205ENST00000558036 A8MU10 97 aa9.59□□□□□ -0.87
SNRPA1-205ENST00000558036 UQCR11O14957 56 aa9.58□□□□□ -0.88
SNRPA1-205ENST00000558036 SPATA8Q6RVD6 105 aa9.53□□□□□ -0.88
SNRPA1-205ENST00000558036 KRTAP13-4Q3LI77 160 aa9.5□□□□□ -0.89
SNRPA1-205ENST00000558036 MIR22HGQ0VDD5 57 aa9.49□□□□□ -0.89
SNRPA1-205ENST00000558036 LORP23490 312 aaPredicted RBP9.47□□□□□ -0.89
SNRPA1-205ENST00000558036 CDC42SE1Q9NRR8 79 aa9.46□□□□□ -0.9
SNRPA1-205ENST00000558036 M0QZ58 72 aa9.35□□□□□ -0.91
SNRPA1-205ENST00000558036 A0A0D9SG42 100 aa9.34□□□□□ -0.91
SNRPA1-205ENST00000558036 R4GN34 69 aa9.34□□□□□ -0.91
SNRPA1-205ENST00000558036 KRTAP9-8Q9BYQ0 159 aa9.32□□□□□ -0.92
SNRPA1-205ENST00000558036 MT2AP02795 61 aa9.3□□□□□ -0.92
SNRPA1-205ENST00000558036 PRO0628Q9UI54 55 aa9.29□□□□□ -0.92
SNRPA1-205ENST00000558036 LCE2AQ5TA79 106 aaPredicted RBP9.29□□□□□ -0.92
SNRPA1-205ENST00000558036 MT1FP04733 61 aa9.27□□□□□ -0.93
SNRPA1-205ENST00000558036 LINC01554Q52M75 96 aa9.26□□□□□ -0.93
SNRPA1-205ENST00000558036 KRTAP10-10P60014 251 aa9.23□□□□□ -0.93
SNRPA1-205ENST00000558036 CRIPTQ9P021 101 aa9.16□□□□□ -0.94
SNRPA1-205ENST00000558036 KRTAP12-2P59991 146 aa9.1□□□□□ -0.95
SNRPA1-205ENST00000558036 KRTAP12-1P59990 96 aa9.08□□□□□ -0.96
SNRPA1-205ENST00000558036 SPINT4Q6UDR6 99 aa9.08□□□□□ -0.96
SNRPA1-205ENST00000558036 KRTAP19-1Q8IUB9 90 aa9.08□□□□□ -0.96
SNRPA1-205ENST00000558036 SPRR2GQ9BYE4 73 aa9.05□□□□□ -0.96
SNRPA1-205ENST00000558036 PMAIP1Q13794 54 aa9.04□□□□□ -0.96
SNRPA1-205ENST00000558036 K7ERS5 55 aa9□□□□□ -0.97
SNRPA1-205ENST00000558036 KRTAP9-3Q9BYQ3 159 aa8.98□□□□□ -0.97
SNRPA1-205ENST00000558036 A6NN06 94 aa8.97□□□□□ -0.97
SNRPA1-205ENST00000558036 KRTAP19-8Q3LI54 63 aa8.8□□□□□ -1
SNRPA1-205ENST00000558036 LCE2BO14633 110 aa8.77□□□□□ -1.01
SNRPA1-205ENST00000558036 CAMK2N1Q7Z7J9 78 aa8.76□□□□□ -1.01
SNRPA1-205ENST00000558036 PLAC4Q8WY50 150 aa8.75□□□□□ -1.01
SNRPA1-205ENST00000558036 MT1BP07438 61 aa8.75□□□□□ -1.01
SNRPA1-205ENST00000558036 USH2AO75445 5202 aa8.72□□□□□ -1.01
SNRPA1-205ENST00000558036 SVIPQ8NHG7 77 aa8.68□□□□□ -1.02
SNRPA1-205ENST00000558036 ROMO1P60602 79 aa8.68□□□□□ -1.02
SNRPA1-205ENST00000558036 KTN1-AS1Q86SY8 53 aa8.62□□□□□ -1.03
SNRPA1-205ENST00000558036 C10orf95Q9H7T3 257 aa8.61□□□□□ -1.03
SNRPA1-205ENST00000558036 PRAC1Q96KF2 57 aa8.55□□□□□ -1.04
SNRPA1-205ENST00000558036 FSIP2Q5CZC0 6907 aa8.49□□□□□ -1.05
SNRPA1-205ENST00000558036 MT1XP80297 61 aa8.47□□□□□ -1.05
SNRPA1-205ENST00000558036 KRTAP10-5P60370 271 aa8.45□□□□□ -1.06
SNRPA1-205ENST00000558036 SSPOA2VEC9 5147 aa8.4□□□□□ -1.06
SNRPA1-205ENST00000558036 LCE2DQ5TA82 110 aaPredicted RBP8.36□□□□□ -1.07
SNRPA1-205ENST00000558036 PRO2289Q9P1D8 64 aa8.29□□□□□ -1.08
SNRPA1-205ENST00000558036 TNP1P09430 55 aa8.29□□□□□ -1.08
SNRPA1-205ENST00000558036 KRTAP25-1Q3LHN0 102 aa8.28□□□□□ -1.08
SNRPA1-205ENST00000558036 KRTAP10-7P60409 375 aaPredicted RBP8.17□□□□□ -1.1
SNRPA1-205ENST00000558036 KRTAP19-6Q3LI70 58 aa8.15□□□□□ -1.11
SNRPA1-205ENST00000558036 KRTAP9-2Q9BYQ4 174 aa8.15□□□□□ -1.11
SNRPA1-205ENST00000558036 KMT2DO14686 5537 aa8.05□□□□□ -1.12
SNRPA1-205ENST00000558036 FCGBPQ9Y6R7 5405 aaPredicted RBP8.02□□□□□ -1.13
SNRPA1-205ENST00000558036 KRTAP10-12P60413 245 aa8.02□□□□□ -1.13
SNRPA1-205ENST00000558036 LCE3AQ5TA76 89 aa8.02□□□□□ -1.13
SNRPA1-205ENST00000558036 PP632Q6XCG6 107 aa7.96□□□□□ -1.13
SNRPA1-205ENST00000558036 KRTAP23-1A1A580 65 aa7.92□□□□□ -1.14
SNRPA1-205ENST00000558036 KRTAP4-8A0A0G2JLE6 195 aa7.89□□□□□ -1.15
SNRPA1-205ENST00000558036 KRTAP4-8Q9BYQ9 185 aa7.89□□□□□ -1.15
SNRPA1-205ENST00000558036 CRCT1Q9UGL9 99 aa7.84□□□□□ -1.16
SNRPA1-205ENST00000558036 KRTAP8-1Q8IUC2 63 aa7.77□□□□□ -1.17
SNRPA1-205ENST00000558036 MACF1Q9UPN3 7388 aaKnown RBP7.69□□□□□ -1.18
SNRPA1-205ENST00000558036 KRTAP19-5Q3LI72 72 aa7.67□□□□□ -1.18
SNRPA1-205ENST00000558036 KRTAP12-3P60328 96 aa7.66□□□□□ -1.18
SNRPA1-205ENST00000558036 KRTAP19-7Q3SYF9 63 aa7.56□□□□□ -1.2
SNRPA1-205ENST00000558036 SYNE2Q8WXH0 6885 aaKnown RBP7.49□□□□□ -1.21
SNRPA1-205ENST00000558036 KRTAP15-1Q3LI76 137 aa7.48□□□□□ -1.21
SNRPA1-205ENST00000558036 KRTAP9-6A0A140TA67 174 aa7.48□□□□□ -1.21
SNRPA1-205ENST00000558036 MUC12Q9UKN1 5478 aa7.43□□□□□ -1.22
SNRPA1-205ENST00000558036 MT1EP04732 61 aa7.4□□□□□ -1.22
SNRPA1-205ENST00000558036 SPRR2FQ96RM1 72 aa7.32□□□□□ -1.24
SNRPA1-205ENST00000558036 MT1LQ93083 61 aa7.26□□□□□ -1.25
SNRPA1-205ENST00000558036 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.25□□□□□ -1.25
SNRPA1-205ENST00000558036 MDN1Q9NU22 5596 aa7.2□□□□□ -1.26
SNRPA1-205ENST00000558036 KRTAP5-9P26371 169 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms