RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 TOMM5Q8N4H5 51 aa1.13□□□□□ -2.23
FOXN3-217ENST00000557572 PRO0255Q9UI72 69 aa1.13□□□□□ -2.23
FOXN3-217ENST00000557572 HSPG2P98160 4391 aa1.12□□□□□ -2.23
FOXN3-217ENST00000557572 HMCN2Q8NDA2 5059 aa1.12□□□□□ -2.23
FOXN3-217ENST00000557572 USMG5Q96IX5 58 aa1.12□□□□□ -2.23
FOXN3-217ENST00000557572 NDUFA3O95167 84 aa1.11□□□□□ -2.23
FOXN3-217ENST00000557572 CDKN2A-AS1Q9UH64 79 aa1.11□□□□□ -2.23
FOXN3-217ENST00000557572 SSPOA2VEC9 5147 aa1.1□□□□□ -2.23
FOXN3-217ENST00000557572 HUWE1Q7Z6Z7 4374 aaKnown RBP1.1□□□□□ -2.23
FOXN3-217ENST00000557572 MYCBP2O75592 4640 aa1.1□□□□□ -2.23
FOXN3-217ENST00000557572 PLNP26678 52 aa1.1□□□□□ -2.23
FOXN3-217ENST00000557572 PRB3Q04118 309 aaPredicted RBP1.1□□□□□ -2.23
FOXN3-217ENST00000557572 Q8IZM0 81 aa1.09□□□□□ -2.23
FOXN3-217ENST00000557572 DNAH3Q8TD57 4116 aa1.08□□□□□ -2.24
FOXN3-217ENST00000557572 DNAH9Q9NYC9 4486 aa1.08□□□□□ -2.24
FOXN3-217ENST00000557572 SMIM27A0A1W2PRY6 76 aa1.08□□□□□ -2.24
FOXN3-217ENST00000557572 H0YAA0 97 aa1.08□□□□□ -2.24
FOXN3-217ENST00000557572 MRPL33O75394 65 aaKnown RBP1.08□□□□□ -2.24
FOXN3-217ENST00000557572 STATHP02808 62 aa1.08□□□□□ -2.24
FOXN3-217ENST00000557572 SPRR1AP35321 89 aa1.08□□□□□ -2.24
FOXN3-217ENST00000557572 SERF2P84101 59 aa1.08□□□□□ -2.24
FOXN3-217ENST00000557572 TFF3Q07654 80 aa1.08□□□□□ -2.24
FOXN3-217ENST00000557572 ABRACLQ9P1F3 81 aa1.08□□□□□ -2.24
FOXN3-217ENST00000557572 U3KQA8 63 aa1.08□□□□□ -2.24
FOXN3-217ENST00000557572 STARD9Q9P2P6 4700 aa1.07□□□□□ -2.24
FOXN3-217ENST00000557572 DYNC1H1Q14204 4646 aaKnown RBP1.06□□□□□ -2.24
FOXN3-217ENST00000557572 DEFB133Q30KQ1 61 aa1.06□□□□□ -2.24
FOXN3-217ENST00000557572 KRTAP5-10Q6L8G5 202 aa1.06□□□□□ -2.24
FOXN3-217ENST00000557572 DSTQ03001 7570 aaKnown RBP1.06□□□□□ -2.24
FOXN3-217ENST00000557572 FAT2Q9NYQ8 4349 aa1.06□□□□□ -2.24
FOXN3-217ENST00000557572 MUC5BQ9HC84 5762 aaPredicted RBP1.05□□□□□ -2.24
FOXN3-217ENST00000557572 LRP2P98164 4655 aa1.05□□□□□ -2.24
FOXN3-217ENST00000557572 LINC01546A6NGU7 62 aa1.05□□□□□ -2.24
FOXN3-217ENST00000557572 CCL22O00626 93 aa1.05□□□□□ -2.24
FOXN3-217ENST00000557572 LINC00158P58513 81 aa1.05□□□□□ -2.24
FOXN3-217ENST00000557572 H1FX-AS1Q4G0G2 97 aa1.05□□□□□ -2.24
FOXN3-217ENST00000557572 COX6B2Q6YFQ2 88 aa1.05□□□□□ -2.24
FOXN3-217ENST00000557572 APLNQ9ULZ1 77 aa1.05□□□□□ -2.24
FOXN3-217ENST00000557572 VPS13BQ7Z7G8 4022 aa1.05□□□□□ -2.24
FOXN3-217ENST00000557572 KRTAP20-1Q3LI63 56 aa1.04□□□□□ -2.24
FOXN3-217ENST00000557572 Q5VSD8 79 aa1.04□□□□□ -2.24
FOXN3-217ENST00000557572 TIMM8BQ9Y5J9 83 aaPredicted RBP1.04□□□□□ -2.24
FOXN3-217ENST00000557572 SPINK4O60575 86 aa1.03□□□□□ -2.24
FOXN3-217ENST00000557572 SPRR1BP22528 89 aa1.03□□□□□ -2.24
FOXN3-217ENST00000557572 DEFB105AQ8NG35 78 aa1.03□□□□□ -2.24
FOXN3-217ENST00000557572 DNAH10Q8IVF4 4471 aa1.03□□□□□ -2.24
FOXN3-217ENST00000557572 PLECQ15149 4684 aaKnown RBP1.03□□□□□ -2.24
FOXN3-217ENST00000557572 ALMS1Q8TCU4 4167 aa1.03□□□□□ -2.25
FOXN3-217ENST00000557572 DNAH6Q9C0G6 4158 aa1.02□□□□□ -2.25
FOXN3-217ENST00000557572 LYNX1G3V0Z9 82 aa1.01□□□□□ -2.25
FOXN3-217ENST00000557572 H0YGX0 51 aa1.01□□□□□ -2.25
FOXN3-217ENST00000557572 KLK9Q2XQG4 91 aa1.01□□□□□ -2.25
FOXN3-217ENST00000557572 WFDC13Q8IUB5 93 aa1.01□□□□□ -2.25
FOXN3-217ENST00000557572 APOBP04114 4563 aaKnown RBP1□□□□□ -2.25
FOXN3-217ENST00000557572 LINC00308Q8TCZ7 52 aa1□□□□□ -2.25
FOXN3-217ENST00000557572 PKD1P98161 4303 aa0.99□□□□□ -2.25
FOXN3-217ENST00000557572 PKHD1L1Q86WI1 4243 aa0.98□□□□□ -2.25
FOXN3-217ENST00000557572 KMT2DO14686 5537 aa0.98□□□□□ -2.25
FOXN3-217ENST00000557572 MINOS1Q5TGZ0 78 aa0.97□□□□□ -2.25
FOXN3-217ENST00000557572 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
FOXN3-217ENST00000557572 DEFB108AA8MXU0 73 aa0.96□□□□□ -2.26
FOXN3-217ENST00000557572 DEFB130BP0DP73 79 aa0.96□□□□□ -2.26
FOXN3-217ENST00000557572 DEFB130AP0DP74 79 aa0.96□□□□□ -2.26
FOXN3-217ENST00000557572 IAPPP10997 89 aa0.96□□□□□ -2.26
FOXN3-217ENST00000557572 TMEM167BQ9NRX6 74 aa0.96□□□□□ -2.26
FOXN3-217ENST00000557572 LRP1Q07954 4544 aaKnown RBP0.96□□□□□ -2.26
FOXN3-217ENST00000557572 RPS27P42677 84 aaKnown RBP0.95□□□□□ -2.26
FOXN3-217ENST00000557572 RPS27LQ71UM5 84 aaKnown RBP0.95□□□□□ -2.26
FOXN3-217ENST00000557572 USH2AO75445 5202 aa0.95□□□□□ -2.26
FOXN3-217ENST00000557572 FAT1Q14517 4588 aa0.94□□□□□ -2.26
FOXN3-217ENST00000557572 MUC12Q9UKN1 5478 aa0.94□□□□□ -2.26
FOXN3-217ENST00000557572 KRTAP2-3P0C7H8 128 aa0.94□□□□□ -2.26
FOXN3-217ENST00000557572 DEFB104AQ8WTQ1 72 aa0.94□□□□□ -2.26
FOXN3-217ENST00000557572 KRTAP2-4Q9BYR9 128 aa0.94□□□□□ -2.26
FOXN3-217ENST00000557572 C6orf48Q9UBA6 75 aa0.94□□□□□ -2.26
FOXN3-217ENST00000557572 MDN1Q9NU22 5596 aa0.94□□□□□ -2.26
FOXN3-217ENST00000557572 DNAH2Q9P225 4427 aa0.94□□□□□ -2.26
FOXN3-217ENST00000557572 VPS13DQ5THJ4 4388 aa0.94□□□□□ -2.26
FOXN3-217ENST00000557572 DNAH11Q96DT5 4516 aa0.93□□□□□ -2.26
FOXN3-217ENST00000557572 FAT3Q8TDW7 4589 aa0.93□□□□□ -2.26
FOXN3-217ENST00000557572 DNAH5Q8TE73 4624 aa0.93□□□□□ -2.26
FOXN3-217ENST00000557572 DNAH17Q9UFH2 4485 aa0.93□□□□□ -2.26
FOXN3-217ENST00000557572 LRP1BQ9NZR2 4599 aa0.9□□□□□ -2.27
FOXN3-217ENST00000557572 MUC5ACP98088 5654 aa0.89□□□□□ -2.27
FOXN3-217ENST00000557572 SMR3BP02814 79 aaPredicted RBP0.89□□□□□ -2.27
FOXN3-217ENST00000557572 KRTAP2-1Q9BYU5 128 aa0.89□□□□□ -2.27
FOXN3-217ENST00000557572 TNXBP22105 4242 aa0.89□□□□□ -2.27
FOXN3-217ENST00000557572 SMIM2Q9BVW6 85 aa0.88□□□□□ -2.27
FOXN3-217ENST00000557572 WT1-ASQ06250 92 aa0.86□□□□□ -2.27
FOXN3-217ENST00000557572 NDUFA1O15239 70 aa0.84□□□□□ -2.27
FOXN3-217ENST00000557572 SNRPGP62308 76 aaKnown RBP0.84□□□□□ -2.27
FOXN3-217ENST00000557572 S4R3F8 94 aa0.84□□□□□ -2.27
FOXN3-217ENST00000557572 LPAP08519 4548 aa0.84□□□□□ -2.28
FOXN3-217ENST00000557572 WFDC10BQ8IUB3 73 aa0.83□□□□□ -2.28
FOXN3-217ENST00000557572 MT1HL1P0DM35 61 aa0.82□□□□□ -2.28
FOXN3-217ENST00000557572 DEFB108BQ8NET1 73 aa0.82□□□□□ -2.28
FOXN3-217ENST00000557572 KAAG1Q9UBP8 84 aa0.82□□□□□ -2.28
FOXN3-217ENST00000557572 DEFB110Q30KQ9 67 aa0.8□□□□□ -2.28
FOXN3-217ENST00000557572 KRTAP19-3Q7Z4W3 81 aa0.8□□□□□ -2.28
FOXN3-217ENST00000557572 DEFB106AQ8N104 65 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms