RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 KRTAP3-1Q9BYR8 98 aa5.58□□□□□ -1.52
FOXN3-212ENST00000556541 NDUFC1O43677 76 aa5.56□□□□□ -1.52
FOXN3-212ENST00000556541 SPANXA2-OT1Q8N9U9 137 aa5.56□□□□□ -1.52
FOXN3-212ENST00000556541 SNURFQ9Y675 71 aa5.55□□□□□ -1.52
FOXN3-212ENST00000556541 DMAC1Q96GE9 116 aa5.53□□□□□ -1.52
FOXN3-212ENST00000556541 H7BZZ5 65 aa5.48□□□□□ -1.53
FOXN3-212ENST00000556541 S4R3F8 94 aa5.48□□□□□ -1.53
FOXN3-212ENST00000556541 CCDC179H3BU77 68 aa5.45□□□□□ -1.54
FOXN3-212ENST00000556541 M0R2T5 61 aa5.45□□□□□ -1.54
FOXN3-212ENST00000556541 ACYP2P14621 99 aa5.45□□□□□ -1.54
FOXN3-212ENST00000556541 KRTAP10-6P60371 365 aaPredicted RBP5.43□□□□□ -1.54
FOXN3-212ENST00000556541 LCA10Q71F78 164 aa5.43□□□□□ -1.54
FOXN3-212ENST00000556541 CYSTM1Q9H1C7 97 aa5.43□□□□□ -1.54
FOXN3-212ENST00000556541 KRTAP9-7A8MTY7 169 aa5.41□□□□□ -1.54
FOXN3-212ENST00000556541 CSAG1Q6PB30 78 aa5.41□□□□□ -1.54
FOXN3-212ENST00000556541 ATP5EP56381 51 aaPredicted RBP5.4□□□□□ -1.54
FOXN3-212ENST00000556541 KRTAP9-8Q9BYQ0 159 aa5.36□□□□□ -1.55
FOXN3-212ENST00000556541 TMEM258P61165 79 aa5.35□□□□□ -1.55
FOXN3-212ENST00000556541 H0YAA0 97 aa5.34□□□□□ -1.55
FOXN3-212ENST00000556541 SPTSSBQ8NFR3 76 aa5.34□□□□□ -1.55
FOXN3-212ENST00000556541 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.32□□□□□ -1.56
FOXN3-212ENST00000556541 CHKB-CPT1BH3BT56 60 aa5.3□□□□□ -1.56
FOXN3-212ENST00000556541 MT2AP02795 61 aa5.3□□□□□ -1.56
FOXN3-212ENST00000556541 COA5Q86WW8 74 aa5.3□□□□□ -1.56
FOXN3-212ENST00000556541 PCP4P48539 62 aa5.29□□□□□ -1.56
FOXN3-212ENST00000556541 MT1FP04733 61 aa5.25□□□□□ -1.57
FOXN3-212ENST00000556541 KRTAP10-10P60014 251 aa5.22□□□□□ -1.57
FOXN3-212ENST00000556541 CRIPTQ9P021 101 aa5.21□□□□□ -1.58
FOXN3-212ENST00000556541 SYNE2Q8WXH0 6885 aaKnown RBP5.2□□□□□ -1.58
FOXN3-212ENST00000556541 KRTAP9-3Q9BYQ3 159 aa5.18□□□□□ -1.58
FOXN3-212ENST00000556541 SERP1Q9Y6X1 66 aa5.17□□□□□ -1.58
FOXN3-212ENST00000556541 SSPOA2VEC9 5147 aa5.16□□□□□ -1.58
FOXN3-212ENST00000556541 ADM2Q7Z4H4 148 aa5.16□□□□□ -1.58
FOXN3-212ENST00000556541 USH2AO75445 5202 aa5.16□□□□□ -1.58
FOXN3-212ENST00000556541 SPRR2GQ9BYE4 73 aa5.13□□□□□ -1.59
FOXN3-212ENST00000556541 FCGBPQ9Y6R7 5405 aaPredicted RBP5.11□□□□□ -1.59
FOXN3-212ENST00000556541 KRTAP23-1A1A580 65 aa5.11□□□□□ -1.59
FOXN3-212ENST00000556541 MACF1Q9UPN3 7388 aaKnown RBP5.11□□□□□ -1.59
FOXN3-212ENST00000556541 P0C880 135 aa5.09□□□□□ -1.59
FOXN3-212ENST00000556541 RPS28P62857 69 aaKnown RBP5.09□□□□□ -1.59
FOXN3-212ENST00000556541 KRTAP19-1Q8IUB9 90 aa5.09□□□□□ -1.59
FOXN3-212ENST00000556541 SEC61GP60059 68 aa5.08□□□□□ -1.6
FOXN3-212ENST00000556541 KRTAP19-4Q3LI73 84 aa5.07□□□□□ -1.6
FOXN3-212ENST00000556541 LINC01558Q9Y6Z2 57 aa5.06□□□□□ -1.6
FOXN3-212ENST00000556541 M0QZ58 72 aa5.04□□□□□ -1.6
FOXN3-212ENST00000556541 KRTAP19-8Q3LI54 63 aa5.04□□□□□ -1.6
FOXN3-212ENST00000556541 R4GN34 69 aa5.03□□□□□ -1.6
FOXN3-212ENST00000556541 A0A1B0GU69 56 aa5.02□□□□□ -1.61
FOXN3-212ENST00000556541 V9GYY9 64 aa5.02□□□□□ -1.61
FOXN3-212ENST00000556541 Q5VV11 94 aa5.01□□□□□ -1.61
FOXN3-212ENST00000556541 PRR15LQ9BU68 103 aa5.01□□□□□ -1.61
FOXN3-212ENST00000556541 SMIM26A0A096LP01 95 aa4.99□□□□□ -1.61
FOXN3-212ENST00000556541 Q1T7F1 81 aa4.98□□□□□ -1.61
FOXN3-212ENST00000556541 A0A1B0GU33 70 aa4.95□□□□□ -1.62
FOXN3-212ENST00000556541 A6NN06 94 aa4.94□□□□□ -1.62
FOXN3-212ENST00000556541 MT1BP07438 61 aa4.94□□□□□ -1.62
FOXN3-212ENST00000556541 KRTAP13-4Q3LI77 160 aa4.9□□□□□ -1.63
FOXN3-212ENST00000556541 KRTAP19-6Q3LI70 58 aa4.88□□□□□ -1.63
FOXN3-212ENST00000556541 NEBP20929 6669 aa4.87□□□□□ -1.63
FOXN3-212ENST00000556541 LOC100996750A0A140TA64 210 aa4.86□□□□□ -1.63
FOXN3-212ENST00000556541 KRTAP4-6Q9BYQ5 205 aa4.86□□□□□ -1.63
FOXN3-212ENST00000556541 UQCR11O14957 56 aa4.85□□□□□ -1.63
FOXN3-212ENST00000556541 PLAC4Q8WY50 150 aa4.84□□□□□ -1.63
FOXN3-212ENST00000556541 LINC01554Q52M75 96 aa4.83□□□□□ -1.64
FOXN3-212ENST00000556541 SPATA8Q6RVD6 105 aa4.82□□□□□ -1.64
FOXN3-212ENST00000556541 PSPHP1O15172 72 aa4.8□□□□□ -1.64
FOXN3-212ENST00000556541 KRTAP10-5P60370 271 aa4.78□□□□□ -1.64
FOXN3-212ENST00000556541 KRTAP6-3Q3LI67 103 aa4.77□□□□□ -1.65
FOXN3-212ENST00000556541 PRO2289Q9P1D8 64 aa4.75□□□□□ -1.65
FOXN3-212ENST00000556541 KRTAP12-1P59990 96 aa4.74□□□□□ -1.65
FOXN3-212ENST00000556541 MIR22HGQ0VDD5 57 aa4.74□□□□□ -1.65
FOXN3-212ENST00000556541 MUC12Q9UKN1 5478 aa4.73□□□□□ -1.65
FOXN3-212ENST00000556541 A0A0D9SG42 100 aa4.73□□□□□ -1.65
FOXN3-212ENST00000556541 MT1XP80297 61 aa4.72□□□□□ -1.65
FOXN3-212ENST00000556541 A8MU10 97 aa4.71□□□□□ -1.66
FOXN3-212ENST00000556541 A6NED7 52 aa4.69□□□□□ -1.66
FOXN3-212ENST00000556541 KRTAP12-2P59991 146 aa4.68□□□□□ -1.66
FOXN3-212ENST00000556541 KRTAP20-1Q3LI63 56 aa4.68□□□□□ -1.66
FOXN3-212ENST00000556541 SPINT4Q6UDR6 99 aa4.66□□□□□ -1.66
FOXN3-212ENST00000556541 CAMK2N1Q7Z7J9 78 aa4.65□□□□□ -1.67
FOXN3-212ENST00000556541 KRTAP4-12Q9BQ66 201 aa4.65□□□□□ -1.67
FOXN3-212ENST00000556541 KRTAP4-8Q9BYQ9 185 aa4.64□□□□□ -1.67
FOXN3-212ENST00000556541 CDC42SE1Q9NRR8 79 aa4.63□□□□□ -1.67
FOXN3-212ENST00000556541 K7ERS5 55 aa4.61□□□□□ -1.67
FOXN3-212ENST00000556541 A0A0A0MQY5 61 aa4.6□□□□□ -1.67
FOXN3-212ENST00000556541 KRTAP10-12P60413 245 aa4.52□□□□□ -1.69
FOXN3-212ENST00000556541 MDN1Q9NU22 5596 aa4.52□□□□□ -1.69
FOXN3-212ENST00000556541 LCE4AQ5TA78 99 aa4.49□□□□□ -1.69
FOXN3-212ENST00000556541 C10orf95Q9H7T3 257 aa4.48□□□□□ -1.69
FOXN3-212ENST00000556541 KMT2DO14686 5537 aa4.48□□□□□ -1.69
FOXN3-212ENST00000556541 KRTAP10-7P60409 375 aaPredicted RBP4.46□□□□□ -1.7
FOXN3-212ENST00000556541 TNP1P09430 55 aa4.43□□□□□ -1.7
FOXN3-212ENST00000556541 LCE3BQ5TA77 95 aa4.43□□□□□ -1.7
FOXN3-212ENST00000556541 BRK1Q8WUW1 75 aa4.42□□□□□ -1.7
FOXN3-212ENST00000556541 KRTAP15-1Q3LI76 137 aa4.41□□□□□ -1.7
FOXN3-212ENST00000556541 KRTAP2-3P0C7H8 128 aa4.4□□□□□ -1.71
FOXN3-212ENST00000556541 KRTAP25-1Q3LHN0 102 aa4.4□□□□□ -1.71
FOXN3-212ENST00000556541 KRTAP2-4Q9BYR9 128 aa4.4□□□□□ -1.71
FOXN3-212ENST00000556541 KRTAP5-9P26371 169 aa4.37□□□□□ -1.71
FOXN3-212ENST00000556541 ROMO1P60602 79 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms