RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 M0R2T5 61 aa4.54□□□□□ -1.68
ACTN1-218ENST00000556343 CSAG1Q6PB30 78 aa4.54□□□□□ -1.68
ACTN1-218ENST00000556343 COA5Q86WW8 74 aa4.54□□□□□ -1.68
ACTN1-218ENST00000556343 LCE2CQ5TA81 110 aa4.52□□□□□ -1.69
ACTN1-218ENST00000556343 LCA10Q71F78 164 aa4.52□□□□□ -1.69
ACTN1-218ENST00000556343 FAT4Q6V0I7 4981 aa4.52□□□□□ -1.69
ACTN1-218ENST00000556343 SERP1Q9Y6X1 66 aa4.51□□□□□ -1.69
ACTN1-218ENST00000556343 MT1HP80294 61 aa4.48□□□□□ -1.69
ACTN1-218ENST00000556343 KRTAP3-3Q9BYR6 98 aa4.45□□□□□ -1.7
ACTN1-218ENST00000556343 RPS28P62857 69 aaKnown RBP4.44□□□□□ -1.7
ACTN1-218ENST00000556343 SVIPQ8NHG7 77 aa4.44□□□□□ -1.7
ACTN1-218ENST00000556343 SEC61GP60059 68 aa4.43□□□□□ -1.7
ACTN1-218ENST00000556343 LCE2AQ5TA79 106 aaPredicted RBP4.39□□□□□ -1.71
ACTN1-218ENST00000556343 V9GYY9 64 aa4.39□□□□□ -1.71
ACTN1-218ENST00000556343 SMIM26A0A096LP01 95 aa4.38□□□□□ -1.71
ACTN1-218ENST00000556343 H0YAA0 97 aa4.38□□□□□ -1.71
ACTN1-218ENST00000556343 PRR15LQ9BU68 103 aa4.37□□□□□ -1.71
ACTN1-218ENST00000556343 KRTAP10-6P60371 365 aaPredicted RBP4.36□□□□□ -1.71
ACTN1-218ENST00000556343 ADM2Q7Z4H4 148 aa4.35□□□□□ -1.71
ACTN1-218ENST00000556343 A0A1B0GU69 56 aa4.34□□□□□ -1.71
ACTN1-218ENST00000556343 LINC01558Q9Y6Z2 57 aa4.33□□□□□ -1.72
ACTN1-218ENST00000556343 LORP23490 312 aaPredicted RBP4.31□□□□□ -1.72
ACTN1-218ENST00000556343 Q1T7F1 81 aa4.31□□□□□ -1.72
ACTN1-218ENST00000556343 KRTAP10-10P60014 251 aa4.3□□□□□ -1.72
ACTN1-218ENST00000556343 CRIPTQ9P021 101 aa4.3□□□□□ -1.72
ACTN1-218ENST00000556343 KRTAP9-8Q9BYQ0 159 aa4.28□□□□□ -1.72
ACTN1-218ENST00000556343 MT2AP02795 61 aa4.27□□□□□ -1.73
ACTN1-218ENST00000556343 KRTAP3-2Q9BYR7 98 aa4.26□□□□□ -1.73
ACTN1-218ENST00000556343 A0A1B0GU33 70 aa4.25□□□□□ -1.73
ACTN1-218ENST00000556343 P0C880 135 aa4.25□□□□□ -1.73
ACTN1-218ENST00000556343 R4GN34 69 aa4.24□□□□□ -1.73
ACTN1-218ENST00000556343 M0QZ58 72 aa4.23□□□□□ -1.73
ACTN1-218ENST00000556343 MT1FP04733 61 aa4.22□□□□□ -1.73
ACTN1-218ENST00000556343 PSPHP1O15172 72 aa4.21□□□□□ -1.74
ACTN1-218ENST00000556343 UQCR11O14957 56 aa4.2□□□□□ -1.74
ACTN1-218ENST00000556343 Q5VV11 94 aa4.16□□□□□ -1.74
ACTN1-218ENST00000556343 SPRR2GQ9BYE4 73 aa4.15□□□□□ -1.75
ACTN1-218ENST00000556343 A6NED7 52 aa4.14□□□□□ -1.75
ACTN1-218ENST00000556343 KRTAP9-3Q9BYQ3 159 aa4.14□□□□□ -1.75
ACTN1-218ENST00000556343 MIR22HGQ0VDD5 57 aa4.12□□□□□ -1.75
ACTN1-218ENST00000556343 LINC01554Q52M75 96 aa4.12□□□□□ -1.75
ACTN1-218ENST00000556343 SPATA8Q6RVD6 105 aa4.12□□□□□ -1.75
ACTN1-218ENST00000556343 LCE2DQ5TA82 110 aaPredicted RBP4.11□□□□□ -1.75
ACTN1-218ENST00000556343 KRTAP19-1Q8IUB9 90 aa4.1□□□□□ -1.75
ACTN1-218ENST00000556343 A0A0D9SG42 100 aa4.08□□□□□ -1.76
ACTN1-218ENST00000556343 KRTAP13-4Q3LI77 160 aa4.08□□□□□ -1.76
ACTN1-218ENST00000556343 PLAC4Q8WY50 150 aa4.08□□□□□ -1.76
ACTN1-218ENST00000556343 A6NN06 94 aa4.07□□□□□ -1.76
ACTN1-218ENST00000556343 PRO0628Q9UI54 55 aa4.07□□□□□ -1.76
ACTN1-218ENST00000556343 K7ERS5 55 aa4.05□□□□□ -1.76
ACTN1-218ENST00000556343 KRTAP19-8Q3LI54 63 aa4.05□□□□□ -1.76
ACTN1-218ENST00000556343 A8MU10 97 aa4.02□□□□□ -1.77
ACTN1-218ENST00000556343 LCE2BO14633 110 aa4.02□□□□□ -1.77
ACTN1-218ENST00000556343 SPINT4Q6UDR6 99 aa4.02□□□□□ -1.77
ACTN1-218ENST00000556343 CDC42SE1Q9NRR8 79 aa4.02□□□□□ -1.77
ACTN1-218ENST00000556343 BRK1Q8WUW1 75 aa4□□□□□ -1.77
ACTN1-218ENST00000556343 CAMK2N1Q7Z7J9 78 aa3.98□□□□□ -1.77
ACTN1-218ENST00000556343 KRTAP9-2Q9BYQ4 174 aa3.98□□□□□ -1.77
ACTN1-218ENST00000556343 MT1BP07438 61 aa3.96□□□□□ -1.78
ACTN1-218ENST00000556343 KRTAP12-1P59990 96 aa3.96□□□□□ -1.78
ACTN1-218ENST00000556343 KRTAP12-2P59991 146 aa3.93□□□□□ -1.78
ACTN1-218ENST00000556343 PRO2289Q9P1D8 64 aa3.93□□□□□ -1.78
ACTN1-218ENST00000556343 USH2AO75445 5202 aa3.91□□□□□ -1.78
ACTN1-218ENST00000556343 KRTAP19-6Q3LI70 58 aa3.86□□□□□ -1.79
ACTN1-218ENST00000556343 KRTAP10-5P60370 271 aa3.84□□□□□ -1.79
ACTN1-218ENST00000556343 CRCT1Q9UGL9 99 aa3.84□□□□□ -1.79
ACTN1-218ENST00000556343 PMAIP1Q13794 54 aa3.82□□□□□ -1.8
ACTN1-218ENST00000556343 MT1XP80297 61 aa3.81□□□□□ -1.8
ACTN1-218ENST00000556343 SSPOA2VEC9 5147 aa3.81□□□□□ -1.8
ACTN1-218ENST00000556343 ROMO1P60602 79 aa3.78□□□□□ -1.8
ACTN1-218ENST00000556343 FSIP2Q5CZC0 6907 aa3.78□□□□□ -1.8
ACTN1-218ENST00000556343 TNP1P09430 55 aa3.77□□□□□ -1.81
ACTN1-218ENST00000556343 C10orf95Q9H7T3 257 aa3.75□□□□□ -1.81
ACTN1-218ENST00000556343 KRTAP9-6A0A140TA67 174 aa3.74□□□□□ -1.81
ACTN1-218ENST00000556343 KRTAP25-1Q3LHN0 102 aa3.72□□□□□ -1.81
ACTN1-218ENST00000556343 KTN1-AS1Q86SY8 53 aa3.72□□□□□ -1.81
ACTN1-218ENST00000556343 FCGBPQ9Y6R7 5405 aaPredicted RBP3.69□□□□□ -1.82
ACTN1-218ENST00000556343 KRTAP10-12P60413 245 aa3.65□□□□□ -1.83
ACTN1-218ENST00000556343 KRTAP10-7P60409 375 aaPredicted RBP3.64□□□□□ -1.83
ACTN1-218ENST00000556343 KRTAP23-1A1A580 65 aa3.61□□□□□ -1.83
ACTN1-218ENST00000556343 PP632Q6XCG6 107 aa3.6□□□□□ -1.83
ACTN1-218ENST00000556343 KRTAP8-1Q8IUC2 63 aa3.55□□□□□ -1.84
ACTN1-218ENST00000556343 LCE3AQ5TA76 89 aa3.54□□□□□ -1.84
ACTN1-218ENST00000556343 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.53□□□□□ -1.84
ACTN1-218ENST00000556343 PRAC1Q96KF2 57 aa3.53□□□□□ -1.84
ACTN1-218ENST00000556343 KRTAP4-8A0A0G2JLE6 195 aa3.52□□□□□ -1.85
ACTN1-218ENST00000556343 KRTAP4-8Q9BYQ9 185 aa3.52□□□□□ -1.85
ACTN1-218ENST00000556343 KMT2DO14686 5537 aa3.47□□□□□ -1.85
ACTN1-218ENST00000556343 MACF1Q9UPN3 7388 aaKnown RBP3.46□□□□□ -1.85
ACTN1-218ENST00000556343 KRTAP6-3Q3LI67 103 aa3.46□□□□□ -1.86
ACTN1-218ENST00000556343 KRTAP12-3P60328 96 aa3.44□□□□□ -1.86
ACTN1-218ENST00000556343 KRTAP19-5Q3LI72 72 aa3.44□□□□□ -1.86
ACTN1-218ENST00000556343 SPRR2FQ96RM1 72 aa3.43□□□□□ -1.86
ACTN1-218ENST00000556343 KRTAP5-9P26371 169 aa3.41□□□□□ -1.86
ACTN1-218ENST00000556343 SYNE2Q8WXH0 6885 aaKnown RBP3.4□□□□□ -1.86
ACTN1-218ENST00000556343 KRTAP9-7A8MTY7 169 aa3.4□□□□□ -1.87
ACTN1-218ENST00000556343 KRTAP19-7Q3SYF9 63 aa3.39□□□□□ -1.87
ACTN1-218ENST00000556343 MT1EP04732 61 aa3.37□□□□□ -1.87
ACTN1-218ENST00000556343 KRTAP19-4Q3LI73 84 aa3.35□□□□□ -1.87
ACTN1-218ENST00000556343 KRTAP15-1Q3LI76 137 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms