RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 C3P01024 1663 aa-1.41□□□□□ -2.63
SRP54-207ENST00000555535 ADIRFQ15847 76 aa-1.41□□□□□ -2.64
SRP54-207ENST00000555535 DEFB121Q5J5C9 76 aa-1.41□□□□□ -2.64
SRP54-207ENST00000555535 ST20Q9HBF5 79 aa-1.41□□□□□ -2.64
SRP54-207ENST00000555535 PRUNE2Q8WUY3 3088 aa-1.41□□□□□ -2.64
SRP54-207ENST00000555535 SMARCA2P51531 1590 aa-1.42□□□□□ -2.64
SRP54-207ENST00000555535 ASXL1Q8IXJ9 1541 aa-1.43□□□□□ -2.64
SRP54-207ENST00000555535 ABCC6O95255 1503 aa-1.44□□□□□ -2.64
SRP54-207ENST00000555535 DCAF1Q9Y4B6 1507 aa-1.44□□□□□ -2.64
SRP54-207ENST00000555535 FAM208AQ9UK61 1670 aaKnown RBP-1.45□□□□□ -2.64
SRP54-207ENST00000555535 MT1BP07438 61 aa-1.45□□□□□ -2.64
SRP54-207ENST00000555535 SPART-AS1P0CW21 52 aa-1.45□□□□□ -2.64
SRP54-207ENST00000555535 MT1MQ8N339 61 aa-1.45□□□□□ -2.64
SRP54-207ENST00000555535 M0QZ58 72 aa-1.46□□□□□ -2.64
SRP54-207ENST00000555535 MT2AP02795 61 aa-1.46□□□□□ -2.64
SRP54-207ENST00000555535 KRTAP19-6Q3LI70 58 aa-1.46□□□□□ -2.64
SRP54-207ENST00000555535 S100A13Q99584 98 aa-1.46□□□□□ -2.64
SRP54-207ENST00000555535 DIP2AQ14689 1571 aa-1.47□□□□□ -2.64
SRP54-207ENST00000555535 DNMBPQ6XZF7 1577 aa-1.47□□□□□ -2.64
SRP54-207ENST00000555535 MADDQ8WXG6 1647 aa-1.47□□□□□ -2.64
SRP54-207ENST00000555535 DEFB4AO15263 64 aa-1.47□□□□□ -2.64
SRP54-207ENST00000555535 ABCC1P33527 1531 aa-1.47□□□□□ -2.64
SRP54-207ENST00000555535 FREM2Q5SZK8 3169 aa-1.47□□□□□ -2.65
SRP54-207ENST00000555535 CD163L1Q9NR16 1453 aa-1.48□□□□□ -2.65
SRP54-207ENST00000555535 CROCC2H7BZ55 1655 aa-1.48□□□□□ -2.65
SRP54-207ENST00000555535 CFAP74Q9C0B2 1584 aa-1.49□□□□□ -2.65
SRP54-207ENST00000555535 ABRACLQ9P1F3 81 aa-1.49□□□□□ -2.65
SRP54-207ENST00000555535 PREX2Q70Z35 1606 aa-1.5□□□□□ -2.65
SRP54-207ENST00000555535 A8MTW9 85 aa-1.5□□□□□ -2.65
SRP54-207ENST00000555535 KAAG1Q9UBP8 84 aa-1.5□□□□□ -2.65
SRP54-207ENST00000555535 CLASP1Q7Z460 1538 aa-1.5□□□□□ -2.65
SRP54-207ENST00000555535 RRBP1Q9P2E9 1410 aaKnown RBP-1.51□□□□□ -2.65
SRP54-207ENST00000555535 ZFHX4Q86UP3 3567 aa-1.52□□□□□ -2.65
SRP54-207ENST00000555535 CSMD2Q7Z408 3487 aa-1.53□□□□□ -2.65
SRP54-207ENST00000555535 MED14O60244 1454 aa-1.53□□□□□ -2.65
SRP54-207ENST00000555535 DEFB114Q30KQ6 69 aa-1.53□□□□□ -2.65
SRP54-207ENST00000555535 CRYBG3Q68DQ2 2970 aa-1.53□□□□□ -2.65
SRP54-207ENST00000555535 ANKARQ7Z5J8 1434 aa-1.53□□□□□ -2.65
SRP54-207ENST00000555535 C18orf32Q8TCD1 76 aa-1.53□□□□□ -2.65
SRP54-207ENST00000555535 ATXN8Q156A1 80 aa-1.54□□□□□ -2.66
SRP54-207ENST00000555535 GNG13Q9P2W3 67 aa-1.54□□□□□ -2.66
SRP54-207ENST00000555535 HILPDAQ9Y5L2 63 aa-1.54□□□□□ -2.66
SRP54-207ENST00000555535 TIAM1Q13009 1591 aa-1.55□□□□□ -2.66
SRP54-207ENST00000555535 ALS2Q96Q42 1657 aa-1.55□□□□□ -2.66
SRP54-207ENST00000555535 ABCA8O94911 1581 aa-1.55□□□□□ -2.66
SRP54-207ENST00000555535 MYO15AQ9UKN7 3530 aa-1.56□□□□□ -2.66
SRP54-207ENST00000555535 GLI2P10070 1586 aa-1.56□□□□□ -2.66
SRP54-207ENST00000555535 IQGAP3Q86VI3 1631 aa-1.57□□□□□ -2.66
SRP54-207ENST00000555535 ABCA9Q8IUA7 1624 aa-1.57□□□□□ -2.66
SRP54-207ENST00000555535 KIF21BO75037 1637 aa-1.58□□□□□ -2.66
SRP54-207ENST00000555535 GNG2P59768 71 aa-1.58□□□□□ -2.66
SRP54-207ENST00000555535 SPEGQ15772 3267 aa-1.58□□□□□ -2.66
SRP54-207ENST00000555535 CCDC18Q5T9S5 1454 aa-1.58□□□□□ -2.66
SRP54-207ENST00000555535 DMDP11532 3685 aa-1.59□□□□□ -2.66
SRP54-207ENST00000555535 SMIM27A0A1W2PRY6 76 aa-1.59□□□□□ -2.66
SRP54-207ENST00000555535 WFDC10BQ8IUB3 73 aa-1.59□□□□□ -2.66
SRP54-207ENST00000555535 LEAP2Q969E1 77 aa-1.6□□□□□ -2.67
SRP54-207ENST00000555535 RB1CC1Q8TDY2 1594 aa-1.6□□□□□ -2.67
SRP54-207ENST00000555535 CENPEQ02224 2701 aa-1.61□□□□□ -2.67
SRP54-207ENST00000555535 M0R1W7 72 aa-1.62□□□□□ -2.67
SRP54-207ENST00000555535 LINC00308Q8TCZ7 52 aa-1.63□□□□□ -2.67
SRP54-207ENST00000555535 CFAP54Q96N23 3096 aa-1.64□□□□□ -2.67
SRP54-207ENST00000555535 EFCAB6Q5THR3 1501 aa-1.64□□□□□ -2.67
SRP54-207ENST00000555535 LINC01549A6NIU2 74 aa-1.65□□□□□ -2.67
SRP54-207ENST00000555535 K7EMI3 77 aa-1.65□□□□□ -2.67
SRP54-207ENST00000555535 TMEM167BQ9NRX6 74 aa-1.65□□□□□ -2.67
SRP54-207ENST00000555535 CEP350Q5VT06 3117 aa-1.65□□□□□ -2.67
SRP54-207ENST00000555535 WDFY3Q8IZQ1 3526 aa-1.66□□□□□ -2.68
SRP54-207ENST00000555535 EEA1Q15075 1411 aa-1.66□□□□□ -2.68
SRP54-207ENST00000555535 POLR2KP53803 58 aaKnown RBP-1.67□□□□□ -2.68
SRP54-207ENST00000555535 DEFB136Q30KP8 78 aa-1.67□□□□□ -2.68
SRP54-207ENST00000555535 UGGT2Q9NYU1 1516 aa-1.68□□□□□ -2.68
SRP54-207ENST00000555535 FRYLO94915 3013 aa-1.69□□□□□ -2.68
SRP54-207ENST00000555535 VPS13CQ709C8 3753 aa-1.7□□□□□ -2.68
SRP54-207ENST00000555535 NMES1Q9C002 83 aa-1.7□□□□□ -2.68
SRP54-207ENST00000555535 ABCA6Q8N139 1617 aa-1.7□□□□□ -2.68
SRP54-207ENST00000555535 RPS29P62273 56 aaKnown RBP-1.71□□□□□ -2.68
SRP54-207ENST00000555535 DUOX2Q9NRD8 1548 aa-1.71□□□□□ -2.68
SRP54-207ENST00000555535 MT1FP04733 61 aa-1.72□□□□□ -2.68
SRP54-207ENST00000555535 SERF2P84101 59 aa-1.72□□□□□ -2.68
SRP54-207ENST00000555535 MROH2AA6NES4 1674 aa-1.72□□□□□ -2.68
SRP54-207ENST00000555535 LMO7Q8WWI1 1683 aa-1.72□□□□□ -2.68
SRP54-207ENST00000555535 WDFY4Q6ZS81 3184 aa-1.74□□□□□ -2.69
SRP54-207ENST00000555535 DCHS1Q96JQ0 3298 aa-1.74□□□□□ -2.69
SRP54-207ENST00000555535 EP400Q96L91 3159 aa-1.77□□□□□ -2.69
SRP54-207ENST00000555535 PCNTO95613 3336 aa-1.78□□□□□ -2.69
SRP54-207ENST00000555535 IGIPA6NJ69 53 aa-1.78□□□□□ -2.69
SRP54-207ENST00000555535 UGGT1Q9NYU2 1555 aa-1.79□□□□□ -2.7
SRP54-207ENST00000555535 DEFB131AP59861 70 aa-1.79□□□□□ -2.7
SRP54-207ENST00000555535 SZT2Q5T011 3432 aa-1.79□□□□□ -2.7
SRP54-207ENST00000555535 CCDC180Q9P1Z9 1646 aa-1.8□□□□□ -2.7
SRP54-207ENST00000555535 TFF3Q07654 80 aa-1.81□□□□□ -2.7
SRP54-207ENST00000555535 S100ZQ8WXG8 99 aa-1.81□□□□□ -2.7
SRP54-207ENST00000555535 SMCO4Q9NRQ5 59 aa-1.81□□□□□ -2.7
SRP54-207ENST00000555535 DDX60Q8IY21 1712 aaKnown RBP-1.81□□□□□ -2.7
SRP54-207ENST00000555535 SYCP2Q9BX26 1530 aa-1.81□□□□□ -2.7
SRP54-207ENST00000555535 MUC3AQ02505 3323 aa-1.82□□□□□ -2.7
SRP54-207ENST00000555535 MKI67P46013 3256 aaKnown RBP-1.83□□□□□ -2.7
SRP54-207ENST00000555535 H0YGX0 51 aa-1.83□□□□□ -2.7
SRP54-207ENST00000555535 PDCD5O14737 125 aa-1.83□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms