RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 ACYP2P14621 99 aa5.28□□□□□ -1.56
TDP1-211ENST00000555178 LCA10Q71F78 164 aa5.27□□□□□ -1.57
TDP1-211ENST00000555178 ATP5EP56381 51 aaPredicted RBP5.27□□□□□ -1.57
TDP1-211ENST00000555178 COA5Q86WW8 74 aa5.27□□□□□ -1.57
TDP1-211ENST00000555178 S4R3F8 94 aa5.25□□□□□ -1.57
TDP1-211ENST00000555178 KRTAP3-3Q9BYR6 98 aa5.25□□□□□ -1.57
TDP1-211ENST00000555178 CHKB-CPT1BH3BT56 60 aa5.21□□□□□ -1.57
TDP1-211ENST00000555178 M0R2T5 61 aa5.18□□□□□ -1.58
TDP1-211ENST00000555178 SERP1Q9Y6X1 66 aa5.18□□□□□ -1.58
TDP1-211ENST00000555178 KRTAP10-6P60371 365 aaPredicted RBP5.15□□□□□ -1.59
TDP1-211ENST00000555178 LORP23490 312 aaPredicted RBP5.13□□□□□ -1.59
TDP1-211ENST00000555178 CSAG1Q6PB30 78 aa5.12□□□□□ -1.59
TDP1-211ENST00000555178 KRTAP9-8Q9BYQ0 159 aa5.11□□□□□ -1.59
TDP1-211ENST00000555178 RPS28P62857 69 aaKnown RBP5.07□□□□□ -1.6
TDP1-211ENST00000555178 SPTSSBQ8NFR3 76 aa5.07□□□□□ -1.6
TDP1-211ENST00000555178 MT2AP02795 61 aa5.07□□□□□ -1.6
TDP1-211ENST00000555178 MT1FP04733 61 aa5.05□□□□□ -1.6
TDP1-211ENST00000555178 ADM2Q7Z4H4 148 aa5.03□□□□□ -1.6
TDP1-211ENST00000555178 KRTAP3-2Q9BYR7 98 aa5.02□□□□□ -1.61
TDP1-211ENST00000555178 SMIM26A0A096LP01 95 aa5.01□□□□□ -1.61
TDP1-211ENST00000555178 P0C880 135 aa5.01□□□□□ -1.61
TDP1-211ENST00000555178 LINC01558Q9Y6Z2 57 aa4.99□□□□□ -1.61
TDP1-211ENST00000555178 H0YAA0 97 aa4.97□□□□□ -1.61
TDP1-211ENST00000555178 KRTAP10-10P60014 251 aa4.97□□□□□ -1.61
TDP1-211ENST00000555178 A0A1B0GU69 56 aa4.96□□□□□ -1.62
TDP1-211ENST00000555178 Q1T7F1 81 aa4.96□□□□□ -1.62
TDP1-211ENST00000555178 PRR15LQ9BU68 103 aa4.96□□□□□ -1.62
TDP1-211ENST00000555178 PSPHP1O15172 72 aa4.95□□□□□ -1.62
TDP1-211ENST00000555178 SEC61GP60059 68 aa4.93□□□□□ -1.62
TDP1-211ENST00000555178 KRTAP9-3Q9BYQ3 159 aa4.92□□□□□ -1.62
TDP1-211ENST00000555178 V9GYY9 64 aa4.9□□□□□ -1.63
TDP1-211ENST00000555178 Q5VV11 94 aa4.89□□□□□ -1.63
TDP1-211ENST00000555178 KRTAP13-4Q3LI77 160 aa4.88□□□□□ -1.63
TDP1-211ENST00000555178 KRTAP19-1Q8IUB9 90 aa4.87□□□□□ -1.63
TDP1-211ENST00000555178 LCE2BO14633 110 aa4.87□□□□□ -1.63
TDP1-211ENST00000555178 A0A1B0GU33 70 aa4.85□□□□□ -1.63
TDP1-211ENST00000555178 SPATA8Q6RVD6 105 aa4.85□□□□□ -1.63
TDP1-211ENST00000555178 M0QZ58 72 aa4.84□□□□□ -1.64
TDP1-211ENST00000555178 R4GN34 69 aa4.83□□□□□ -1.64
TDP1-211ENST00000555178 USH2AO75445 5202 aa4.82□□□□□ -1.64
TDP1-211ENST00000555178 FSIP2Q5CZC0 6907 aa4.81□□□□□ -1.64
TDP1-211ENST00000555178 LCE2DQ5TA82 110 aaPredicted RBP4.81□□□□□ -1.64
TDP1-211ENST00000555178 KRTAP9-2Q9BYQ4 174 aa4.81□□□□□ -1.64
TDP1-211ENST00000555178 LINC01554Q52M75 96 aa4.79□□□□□ -1.64
TDP1-211ENST00000555178 SPRR2GQ9BYE4 73 aa4.79□□□□□ -1.64
TDP1-211ENST00000555178 CRIPTQ9P021 101 aa4.78□□□□□ -1.64
TDP1-211ENST00000555178 A8MU10 97 aa4.77□□□□□ -1.65
TDP1-211ENST00000555178 A0A0D9SG42 100 aa4.76□□□□□ -1.65
TDP1-211ENST00000555178 UQCR11O14957 56 aa4.76□□□□□ -1.65
TDP1-211ENST00000555178 A6NED7 52 aa4.76□□□□□ -1.65
TDP1-211ENST00000555178 MT1BP07438 61 aa4.73□□□□□ -1.65
TDP1-211ENST00000555178 MIR22HGQ0VDD5 57 aa4.72□□□□□ -1.65
TDP1-211ENST00000555178 KRTAP19-8Q3LI54 63 aa4.71□□□□□ -1.66
TDP1-211ENST00000555178 SSPOA2VEC9 5147 aa4.71□□□□□ -1.66
TDP1-211ENST00000555178 KRTAP12-2P59991 146 aa4.65□□□□□ -1.66
TDP1-211ENST00000555178 KRTAP12-1P59990 96 aa4.64□□□□□ -1.67
TDP1-211ENST00000555178 CDC42SE1Q9NRR8 79 aa4.64□□□□□ -1.67
TDP1-211ENST00000555178 SPINT4Q6UDR6 99 aa4.63□□□□□ -1.67
TDP1-211ENST00000555178 BRK1Q8WUW1 75 aa4.62□□□□□ -1.67
TDP1-211ENST00000555178 A6NN06 94 aa4.59□□□□□ -1.67
TDP1-211ENST00000555178 CRCT1Q9UGL9 99 aa4.58□□□□□ -1.68
TDP1-211ENST00000555178 PLAC4Q8WY50 150 aa4.57□□□□□ -1.68
TDP1-211ENST00000555178 FCGBPQ9Y6R7 5405 aaPredicted RBP4.55□□□□□ -1.68
TDP1-211ENST00000555178 KRTAP19-6Q3LI70 58 aa4.54□□□□□ -1.68
TDP1-211ENST00000555178 MT1XP80297 61 aa4.52□□□□□ -1.69
TDP1-211ENST00000555178 CAMK2N1Q7Z7J9 78 aa4.5□□□□□ -1.69
TDP1-211ENST00000555178 KRTAP10-5P60370 271 aa4.5□□□□□ -1.69
TDP1-211ENST00000555178 KRTAP9-6A0A140TA67 174 aa4.49□□□□□ -1.69
TDP1-211ENST00000555178 K7ERS5 55 aa4.47□□□□□ -1.69
TDP1-211ENST00000555178 C10orf95Q9H7T3 257 aa4.41□□□□□ -1.7
TDP1-211ENST00000555178 PRO0628Q9UI54 55 aa4.4□□□□□ -1.7
TDP1-211ENST00000555178 KMT2DO14686 5537 aa4.37□□□□□ -1.71
TDP1-211ENST00000555178 PRO2289Q9P1D8 64 aa4.37□□□□□ -1.71
TDP1-211ENST00000555178 KRTAP10-7P60409 375 aaPredicted RBP4.35□□□□□ -1.71
TDP1-211ENST00000555178 PMAIP1Q13794 54 aa4.34□□□□□ -1.72
TDP1-211ENST00000555178 MACF1Q9UPN3 7388 aaKnown RBP4.33□□□□□ -1.72
TDP1-211ENST00000555178 ROMO1P60602 79 aa4.31□□□□□ -1.72
TDP1-211ENST00000555178 H3BS24 57 aa4.3□□□□□ -1.72
TDP1-211ENST00000555178 KRTAP4-8A0A0G2JLE6 195 aa4.27□□□□□ -1.73
TDP1-211ENST00000555178 KRTAP4-8Q9BYQ9 185 aa4.27□□□□□ -1.73
TDP1-211ENST00000555178 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.26□□□□□ -1.73
TDP1-211ENST00000555178 SYNE2Q8WXH0 6885 aaKnown RBP4.26□□□□□ -1.73
TDP1-211ENST00000555178 KRTAP10-12P60413 245 aa4.25□□□□□ -1.73
TDP1-211ENST00000555178 TNP1P09430 55 aa4.24□□□□□ -1.73
TDP1-211ENST00000555178 KRTAP25-1Q3LHN0 102 aa4.19□□□□□ -1.74
TDP1-211ENST00000555178 LCE3AQ5TA76 89 aa4.16□□□□□ -1.74
TDP1-211ENST00000555178 PRAC1Q96KF2 57 aa4.16□□□□□ -1.74
TDP1-211ENST00000555178 KTN1-AS1Q86SY8 53 aa4.1□□□□□ -1.75
TDP1-211ENST00000555178 KRTAP8-1Q8IUC2 63 aa4.1□□□□□ -1.75
TDP1-211ENST00000555178 KRTAP9-7A8MTY7 169 aa4.09□□□□□ -1.75
TDP1-211ENST00000555178 MUC12Q9UKN1 5478 aa4.07□□□□□ -1.76
TDP1-211ENST00000555178 KRTAP6-3Q3LI67 103 aa4.05□□□□□ -1.76
TDP1-211ENST00000555178 A0A0A0MQY5 61 aa4.04□□□□□ -1.76
TDP1-211ENST00000555178 KRTAP19-7Q3SYF9 63 aa4.04□□□□□ -1.76
TDP1-211ENST00000555178 KRTAP5-9P26371 169 aa4.03□□□□□ -1.76
TDP1-211ENST00000555178 KRTAP19-5Q3LI72 72 aa4.03□□□□□ -1.76
TDP1-211ENST00000555178 SPRR2FQ96RM1 72 aa4.03□□□□□ -1.76
TDP1-211ENST00000555178 KRTAP23-1A1A580 65 aa4.01□□□□□ -1.77
TDP1-211ENST00000555178 MDN1Q9NU22 5596 aa3.99□□□□□ -1.77
TDP1-211ENST00000555178 PP632Q6XCG6 107 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms