RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 H7BZZ5 65 aa8.13□□□□□ -1.11
SPTLC2-203ENST00000554901 M0R2T5 61 aa8.1□□□□□ -1.11
SPTLC2-203ENST00000554901 KRTAP3-1Q9BYR8 98 aa8.1□□□□□ -1.11
SPTLC2-203ENST00000554901 A8MUN3 132 aa8.06□□□□□ -1.12
SPTLC2-203ENST00000554901 SNURFQ9Y675 71 aa8.06□□□□□ -1.12
SPTLC2-203ENST00000554901 SMIM26A0A096LP01 95 aa8.04□□□□□ -1.12
SPTLC2-203ENST00000554901 KRTAP10-6P60371 365 aaPredicted RBP7.98□□□□□ -1.13
SPTLC2-203ENST00000554901 S4R3F8 94 aa7.98□□□□□ -1.13
SPTLC2-203ENST00000554901 LORP23490 312 aaPredicted RBP7.96□□□□□ -1.14
SPTLC2-203ENST00000554901 DMAC1Q96GE9 116 aa7.96□□□□□ -1.14
SPTLC2-203ENST00000554901 SPANXA2-OT1Q8N9U9 137 aa7.94□□□□□ -1.14
SPTLC2-203ENST00000554901 LCA10Q71F78 164 aa7.92□□□□□ -1.14
SPTLC2-203ENST00000554901 CSAG1Q6PB30 78 aa7.88□□□□□ -1.15
SPTLC2-203ENST00000554901 ACYP2P14621 99 aa7.87□□□□□ -1.15
SPTLC2-203ENST00000554901 KRTAP9-8Q9BYQ0 159 aa7.84□□□□□ -1.15
SPTLC2-203ENST00000554901 PRO0628Q9UI54 55 aa7.83□□□□□ -1.16
SPTLC2-203ENST00000554901 MT2AP02795 61 aa7.78□□□□□ -1.16
SPTLC2-203ENST00000554901 LCE2BO14633 110 aa7.77□□□□□ -1.17
SPTLC2-203ENST00000554901 V9GYY9 64 aa7.75□□□□□ -1.17
SPTLC2-203ENST00000554901 Q1T7F1 81 aa7.73□□□□□ -1.17
SPTLC2-203ENST00000554901 SPTSSBQ8NFR3 76 aa7.71□□□□□ -1.18
SPTLC2-203ENST00000554901 CHKB-CPT1BH3BT56 60 aa7.7□□□□□ -1.18
SPTLC2-203ENST00000554901 MT1FP04733 61 aa7.7□□□□□ -1.18
SPTLC2-203ENST00000554901 KRTAP10-10P60014 251 aa7.7□□□□□ -1.18
SPTLC2-203ENST00000554901 H0YAA0 97 aa7.69□□□□□ -1.18
SPTLC2-203ENST00000554901 BRK1Q8WUW1 75 aa7.67□□□□□ -1.18
SPTLC2-203ENST00000554901 COA5Q86WW8 74 aa7.64□□□□□ -1.19
SPTLC2-203ENST00000554901 KRTAP9-3Q9BYQ3 159 aa7.58□□□□□ -1.2
SPTLC2-203ENST00000554901 KRTAP9-2Q9BYQ4 174 aa7.57□□□□□ -1.2
SPTLC2-203ENST00000554901 ADM2Q7Z4H4 148 aa7.54□□□□□ -1.2
SPTLC2-203ENST00000554901 CRIPTQ9P021 101 aa7.52□□□□□ -1.2
SPTLC2-203ENST00000554901 PSPHP1O15172 72 aa7.48□□□□□ -1.21
SPTLC2-203ENST00000554901 SPRR2GQ9BYE4 73 aa7.44□□□□□ -1.22
SPTLC2-203ENST00000554901 Q5VV11 94 aa7.43□□□□□ -1.22
SPTLC2-203ENST00000554901 P0C880 135 aa7.42□□□□□ -1.22
SPTLC2-203ENST00000554901 KRTAP19-1Q8IUB9 90 aa7.42□□□□□ -1.22
SPTLC2-203ENST00000554901 PRR15LQ9BU68 103 aa7.42□□□□□ -1.22
SPTLC2-203ENST00000554901 LINC01558Q9Y6Z2 57 aa7.39□□□□□ -1.23
SPTLC2-203ENST00000554901 SEC61GP60059 68 aa7.37□□□□□ -1.23
SPTLC2-203ENST00000554901 PMAIP1Q13794 54 aa7.35□□□□□ -1.23
SPTLC2-203ENST00000554901 R4GN34 69 aa7.35□□□□□ -1.23
SPTLC2-203ENST00000554901 A6NED7 52 aa7.32□□□□□ -1.24
SPTLC2-203ENST00000554901 KRTAP19-8Q3LI54 63 aa7.31□□□□□ -1.24
SPTLC2-203ENST00000554901 CDC42SE1Q9NRR8 79 aa7.3□□□□□ -1.24
SPTLC2-203ENST00000554901 USH2AO75445 5202 aa7.29□□□□□ -1.24
SPTLC2-203ENST00000554901 M0QZ58 72 aa7.28□□□□□ -1.24
SPTLC2-203ENST00000554901 FSIP2Q5CZC0 6907 aa7.26□□□□□ -1.25
SPTLC2-203ENST00000554901 A0A1B0GU69 56 aa7.26□□□□□ -1.25
SPTLC2-203ENST00000554901 CRCT1Q9UGL9 99 aa7.25□□□□□ -1.25
SPTLC2-203ENST00000554901 LOC100996750A0A140TA64 210 aa7.23□□□□□ -1.25
SPTLC2-203ENST00000554901 KRTAP4-6Q9BYQ5 205 aa7.23□□□□□ -1.25
SPTLC2-203ENST00000554901 MT1BP07438 61 aa7.21□□□□□ -1.26
SPTLC2-203ENST00000554901 KTN1-AS1Q86SY8 53 aa7.18□□□□□ -1.26
SPTLC2-203ENST00000554901 A0A1B0GU33 70 aa7.17□□□□□ -1.26
SPTLC2-203ENST00000554901 KRTAP9-6A0A140TA67 174 aa7.17□□□□□ -1.26
SPTLC2-203ENST00000554901 SSPOA2VEC9 5147 aa7.13□□□□□ -1.27
SPTLC2-203ENST00000554901 KRTAP19-6Q3LI70 58 aa7.13□□□□□ -1.27
SPTLC2-203ENST00000554901 LINC01554Q52M75 96 aa7.12□□□□□ -1.27
SPTLC2-203ENST00000554901 A6NN06 94 aa7.11□□□□□ -1.27
SPTLC2-203ENST00000554901 A8MU10 97 aa7.11□□□□□ -1.27
SPTLC2-203ENST00000554901 KRTAP13-4Q3LI77 160 aa7.11□□□□□ -1.27
SPTLC2-203ENST00000554901 PLAC4Q8WY50 150 aa7.09□□□□□ -1.27
SPTLC2-203ENST00000554901 SPATA8Q6RVD6 105 aa7.03□□□□□ -1.28
SPTLC2-203ENST00000554901 UQCR11O14957 56 aa7.01□□□□□ -1.29
SPTLC2-203ENST00000554901 KRTAP10-5P60370 271 aa6.97□□□□□ -1.29
SPTLC2-203ENST00000554901 MIR22HGQ0VDD5 57 aa6.96□□□□□ -1.3
SPTLC2-203ENST00000554901 A0A0D9SG42 100 aa6.94□□□□□ -1.3
SPTLC2-203ENST00000554901 PRO2289Q9P1D8 64 aa6.93□□□□□ -1.3
SPTLC2-203ENST00000554901 FCGBPQ9Y6R7 5405 aaPredicted RBP6.92□□□□□ -1.3
SPTLC2-203ENST00000554901 MT1XP80297 61 aa6.87□□□□□ -1.31
SPTLC2-203ENST00000554901 KRTAP12-1P59990 96 aa6.86□□□□□ -1.31
SPTLC2-203ENST00000554901 SPINT4Q6UDR6 99 aa6.83□□□□□ -1.32
SPTLC2-203ENST00000554901 CAMK2N1Q7Z7J9 78 aa6.82□□□□□ -1.32
SPTLC2-203ENST00000554901 KRTAP12-2P59991 146 aa6.79□□□□□ -1.32
SPTLC2-203ENST00000554901 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.71□□□□□ -1.33
SPTLC2-203ENST00000554901 PRAC1Q96KF2 57 aa6.67□□□□□ -1.34
SPTLC2-203ENST00000554901 K7ERS5 55 aa6.66□□□□□ -1.34
SPTLC2-203ENST00000554901 MACF1Q9UPN3 7388 aaKnown RBP6.63□□□□□ -1.35
SPTLC2-203ENST00000554901 KRTAP10-12P60413 245 aa6.55□□□□□ -1.36
SPTLC2-203ENST00000554901 KRTAP10-7P60409 375 aaPredicted RBP6.55□□□□□ -1.36
SPTLC2-203ENST00000554901 KRTAP4-8Q9BYQ9 185 aa6.54□□□□□ -1.36
SPTLC2-203ENST00000554901 KRTAP9-7A8MTY7 169 aa6.5□□□□□ -1.37
SPTLC2-203ENST00000554901 C10orf95Q9H7T3 257 aa6.5□□□□□ -1.37
SPTLC2-203ENST00000554901 KRTAP6-3Q3LI67 103 aa6.47□□□□□ -1.37
SPTLC2-203ENST00000554901 KRTAP25-1Q3LHN0 102 aa6.45□□□□□ -1.38
SPTLC2-203ENST00000554901 SYNE2Q8WXH0 6885 aaKnown RBP6.44□□□□□ -1.38
SPTLC2-203ENST00000554901 TNP1P09430 55 aa6.44□□□□□ -1.38
SPTLC2-203ENST00000554901 KRTAP4-8A0A0G2JLE6 195 aa6.4□□□□□ -1.39
SPTLC2-203ENST00000554901 KRTAP8-1Q8IUC2 63 aa6.4□□□□□ -1.39
SPTLC2-203ENST00000554901 KRTAP5-9P26371 169 aa6.38□□□□□ -1.39
SPTLC2-203ENST00000554901 ROMO1P60602 79 aa6.37□□□□□ -1.39
SPTLC2-203ENST00000554901 KMT2DO14686 5537 aa6.36□□□□□ -1.39
SPTLC2-203ENST00000554901 SPRR2FQ96RM1 72 aa6.25□□□□□ -1.41
SPTLC2-203ENST00000554901 LCE3AQ5TA76 89 aa6.2□□□□□ -1.42
SPTLC2-203ENST00000554901 LCE3BQ5TA77 95 aa6.2□□□□□ -1.42
SPTLC2-203ENST00000554901 KRTAP4-12Q9BQ66 201 aa6.16□□□□□ -1.42
SPTLC2-203ENST00000554901 KRTAP23-1A1A580 65 aa6.15□□□□□ -1.43
SPTLC2-203ENST00000554901 KRTAP19-7Q3SYF9 63 aa6.14□□□□□ -1.43
SPTLC2-203ENST00000554901 MUC12Q9UKN1 5478 aa6.11□□□□□ -1.43
SPTLC2-203ENST00000554901 KRTAP9-9Q9BYP9 154 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms