RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 THOC2Q8NI27 1593 aaKnown RBP-0.45□□□□□ -2.48
SCFD1-213ENST00000554776 MROH1Q8NDA8 1641 aa-0.45□□□□□ -2.48
SCFD1-213ENST00000554776 ABCA5Q8WWZ7 1642 aa-0.45□□□□□ -2.48
SCFD1-213ENST00000554776 CLIP1P30622 1438 aa-0.45□□□□□ -2.48
SCFD1-213ENST00000554776 GYPAP02724 150 aa-0.45□□□□□ -2.48
SCFD1-213ENST00000554776 HMGN2P05204 90 aaKnown RBP-0.45□□□□□ -2.48
SCFD1-213ENST00000554776 HTN3P15516 51 aa-0.45□□□□□ -2.48
SCFD1-213ENST00000554776 PEA15Q15121 130 aa-0.45□□□□□ -2.48
SCFD1-213ENST00000554776 C9orf62Q8N4C0 152 aa-0.45□□□□□ -2.48
SCFD1-213ENST00000554776 CDKN2A-AS1Q9UH64 79 aa-0.45□□□□□ -2.48
SCFD1-213ENST00000554776 MAP3K1Q13233 1512 aa-0.45□□□□□ -2.48
SCFD1-213ENST00000554776 UGGT2Q9NYU1 1516 aa-0.45□□□□□ -2.48
SCFD1-213ENST00000554776 ABCA8O94911 1581 aa-0.45□□□□□ -2.48
SCFD1-213ENST00000554776 PLIN4Q96Q06 1357 aa-0.45□□□□□ -2.48
SCFD1-213ENST00000554776 ABCA9Q8IUA7 1624 aa-0.46□□□□□ -2.48
SCFD1-213ENST00000554776 ADCY10Q96PN6 1610 aa-0.46□□□□□ -2.48
SCFD1-213ENST00000554776 RRBP1Q9P2E9 1410 aaKnown RBP-0.46□□□□□ -2.48
SCFD1-213ENST00000554776 LINC01546A6NGU7 62 aa-0.46□□□□□ -2.48
SCFD1-213ENST00000554776 H0YGG7 62 aa-0.46□□□□□ -2.48
SCFD1-213ENST00000554776 HMGA1P17096 107 aaKnown RBP-0.46□□□□□ -2.48
SCFD1-213ENST00000554776 COX7BP24311 80 aa-0.46□□□□□ -2.48
SCFD1-213ENST00000554776 DUOX1Q9NRD9 1551 aa-0.46□□□□□ -2.48
SCFD1-213ENST00000554776 DIP2BQ9P265 1576 aa-0.46□□□□□ -2.48
SCFD1-213ENST00000554776 CLTCL1P53675 1640 aa-0.46□□□□□ -2.48
SCFD1-213ENST00000554776 ATP7BP35670 1465 aa-0.47□□□□□ -2.48
SCFD1-213ENST00000554776 ABCC6O95255 1503 aa-0.47□□□□□ -2.48
SCFD1-213ENST00000554776 LMTK2Q8IWU2 1503 aa-0.47□□□□□ -2.48
SCFD1-213ENST00000554776 INO80Q9ULG1 1556 aaPredicted RBP-0.47□□□□□ -2.48
SCFD1-213ENST00000554776 DEFB131BA0A096LNP1 70 aa-0.47□□□□□ -2.48
SCFD1-213ENST00000554776 IQCF6A8MYZ5 107 aa-0.47□□□□□ -2.48
SCFD1-213ENST00000554776 APELAP0DMC3 54 aa-0.47□□□□□ -2.48
SCFD1-213ENST00000554776 HTN1P15515 57 aa-0.47□□□□□ -2.48
SCFD1-213ENST00000554776 NMSQ5H8A3 153 aa-0.47□□□□□ -2.48
SCFD1-213ENST00000554776 LINC01556Q5JQF7 62 aa-0.47□□□□□ -2.48
SCFD1-213ENST00000554776 LEAP2Q969E1 77 aa-0.47□□□□□ -2.48
SCFD1-213ENST00000554776 IGLV5-48A0A075B6I7 105 aa-0.48□□□□□ -2.49
SCFD1-213ENST00000554776 A0A096LNI7 61 aa-0.48□□□□□ -2.49
SCFD1-213ENST00000554776 A0A1B0GUT8 65 aa-0.48□□□□□ -2.49
SCFD1-213ENST00000554776 TNP1P09430 55 aa-0.48□□□□□ -2.49
SCFD1-213ENST00000554776 SPART-AS1P0CW21 52 aa-0.48□□□□□ -2.49
SCFD1-213ENST00000554776 CD52P31358 61 aa-0.48□□□□□ -2.49
SCFD1-213ENST00000554776 SMIM11AP58511 58 aa-0.48□□□□□ -2.49
SCFD1-213ENST00000554776 PLGLAQ15195 96 aa-0.48□□□□□ -2.49
SCFD1-213ENST00000554776 DEFB133Q30KQ1 61 aa-0.48□□□□□ -2.49
SCFD1-213ENST00000554776 SMIM5Q71RC9 77 aa-0.48□□□□□ -2.49
SCFD1-213ENST00000554776 CCNB3Q8WWL7 1395 aa-0.48□□□□□ -2.49
SCFD1-213ENST00000554776 CD163L1Q9NR16 1453 aa-0.48□□□□□ -2.49
SCFD1-213ENST00000554776 A0A096LPF7 62 aa-0.49□□□□□ -2.49
SCFD1-213ENST00000554776 TFF3Q07654 80 aa-0.49□□□□□ -2.49
SCFD1-213ENST00000554776 GAFA1Q96PS6 74 aa-0.49□□□□□ -2.49
SCFD1-213ENST00000554776 Q9H521 79 aa-0.49□□□□□ -2.49
SCFD1-213ENST00000554776 CEP162Q5TB80 1403 aa-0.49□□□□□ -2.49
SCFD1-213ENST00000554776 TTC37Q6PGP7 1564 aa-0.49□□□□□ -2.49
SCFD1-213ENST00000554776 DEFB130BP0DP73 79 aa-0.51□□□□□ -2.49
SCFD1-213ENST00000554776 DEFB130AP0DP74 79 aa-0.51□□□□□ -2.49
SCFD1-213ENST00000554776 ABCC1P33527 1531 aa-0.51□□□□□ -2.49
SCFD1-213ENST00000554776 WFDC10BQ8IUB3 73 aa-0.51□□□□□ -2.49
SCFD1-213ENST00000554776 MROH2BQ7Z745 1585 aa-0.52□□□□□ -2.49
SCFD1-213ENST00000554776 URB2Q14146 1524 aaKnown RBP-0.52□□□□□ -2.49
SCFD1-213ENST00000554776 MMP24-AS1A0A0U1RRL7 71 aa-0.52□□□□□ -2.49
SCFD1-213ENST00000554776 NDUFA3O95167 84 aa-0.52□□□□□ -2.49
SCFD1-213ENST00000554776 RPS27P42677 84 aaKnown RBP-0.52□□□□□ -2.49
SCFD1-213ENST00000554776 ABCC8Q09428 1581 aa-0.53□□□□□ -2.49
SCFD1-213ENST00000554776 CYB5AP00167 134 aa-0.53□□□□□ -2.49
SCFD1-213ENST00000554776 RPL38P63173 70 aaKnown RBP-0.53□□□□□ -2.49
SCFD1-213ENST00000554776 DEFB106AQ8N104 65 aa-0.53□□□□□ -2.49
SCFD1-213ENST00000554776 IQGAP2Q13576 1575 aa-0.53□□□□□ -2.49
SCFD1-213ENST00000554776 CFAP74Q9C0B2 1584 aa-0.53□□□□□ -2.49
SCFD1-213ENST00000554776 CPS1P31327 1500 aa-0.54□□□□□ -2.5
SCFD1-213ENST00000554776 ATP7AQ04656 1500 aa-0.54□□□□□ -2.5
SCFD1-213ENST00000554776 TRAV21A0A0B4J279 112 aa-0.54□□□□□ -2.5
SCFD1-213ENST00000554776 MYMXA0A1B0GTQ4 84 aa-0.54□□□□□ -2.5
SCFD1-213ENST00000554776 DEFB108AA8MXU0 73 aa-0.54□□□□□ -2.5
SCFD1-213ENST00000554776 H3BUX3 64 aa-0.54□□□□□ -2.5
SCFD1-213ENST00000554776 TOP2AP11388 1531 aaKnown RBP-0.54□□□□□ -2.5
SCFD1-213ENST00000554776 ABCA10Q8WWZ4 1543 aa-0.54□□□□□ -2.5
SCFD1-213ENST00000554776 DEFB108BQ8NET1 73 aa-0.55□□□□□ -2.5
SCFD1-213ENST00000554776 S100A16Q96FQ6 103 aaKnown RBP-0.55□□□□□ -2.5
SCFD1-213ENST00000554776 V9GYS6 101 aa-0.55□□□□□ -2.5
SCFD1-213ENST00000554776 SAMD9LQ8IVG5 1584 aa-0.55□□□□□ -2.5
SCFD1-213ENST00000554776 CCDC18Q5T9S5 1454 aa-0.55□□□□□ -2.5
SCFD1-213ENST00000554776 WT1-ASQ06250 92 aa-0.56□□□□□ -2.5
SCFD1-213ENST00000554776 TDRG1Q3Y452 100 aa-0.56□□□□□ -2.5
SCFD1-213ENST00000554776 PYY3Q5JQD4 70 aa-0.56□□□□□ -2.5
SCFD1-213ENST00000554776 RABAC1Q9UI14 185 aa-0.56□□□□□ -2.5
SCFD1-213ENST00000554776 SYCP2Q9BX26 1530 aa-0.56□□□□□ -2.5
SCFD1-213ENST00000554776 UACAQ9BZF9 1416 aa-0.56□□□□□ -2.5
SCFD1-213ENST00000554776 IQGAP3Q86VI3 1631 aa-0.56□□□□□ -2.5
SCFD1-213ENST00000554776 EFCAB5A4FU69 1503 aa-0.57□□□□□ -2.5
SCFD1-213ENST00000554776 RHPN1-AS1Q9BWJ2 59 aa-0.57□□□□□ -2.5
SCFD1-213ENST00000554776 CCDC88BA6NC98 1476 aa-0.58□□□□□ -2.5
SCFD1-213ENST00000554776 M0QY20 66 aa-0.58□□□□□ -2.5
SCFD1-213ENST00000554776 SFTA3P0C7M3 94 aa-0.58□□□□□ -2.5
SCFD1-213ENST00000554776 POLR2KP53803 58 aaKnown RBP-0.58□□□□□ -2.5
SCFD1-213ENST00000554776 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.58□□□□□ -2.5
SCFD1-213ENST00000554776 FANCD2Q9BXW9 1451 aa-0.59□□□□□ -2.5
SCFD1-213ENST00000554776 ACYP1P07311 99 aa-0.59□□□□□ -2.5
SCFD1-213ENST00000554776 SNRPFP62306 86 aaKnown RBP-0.59□□□□□ -2.5
SCFD1-213ENST00000554776 DEFB114Q30KQ6 69 aa-0.59□□□□□ -2.5
SCFD1-213ENST00000554776 ENHOQ6UWT2 76 aa-0.59□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms