RNA–Protein interactions for RNA: ENST00000553428.2

PCNX1-204, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-204ENST00000553428 IMUPQ9GZP8 106 aa3.79□□□□□ -1.8
PCNX1-204ENST00000553428 NDUFC1O43677 76 aa3.78□□□□□ -1.8
PCNX1-204ENST00000553428 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.77□□□□□ -1.81
PCNX1-204ENST00000553428 K7ERU9 68 aa3.77□□□□□ -1.81
PCNX1-204ENST00000553428 KLKP1Q107X0 134 aa3.77□□□□□ -1.81
PCNX1-204ENST00000553428 H0YAA0 97 aa3.76□□□□□ -1.81
PCNX1-204ENST00000553428 CRIPTQ9P021 101 aa3.76□□□□□ -1.81
PCNX1-204ENST00000553428 SPRR2GQ9BYE4 73 aa3.75□□□□□ -1.81
PCNX1-204ENST00000553428 KRTAP19-8Q3LI54 63 aa3.73□□□□□ -1.81
PCNX1-204ENST00000553428 SMIM20Q8N5G0 67 aa3.73□□□□□ -1.81
PCNX1-204ENST00000553428 MT-ATP8P03928 68 aa3.72□□□□□ -1.81
PCNX1-204ENST00000553428 Q5VV11 94 aa3.72□□□□□ -1.81
PCNX1-204ENST00000553428 USH2AO75445 5202 aa3.72□□□□□ -1.81
PCNX1-204ENST00000553428 KRTAP9-7A8MTY7 169 aa3.71□□□□□ -1.82
PCNX1-204ENST00000553428 DMAC1Q96GE9 116 aa3.71□□□□□ -1.82
PCNX1-204ENST00000553428 TRAV7A0A075B6U4 112 aa3.69□□□□□ -1.82
PCNX1-204ENST00000553428 MT1BP07438 61 aa3.69□□□□□ -1.82
PCNX1-204ENST00000553428 SSPOA2VEC9 5147 aa3.68□□□□□ -1.82
PCNX1-204ENST00000553428 ADM2Q7Z4H4 148 aa3.66□□□□□ -1.82
PCNX1-204ENST00000553428 C20orf197Q8N268 126 aa3.65□□□□□ -1.83
PCNX1-204ENST00000553428 A6NN06 94 aa3.64□□□□□ -1.83
PCNX1-204ENST00000553428 ACYP2P14621 99 aa3.64□□□□□ -1.83
PCNX1-204ENST00000553428 KRTAP3-2Q9BYR7 98 aa3.64□□□□□ -1.83
PCNX1-204ENST00000553428 FCGBPQ9Y6R7 5405 aaPredicted RBP3.62□□□□□ -1.83
PCNX1-204ENST00000553428 KRTAP10-5P60370 271 aa3.61□□□□□ -1.83
PCNX1-204ENST00000553428 SPTSSBQ8NFR3 76 aa3.61□□□□□ -1.83
PCNX1-204ENST00000553428 SERP2Q8N6R1 65 aa3.6□□□□□ -1.83
PCNX1-204ENST00000553428 R4GN34 69 aa3.59□□□□□ -1.83
PCNX1-204ENST00000553428 KRTAP6-3Q3LI67 103 aa3.58□□□□□ -1.84
PCNX1-204ENST00000553428 SPANXA2-OT1Q8N9U9 137 aa3.58□□□□□ -1.84
PCNX1-204ENST00000553428 P0C880 135 aa3.57□□□□□ -1.84
PCNX1-204ENST00000553428 SNURFQ9Y675 71 aa3.57□□□□□ -1.84
PCNX1-204ENST00000553428 CHKB-CPT1BH3BT56 60 aa3.56□□□□□ -1.84
PCNX1-204ENST00000553428 M0QZ58 72 aa3.55□□□□□ -1.84
PCNX1-204ENST00000553428 PLAC4Q8WY50 150 aa3.54□□□□□ -1.84
PCNX1-204ENST00000553428 PRO2289Q9P1D8 64 aa3.54□□□□□ -1.84
PCNX1-204ENST00000553428 COX7CP15954 63 aa3.49□□□□□ -1.85
PCNX1-204ENST00000553428 MT1XP80297 61 aa3.47□□□□□ -1.85
PCNX1-204ENST00000553428 LINC01554Q52M75 96 aa3.47□□□□□ -1.85
PCNX1-204ENST00000553428 MACF1Q9UPN3 7388 aaKnown RBP3.46□□□□□ -1.86
PCNX1-204ENST00000553428 COA5Q86WW8 74 aa3.45□□□□□ -1.86
PCNX1-204ENST00000553428 KRTAP5-9P26371 169 aa3.44□□□□□ -1.86
PCNX1-204ENST00000553428 H7BZZ5 65 aa3.42□□□□□ -1.86
PCNX1-204ENST00000553428 KRTAP12-2P59991 146 aa3.42□□□□□ -1.86
PCNX1-204ENST00000553428 SEC61GP60059 68 aa3.4□□□□□ -1.87
PCNX1-204ENST00000553428 SYNE2Q8WXH0 6885 aaKnown RBP3.39□□□□□ -1.87
PCNX1-204ENST00000553428 ANAPC13Q9BS18 74 aa3.39□□□□□ -1.87
PCNX1-204ENST00000553428 SERP1Q9Y6X1 66 aa3.39□□□□□ -1.87
PCNX1-204ENST00000553428 CYSTM1Q9H1C7 97 aa3.37□□□□□ -1.87
PCNX1-204ENST00000553428 KRTAP13-4Q3LI77 160 aa3.35□□□□□ -1.87
PCNX1-204ENST00000553428 KRTAP8-1Q8IUC2 63 aa3.35□□□□□ -1.87
PCNX1-204ENST00000553428 SVIPQ8NHG7 77 aa3.35□□□□□ -1.87
PCNX1-204ENST00000553428 KRTAP10-12P60413 245 aa3.32□□□□□ -1.88
PCNX1-204ENST00000553428 SPRR2FQ96RM1 72 aa3.32□□□□□ -1.88
PCNX1-204ENST00000553428 A0A1B0GU33 70 aa3.31□□□□□ -1.88
PCNX1-204ENST00000553428 ATP5EP56381 51 aaPredicted RBP3.31□□□□□ -1.88
PCNX1-204ENST00000553428 CAMK2N1Q7Z7J9 78 aa3.31□□□□□ -1.88
PCNX1-204ENST00000553428 KRTAP10-7P60409 375 aaPredicted RBP3.3□□□□□ -1.88
PCNX1-204ENST00000553428 CCDC179H3BU77 68 aa3.29□□□□□ -1.88
PCNX1-204ENST00000553428 KRTAP4-8A0A0G2JLE6 195 aa3.28□□□□□ -1.88
PCNX1-204ENST00000553428 A0A1B0GU69 56 aa3.28□□□□□ -1.88
PCNX1-204ENST00000553428 KRTAP4-8Q9BYQ9 185 aa3.28□□□□□ -1.88
PCNX1-204ENST00000553428 KRTAP20-1Q3LI63 56 aa3.27□□□□□ -1.89
PCNX1-204ENST00000553428 A0A0D9SG42 100 aa3.26□□□□□ -1.89
PCNX1-204ENST00000553428 SPRR2EP22531 72 aa3.26□□□□□ -1.89
PCNX1-204ENST00000553428 SPRR2BP35325 72 aa3.26□□□□□ -1.89
PCNX1-204ENST00000553428 SPRR2AP35326 72 aa3.26□□□□□ -1.89
PCNX1-204ENST00000553428 SPATA8Q6RVD6 105 aa3.26□□□□□ -1.89
PCNX1-204ENST00000553428 LOC100996750A0A140TA64 210 aa3.25□□□□□ -1.89
PCNX1-204ENST00000553428 KRTAP4-6Q9BYQ5 205 aa3.25□□□□□ -1.89
PCNX1-204ENST00000553428 SMIM26A0A096LP01 95 aa3.24□□□□□ -1.89
PCNX1-204ENST00000553428 LCE1AQ5T7P2 110 aa3.23□□□□□ -1.89
PCNX1-204ENST00000553428 PRR15LQ9BU68 103 aa3.23□□□□□ -1.89
PCNX1-204ENST00000553428 KRTAP12-1P59990 96 aa3.22□□□□□ -1.89
PCNX1-204ENST00000553428 TMEM258P61165 79 aa3.22□□□□□ -1.89
PCNX1-204ENST00000553428 SPINT4Q6UDR6 99 aa3.22□□□□□ -1.89
PCNX1-204ENST00000553428 NEBP20929 6669 aa3.21□□□□□ -1.89
PCNX1-204ENST00000553428 KRTAP2-3P0C7H8 128 aa3.21□□□□□ -1.9
PCNX1-204ENST00000553428 KRTAP2-4Q9BYR9 128 aa3.21□□□□□ -1.9
PCNX1-204ENST00000553428 KMT2DO14686 5537 aa3.2□□□□□ -1.9
PCNX1-204ENST00000553428 LINC01558Q9Y6Z2 57 aa3.19□□□□□ -1.9
PCNX1-204ENST00000553428 H3BS24 57 aa3.16□□□□□ -1.9
PCNX1-204ENST00000553428 SPRR2DP22532 72 aa3.16□□□□□ -1.9
PCNX1-204ENST00000553428 A8MU10 97 aa3.14□□□□□ -1.91
PCNX1-204ENST00000553428 MUC12Q9UKN1 5478 aa3.13□□□□□ -1.91
PCNX1-204ENST00000553428 UQCR11O14957 56 aa3.11□□□□□ -1.91
PCNX1-204ENST00000553428 KRTAP2-2Q9BYT5 123 aa3.11□□□□□ -1.91
PCNX1-204ENST00000553428 KRTAP2-1Q9BYU5 128 aa3.11□□□□□ -1.91
PCNX1-204ENST00000553428 KRTAP19-7Q3SYF9 63 aa3.1□□□□□ -1.91
PCNX1-204ENST00000553428 MT1EP04732 61 aa3.08□□□□□ -1.92
PCNX1-204ENST00000553428 TNP1P09430 55 aa3.08□□□□□ -1.92
PCNX1-204ENST00000553428 V9GYY9 64 aa3.07□□□□□ -1.92
PCNX1-204ENST00000553428 LCE3BQ5TA77 95 aa3.06□□□□□ -1.92
PCNX1-204ENST00000553428 KRTAP19-3Q7Z4W3 81 aa3.06□□□□□ -1.92
PCNX1-204ENST00000553428 C10orf95Q9H7T3 257 aa3.06□□□□□ -1.92
PCNX1-204ENST00000553428 LCE5AQ5TCM9 118 aa3.05□□□□□ -1.92
PCNX1-204ENST00000553428 MDN1Q9NU22 5596 aa3.04□□□□□ -1.92
PCNX1-204ENST00000553428 KRTAP19-5Q3LI72 72 aa3.04□□□□□ -1.92
PCNX1-204ENST00000553428 MIR22HGQ0VDD5 57 aa3.03□□□□□ -1.92
PCNX1-204ENST00000553428 Q1T7F1 81 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 401.5 ms