RNA–Protein interactions for RNA: ENST00000553409.5

NRDE2-202, Transcript of NRDE-2, necessary for RNA interference, domain containing, humanhuman

TSL 1 (best)

Gene NRDE2, Length 3,434 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRDE2-202ENST00000553409 FAT1Q14517 4588 aa5.89□□□□□ -1.47
NRDE2-202ENST00000553409 C10orf95Q9H7T3 257 aa5.89□□□□□ -1.47
NRDE2-202ENST00000553409 PKHD1L1Q86WI1 4243 aa5.88□□□□□ -1.47
NRDE2-202ENST00000553409 SMR3BP02814 79 aaPredicted RBP5.88□□□□□ -1.47
NRDE2-202ENST00000553409 KRTAP3-3Q9BYR6 98 aa5.87□□□□□ -1.47
NRDE2-202ENST00000553409 KRTAP3-2Q9BYR7 98 aa5.85□□□□□ -1.47
NRDE2-202ENST00000553409 DYNC1H1Q14204 4646 aaKnown RBP5.82□□□□□ -1.48
NRDE2-202ENST00000553409 APOBP04114 4563 aaKnown RBP5.8□□□□□ -1.48
NRDE2-202ENST00000553409 NDUFAF8A1L188 74 aa5.8□□□□□ -1.48
NRDE2-202ENST00000553409 KRTAP15-1Q3LI76 137 aa5.79□□□□□ -1.48
NRDE2-202ENST00000553409 J3QL48 77 aa5.79□□□□□ -1.48
NRDE2-202ENST00000553409 S4R3F8 94 aa5.77□□□□□ -1.49
NRDE2-202ENST00000553409 KRTAP12-2P59991 146 aa5.76□□□□□ -1.49
NRDE2-202ENST00000553409 KRTAP10-8P60410 259 aa5.75□□□□□ -1.49
NRDE2-202ENST00000553409 KRTAP10-4P60372 401 aaPredicted RBP5.74□□□□□ -1.49
NRDE2-202ENST00000553409 HSPG2P98160 4391 aa5.73□□□□□ -1.49
NRDE2-202ENST00000553409 FAT3Q8TDW7 4589 aa5.72□□□□□ -1.49
NRDE2-202ENST00000553409 MYCBP2O75592 4640 aa5.7□□□□□ -1.5
NRDE2-202ENST00000553409 LRP1Q07954 4544 aaKnown RBP5.69□□□□□ -1.5
NRDE2-202ENST00000553409 KRTAP12-1P59990 96 aa5.68□□□□□ -1.5
NRDE2-202ENST00000553409 XP32Q5T750 250 aa5.63□□□□□ -1.51
NRDE2-202ENST00000553409 TNXBP22105 4242 aa5.6□□□□□ -1.51
NRDE2-202ENST00000553409 SEC61BP60468 96 aaKnown RBP5.58□□□□□ -1.52
NRDE2-202ENST00000553409 A0A1B0GVY2 172 aa5.56□□□□□ -1.52
NRDE2-202ENST00000553409 LPAP08519 4548 aa5.54□□□□□ -1.52
NRDE2-202ENST00000553409 M0QZ58 72 aa5.52□□□□□ -1.53
NRDE2-202ENST00000553409 LUZP6Q538Z0 58 aa5.51□□□□□ -1.53
NRDE2-202ENST00000553409 KMT2CQ8NEZ4 4911 aaKnown RBP5.46□□□□□ -1.54
NRDE2-202ENST00000553409 RYR2Q92736 4967 aa5.44□□□□□ -1.54
NRDE2-202ENST00000553409 LRP2P98164 4655 aa5.42□□□□□ -1.54
NRDE2-202ENST00000553409 PLAC4Q8WY50 150 aa5.4□□□□□ -1.55
NRDE2-202ENST00000553409 Q5VSD8 79 aa5.37□□□□□ -1.55
NRDE2-202ENST00000553409 R4GN34 69 aa5.36□□□□□ -1.55
NRDE2-202ENST00000553409 LORP23490 312 aaPredicted RBP5.29□□□□□ -1.56
NRDE2-202ENST00000553409 MT1HL1P0DM35 61 aa5.29□□□□□ -1.56
NRDE2-202ENST00000553409 KRTAP17-1Q9BYP8 105 aa5.28□□□□□ -1.56
NRDE2-202ENST00000553409 RYR1P21817 5038 aa5.25□□□□□ -1.57
NRDE2-202ENST00000553409 RYR3Q15413 4870 aa5.21□□□□□ -1.57
NRDE2-202ENST00000553409 KIAA1109Q2LD37 5005 aa5.19□□□□□ -1.58
NRDE2-202ENST00000553409 PP632Q6XCG6 107 aa5.16□□□□□ -1.58
NRDE2-202ENST00000553409 CAMK2N1Q7Z7J9 78 aa5.13□□□□□ -1.59
NRDE2-202ENST00000553409 ABCA13Q86UQ4 5058 aa5.13□□□□□ -1.59
NRDE2-202ENST00000553409 MUC17Q685J3 4493 aa5.12□□□□□ -1.59
NRDE2-202ENST00000553409 KRTAP4-1Q9BYQ7 146 aa5.05□□□□□ -1.6
NRDE2-202ENST00000553409 EPPK1P58107 5090 aaKnown RBP5.03□□□□□ -1.6
NRDE2-202ENST00000553409 KRTAP19-2Q3LHN2 52 aa4.97□□□□□ -1.61
NRDE2-202ENST00000553409 KRTAP4-5Q9BYR2 181 aa4.96□□□□□ -1.62
NRDE2-202ENST00000553409 TNP1P09430 55 aa4.96□□□□□ -1.62
NRDE2-202ENST00000553409 SPRR5A0A1B0GTR4 108 aa4.95□□□□□ -1.62
NRDE2-202ENST00000553409 MUC2Q02817 5179 aa4.9□□□□□ -1.62
NRDE2-202ENST00000553409 KRTAP23-1A1A580 65 aa4.89□□□□□ -1.63
NRDE2-202ENST00000553409 FLGP20930 4061 aaPredicted RBP4.85□□□□□ -1.63
NRDE2-202ENST00000553409 HERC1Q15751 4861 aa4.78□□□□□ -1.64
NRDE2-202ENST00000553409 PCLOQ9Y6V0 5065 aa4.77□□□□□ -1.65
NRDE2-202ENST00000553409 HERC2O95714 4834 aa4.77□□□□□ -1.65
NRDE2-202ENST00000553409 BIRC6Q9NR09 4857 aa4.74□□□□□ -1.65
NRDE2-202ENST00000553409 LCE3AQ5TA76 89 aa4.69□□□□□ -1.66
NRDE2-202ENST00000553409 PRO2289Q9P1D8 64 aa4.68□□□□□ -1.66
NRDE2-202ENST00000553409 FAT4Q6V0I7 4981 aa4.66□□□□□ -1.66
NRDE2-202ENST00000553409 KRTAP19-1Q8IUB9 90 aa4.64□□□□□ -1.67
NRDE2-202ENST00000553409 SPRR2GQ9BYE4 73 aa4.64□□□□□ -1.67
NRDE2-202ENST00000553409 INE1O15225 51 aa4.56□□□□□ -1.68
NRDE2-202ENST00000553409 LCE2CQ5TA81 110 aa4.55□□□□□ -1.68
NRDE2-202ENST00000553409 KRTAP8-1Q8IUC2 63 aa4.54□□□□□ -1.68
NRDE2-202ENST00000553409 HMCN2Q8NDA2 5059 aa4.51□□□□□ -1.69
NRDE2-202ENST00000553409 M0R2T5 61 aa4.47□□□□□ -1.69
NRDE2-202ENST00000553409 UBR4Q5T4S7 5183 aa4.45□□□□□ -1.7
NRDE2-202ENST00000553409 KRTAP12-3P60328 96 aa4.44□□□□□ -1.7
NRDE2-202ENST00000553409 MT1FP04733 61 aa4.44□□□□□ -1.7
NRDE2-202ENST00000553409 KRTAP10-10P60014 251 aa4.43□□□□□ -1.7
NRDE2-202ENST00000553409 KRTAP10-12P60413 245 aa4.41□□□□□ -1.7
NRDE2-202ENST00000553409 MT2AP02795 61 aa4.41□□□□□ -1.7
NRDE2-202ENST00000553409 KRTAP10-5P60370 271 aa4.4□□□□□ -1.7
NRDE2-202ENST00000553409 MT1HP80294 61 aa4.39□□□□□ -1.71
NRDE2-202ENST00000553409 MT1XP80297 61 aa4.39□□□□□ -1.71
NRDE2-202ENST00000553409 RNF213Q63HN8 5207 aa4.37□□□□□ -1.71
NRDE2-202ENST00000553409 KRTAP19-8Q3LI54 63 aa4.37□□□□□ -1.71
NRDE2-202ENST00000553409 MT1BP07438 61 aa4.35□□□□□ -1.71
NRDE2-202ENST00000553409 KRTAP9-8Q9BYQ0 159 aa4.35□□□□□ -1.71
NRDE2-202ENST00000553409 KRTAP10-7P60409 375 aaPredicted RBP4.32□□□□□ -1.72
NRDE2-202ENST00000553409 LCE3CQ5T5A8 94 aa4.19□□□□□ -1.74
NRDE2-202ENST00000553409 KRTAP19-5Q3LI72 72 aa4.17□□□□□ -1.74
NRDE2-202ENST00000553409 KRTAP9-3Q9BYQ3 159 aa4.14□□□□□ -1.75
NRDE2-202ENST00000553409 KMT2DO14686 5537 aa4.14□□□□□ -1.75
NRDE2-202ENST00000553409 KRTAP9-6A8MVA2 160 aa4.12□□□□□ -1.75
NRDE2-202ENST00000553409 LCE2DQ5TA82 110 aaPredicted RBP4.12□□□□□ -1.75
NRDE2-202ENST00000553409 USH2AO75445 5202 aa4.04□□□□□ -1.76
NRDE2-202ENST00000553409 KRTAP2-3P0C7H8 128 aa4.02□□□□□ -1.77
NRDE2-202ENST00000553409 KRTAP2-4Q9BYR9 128 aa4.02□□□□□ -1.77
NRDE2-202ENST00000553409 KRTAP2-1Q9BYU5 128 aa4.02□□□□□ -1.77
NRDE2-202ENST00000553409 KRTAP4-8A0A0G2JLE6 195 aa4.02□□□□□ -1.77
NRDE2-202ENST00000553409 KRTAP4-8Q9BYQ9 185 aa4.02□□□□□ -1.77
NRDE2-202ENST00000553409 KRTAP4-7Q9BYR0 210 aa3.99□□□□□ -1.77
NRDE2-202ENST00000553409 FSIP2Q5CZC0 6907 aa3.99□□□□□ -1.77
NRDE2-202ENST00000553409 LCE2BO14633 110 aa3.96□□□□□ -1.78
NRDE2-202ENST00000553409 KRTAP19-7Q3SYF9 63 aa3.91□□□□□ -1.78
NRDE2-202ENST00000553409 LCE2AQ5TA79 106 aaPredicted RBP3.83□□□□□ -1.8
NRDE2-202ENST00000553409 MT1LQ93083 61 aa3.81□□□□□ -1.8
NRDE2-202ENST00000553409 MT1EP04732 61 aa3.76□□□□□ -1.81
NRDE2-202ENST00000553409 KRTAP19-4Q3LI73 84 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms