RNA–Protein interactions for RNA: ENST00000553078.5

CNOT2-243, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-243ENST00000553078 RYR3Q15413 4870 aa5.25□□□□□ -1.57
CNOT2-243ENST00000553078 TNXBP22105 4242 aa5.23□□□□□ -1.57
CNOT2-243ENST00000553078 DMBT1Q9UGM3 2413 aaPredicted RBP5.23□□□□□ -1.57
CNOT2-243ENST00000553078 K7ERS5 55 aa5.22□□□□□ -1.57
CNOT2-243ENST00000553078 KTN1-AS1Q86SY8 53 aa5.22□□□□□ -1.57
CNOT2-243ENST00000553078 FAT3Q8TDW7 4589 aa5.2□□□□□ -1.58
CNOT2-243ENST00000553078 A6NN06 94 aa5.2□□□□□ -1.58
CNOT2-243ENST00000553078 KRTAP4-5Q9BYR2 181 aa5.19□□□□□ -1.58
CNOT2-243ENST00000553078 LRP1Q07954 4544 aaKnown RBP5.17□□□□□ -1.58
CNOT2-243ENST00000553078 KIAA1109Q2LD37 5005 aa5.16□□□□□ -1.58
CNOT2-243ENST00000553078 CSAG1Q6PB30 78 aa5.15□□□□□ -1.59
CNOT2-243ENST00000553078 H0YAA0 97 aa5.12□□□□□ -1.59
CNOT2-243ENST00000553078 KRTAP3-3Q9BYR6 98 aa5.1□□□□□ -1.59
CNOT2-243ENST00000553078 EPPK1P58107 5090 aaKnown RBP5.06□□□□□ -1.6
CNOT2-243ENST00000553078 MYCBP2O75592 4640 aa5.05□□□□□ -1.6
CNOT2-243ENST00000553078 ADM2Q7Z4H4 148 aa5.05□□□□□ -1.6
CNOT2-243ENST00000553078 KRTAP10-6P60371 365 aaPredicted RBP5.02□□□□□ -1.61
CNOT2-243ENST00000553078 M0QZ58 72 aa5□□□□□ -1.61
CNOT2-243ENST00000553078 KRTAP3-2Q9BYR7 98 aa4.99□□□□□ -1.61
CNOT2-243ENST00000553078 A0A0D9SG42 100 aa4.98□□□□□ -1.61
CNOT2-243ENST00000553078 P0C880 135 aa4.98□□□□□ -1.61
CNOT2-243ENST00000553078 BIRC6Q9NR09 4857 aa4.95□□□□□ -1.62
CNOT2-243ENST00000553078 R4GN34 69 aa4.93□□□□□ -1.62
CNOT2-243ENST00000553078 PRAC1Q96KF2 57 aa4.91□□□□□ -1.62
CNOT2-243ENST00000553078 KRTAP13-4Q3LI77 160 aa4.9□□□□□ -1.63
CNOT2-243ENST00000553078 HERC2O95714 4834 aa4.9□□□□□ -1.63
CNOT2-243ENST00000553078 ROMO1P60602 79 aa4.89□□□□□ -1.63
CNOT2-243ENST00000553078 SPINT4Q6UDR6 99 aa4.89□□□□□ -1.63
CNOT2-243ENST00000553078 KRTAP4-1Q9BYQ7 146 aa4.88□□□□□ -1.63
CNOT2-243ENST00000553078 ABCA13Q86UQ4 5058 aa4.87□□□□□ -1.63
CNOT2-243ENST00000553078 LRP2P98164 4655 aa4.83□□□□□ -1.64
CNOT2-243ENST00000553078 LINC01554Q52M75 96 aa4.82□□□□□ -1.64
CNOT2-243ENST00000553078 KRTAP25-1Q3LHN0 102 aa4.8□□□□□ -1.64
CNOT2-243ENST00000553078 LPAP08519 4548 aa4.8□□□□□ -1.64
CNOT2-243ENST00000553078 KRTAP12-1P59990 96 aa4.79□□□□□ -1.64
CNOT2-243ENST00000553078 CRIPTQ9P021 101 aa4.79□□□□□ -1.64
CNOT2-243ENST00000553078 KRTAP12-2P59991 146 aa4.78□□□□□ -1.64
CNOT2-243ENST00000553078 PCLOQ9Y6V0 5065 aa4.77□□□□□ -1.65
CNOT2-243ENST00000553078 MUC17Q685J3 4493 aa4.77□□□□□ -1.65
CNOT2-243ENST00000553078 KRTAP19-2Q3LHN2 52 aa4.75□□□□□ -1.65
CNOT2-243ENST00000553078 UBR4Q5T4S7 5183 aa4.73□□□□□ -1.65
CNOT2-243ENST00000553078 M0R2T5 61 aa4.72□□□□□ -1.65
CNOT2-243ENST00000553078 CAMK2N1Q7Z7J9 78 aa4.68□□□□□ -1.66
CNOT2-243ENST00000553078 LORP23490 312 aaPredicted RBP4.64□□□□□ -1.67
CNOT2-243ENST00000553078 HERC1Q15751 4861 aa4.61□□□□□ -1.67
CNOT2-243ENST00000553078 HMCN2Q8NDA2 5059 aa4.57□□□□□ -1.68
CNOT2-243ENST00000553078 LCE2CQ5TA81 110 aa4.57□□□□□ -1.68
CNOT2-243ENST00000553078 MT1HP80294 61 aa4.56□□□□□ -1.68
CNOT2-243ENST00000553078 PLAC4Q8WY50 150 aa4.56□□□□□ -1.68
CNOT2-243ENST00000553078 C10orf95Q9H7T3 257 aa4.55□□□□□ -1.68
CNOT2-243ENST00000553078 FLGP20930 4061 aaPredicted RBP4.54□□□□□ -1.68
CNOT2-243ENST00000553078 KRTAP10-10P60014 251 aa4.51□□□□□ -1.69
CNOT2-243ENST00000553078 PP632Q6XCG6 107 aa4.51□□□□□ -1.69
CNOT2-243ENST00000553078 SPRR2GQ9BYE4 73 aa4.49□□□□□ -1.69
CNOT2-243ENST00000553078 TNP1P09430 55 aa4.47□□□□□ -1.69
CNOT2-243ENST00000553078 MT2AP02795 61 aa4.43□□□□□ -1.7
CNOT2-243ENST00000553078 MT1FP04733 61 aa4.4□□□□□ -1.71
CNOT2-243ENST00000553078 KRTAP19-1Q8IUB9 90 aa4.39□□□□□ -1.71
CNOT2-243ENST00000553078 KRTAP23-1A1A580 65 aa4.37□□□□□ -1.71
CNOT2-243ENST00000553078 KRTAP9-8Q9BYQ0 159 aa4.37□□□□□ -1.71
CNOT2-243ENST00000553078 KRTAP9-6A0A140TA67 174 aa4.35□□□□□ -1.71
CNOT2-243ENST00000553078 RNF213Q63HN8 5207 aa4.35□□□□□ -1.71
CNOT2-243ENST00000553078 MUC2Q02817 5179 aa4.35□□□□□ -1.71
CNOT2-243ENST00000553078 KRTAP19-8Q3LI54 63 aa4.33□□□□□ -1.72
CNOT2-243ENST00000553078 PRO2289Q9P1D8 64 aa4.28□□□□□ -1.72
CNOT2-243ENST00000553078 KRTAP15-1Q3LI76 137 aa4.23□□□□□ -1.73
CNOT2-243ENST00000553078 FAT4Q6V0I7 4981 aa4.22□□□□□ -1.73
CNOT2-243ENST00000553078 KRTAP9-3Q9BYQ3 159 aa4.21□□□□□ -1.74
CNOT2-243ENST00000553078 MT1BP07438 61 aa4.2□□□□□ -1.74
CNOT2-243ENST00000553078 LUZP6Q538Z0 58 aa4.17□□□□□ -1.74
CNOT2-243ENST00000553078 LCE2AQ5TA79 106 aaPredicted RBP4.15□□□□□ -1.75
CNOT2-243ENST00000553078 KRTAP10-12P60413 245 aa4.13□□□□□ -1.75
CNOT2-243ENST00000553078 MT1XP80297 61 aa4.13□□□□□ -1.75
CNOT2-243ENST00000553078 KRTAP10-5P60370 271 aa4.12□□□□□ -1.75
CNOT2-243ENST00000553078 LCE3AQ5TA76 89 aa4.12□□□□□ -1.75
CNOT2-243ENST00000553078 KRTAP9-2Q9BYQ4 174 aa4.12□□□□□ -1.75
CNOT2-243ENST00000553078 NDUFAF8A1L188 74 aa4.09□□□□□ -1.75
CNOT2-243ENST00000553078 KRTAP8-1Q8IUC2 63 aa4.04□□□□□ -1.76
CNOT2-243ENST00000553078 LCE2BO14633 110 aa4.03□□□□□ -1.76
CNOT2-243ENST00000553078 H3BS24 57 aa4.02□□□□□ -1.77
CNOT2-243ENST00000553078 KRTAP12-3P60328 96 aa3.98□□□□□ -1.77
CNOT2-243ENST00000553078 KRTAP10-7P60409 375 aaPredicted RBP3.97□□□□□ -1.77
CNOT2-243ENST00000553078 SPRR5A0A1B0GTR4 108 aa3.92□□□□□ -1.78
CNOT2-243ENST00000553078 KRTAP19-5Q3LI72 72 aa3.82□□□□□ -1.8
CNOT2-243ENST00000553078 A0A0A0MQY5 61 aa3.81□□□□□ -1.8
CNOT2-243ENST00000553078 KRTAP19-6Q3LI70 58 aa3.8□□□□□ -1.8
CNOT2-243ENST00000553078 KRTAP9-7A8MTY7 169 aa3.79□□□□□ -1.8
CNOT2-243ENST00000553078 KRTAP19-4Q3LI73 84 aa3.79□□□□□ -1.8
CNOT2-243ENST00000553078 LCE2DQ5TA82 110 aaPredicted RBP3.76□□□□□ -1.81
CNOT2-243ENST00000553078 LCE3CQ5T5A8 94 aa3.71□□□□□ -1.82
CNOT2-243ENST00000553078 FSIP2Q5CZC0 6907 aa3.71□□□□□ -1.82
CNOT2-243ENST00000553078 KRTAP4-8A0A0G2JLE6 195 aa3.7□□□□□ -1.82
CNOT2-243ENST00000553078 KRTAP4-8Q9BYQ9 185 aa3.7□□□□□ -1.82
CNOT2-243ENST00000553078 CRCT1Q9UGL9 99 aa3.7□□□□□ -1.82
CNOT2-243ENST00000553078 USH2AO75445 5202 aa3.7□□□□□ -1.82
CNOT2-243ENST00000553078 KRTAP19-7Q3SYF9 63 aa3.66□□□□□ -1.82
CNOT2-243ENST00000553078 MT1EP04732 61 aa3.63□□□□□ -1.83
CNOT2-243ENST00000553078 SSPOA2VEC9 5147 aa3.62□□□□□ -1.83
CNOT2-243ENST00000553078 MT1LQ93083 61 aa3.6□□□□□ -1.83
CNOT2-243ENST00000553078 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms