RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 SMIM26A0A096LP01 95 aa7.17□□□□□ -1.26
LETMD1-229ENST00000551261 KRTAP4-1Q9BYQ7 146 aa7.16□□□□□ -1.26
LETMD1-229ENST00000551261 V9GYY9 64 aa7.13□□□□□ -1.27
LETMD1-229ENST00000551261 S4R3F8 94 aa7.12□□□□□ -1.27
LETMD1-229ENST00000551261 Q1T7F1 81 aa7.04□□□□□ -1.28
LETMD1-229ENST00000551261 LCA10Q71F78 164 aa7.04□□□□□ -1.28
LETMD1-229ENST00000551261 RNF213Q63HN8 5207 aa7.04□□□□□ -1.28
LETMD1-229ENST00000551261 KRTAP19-2Q3LHN2 52 aa7.02□□□□□ -1.29
LETMD1-229ENST00000551261 LINC01558Q9Y6Z2 57 aa7□□□□□ -1.29
LETMD1-229ENST00000551261 CSAG1Q6PB30 78 aa6.99□□□□□ -1.29
LETMD1-229ENST00000551261 MUC2Q02817 5179 aa6.99□□□□□ -1.29
LETMD1-229ENST00000551261 PRR15LQ9BU68 103 aa6.98□□□□□ -1.29
LETMD1-229ENST00000551261 SEC61GP60059 68 aa6.96□□□□□ -1.3
LETMD1-229ENST00000551261 A0A1B0GU69 56 aa6.92□□□□□ -1.3
LETMD1-229ENST00000551261 H0YAA0 97 aa6.9□□□□□ -1.3
LETMD1-229ENST00000551261 FLGP20930 4061 aaPredicted RBP6.88□□□□□ -1.31
LETMD1-229ENST00000551261 LCE2CQ5TA81 110 aa6.88□□□□□ -1.31
LETMD1-229ENST00000551261 PSPHP1O15172 72 aa6.81□□□□□ -1.32
LETMD1-229ENST00000551261 Q5VV11 94 aa6.8□□□□□ -1.32
LETMD1-229ENST00000551261 FAT4Q6V0I7 4981 aa6.8□□□□□ -1.32
LETMD1-229ENST00000551261 MT1HP80294 61 aa6.79□□□□□ -1.32
LETMD1-229ENST00000551261 M0R2T5 61 aa6.75□□□□□ -1.33
LETMD1-229ENST00000551261 ADM2Q7Z4H4 148 aa6.74□□□□□ -1.33
LETMD1-229ENST00000551261 UQCR11O14957 56 aa6.73□□□□□ -1.33
LETMD1-229ENST00000551261 A0A1B0GU33 70 aa6.71□□□□□ -1.34
LETMD1-229ENST00000551261 KRTAP10-6P60371 365 aaPredicted RBP6.71□□□□□ -1.34
LETMD1-229ENST00000551261 A6NED7 52 aa6.69□□□□□ -1.34
LETMD1-229ENST00000551261 CRIPTQ9P021 101 aa6.66□□□□□ -1.34
LETMD1-229ENST00000551261 M0QZ58 72 aa6.64□□□□□ -1.35
LETMD1-229ENST00000551261 P0C880 135 aa6.64□□□□□ -1.35
LETMD1-229ENST00000551261 MIR22HGQ0VDD5 57 aa6.6□□□□□ -1.35
LETMD1-229ENST00000551261 CDC42SE1Q9NRR8 79 aa6.6□□□□□ -1.35
LETMD1-229ENST00000551261 LCE2AQ5TA79 106 aaPredicted RBP6.58□□□□□ -1.36
LETMD1-229ENST00000551261 SPATA8Q6RVD6 105 aa6.58□□□□□ -1.36
LETMD1-229ENST00000551261 R4GN34 69 aa6.58□□□□□ -1.36
LETMD1-229ENST00000551261 LCE2BO14633 110 aa6.57□□□□□ -1.36
LETMD1-229ENST00000551261 BRK1Q8WUW1 75 aa6.53□□□□□ -1.36
LETMD1-229ENST00000551261 LORP23490 312 aaPredicted RBP6.52□□□□□ -1.37
LETMD1-229ENST00000551261 KRTAP9-8Q9BYQ0 159 aa6.51□□□□□ -1.37
LETMD1-229ENST00000551261 MT2AP02795 61 aa6.5□□□□□ -1.37
LETMD1-229ENST00000551261 KRTAP9-6A0A140TA67 174 aa6.49□□□□□ -1.37
LETMD1-229ENST00000551261 KRTAP13-4Q3LI77 160 aa6.47□□□□□ -1.37
LETMD1-229ENST00000551261 KRTAP9-2Q9BYQ4 174 aa6.47□□□□□ -1.37
LETMD1-229ENST00000551261 KRTAP10-10P60014 251 aa6.45□□□□□ -1.38
LETMD1-229ENST00000551261 A6NN06 94 aa6.43□□□□□ -1.38
LETMD1-229ENST00000551261 K7ERS5 55 aa6.43□□□□□ -1.38
LETMD1-229ENST00000551261 MT1FP04733 61 aa6.43□□□□□ -1.38
LETMD1-229ENST00000551261 PRO0628Q9UI54 55 aa6.43□□□□□ -1.38
LETMD1-229ENST00000551261 SPRR2GQ9BYE4 73 aa6.42□□□□□ -1.38
LETMD1-229ENST00000551261 A8MU10 97 aa6.37□□□□□ -1.39
LETMD1-229ENST00000551261 A0A0D9SG42 100 aa6.36□□□□□ -1.39
LETMD1-229ENST00000551261 LINC01554Q52M75 96 aa6.34□□□□□ -1.39
LETMD1-229ENST00000551261 KRTAP19-1Q8IUB9 90 aa6.32□□□□□ -1.4
LETMD1-229ENST00000551261 KRTAP9-3Q9BYQ3 159 aa6.29□□□□□ -1.4
LETMD1-229ENST00000551261 KRTAP12-1P59990 96 aa6.28□□□□□ -1.4
LETMD1-229ENST00000551261 SPINT4Q6UDR6 99 aa6.26□□□□□ -1.41
LETMD1-229ENST00000551261 KRTAP19-8Q3LI54 63 aa6.25□□□□□ -1.41
LETMD1-229ENST00000551261 KRTAP12-2P59991 146 aa6.23□□□□□ -1.41
LETMD1-229ENST00000551261 PLAC4Q8WY50 150 aa6.21□□□□□ -1.42
LETMD1-229ENST00000551261 PMAIP1Q13794 54 aa6.2□□□□□ -1.42
LETMD1-229ENST00000551261 CAMK2N1Q7Z7J9 78 aa6.15□□□□□ -1.42
LETMD1-229ENST00000551261 MT1BP07438 61 aa6.09□□□□□ -1.43
LETMD1-229ENST00000551261 ROMO1P60602 79 aa6.06□□□□□ -1.44
LETMD1-229ENST00000551261 FSIP2Q5CZC0 6907 aa6.03□□□□□ -1.44
LETMD1-229ENST00000551261 PRO2289Q9P1D8 64 aa6.01□□□□□ -1.45
LETMD1-229ENST00000551261 LOC100996750A0A140TA64 210 aa5.99□□□□□ -1.45
LETMD1-229ENST00000551261 KRTAP4-6Q9BYQ5 205 aa5.99□□□□□ -1.45
LETMD1-229ENST00000551261 KTN1-AS1Q86SY8 53 aa5.97□□□□□ -1.45
LETMD1-229ENST00000551261 CRCT1Q9UGL9 99 aa5.97□□□□□ -1.45
LETMD1-229ENST00000551261 USH2AO75445 5202 aa5.95□□□□□ -1.46
LETMD1-229ENST00000551261 C10orf95Q9H7T3 257 aa5.92□□□□□ -1.46
LETMD1-229ENST00000551261 KRTAP25-1Q3LHN0 102 aa5.91□□□□□ -1.46
LETMD1-229ENST00000551261 MT1XP80297 61 aa5.89□□□□□ -1.47
LETMD1-229ENST00000551261 KRTAP10-5P60370 271 aa5.88□□□□□ -1.47
LETMD1-229ENST00000551261 TNP1P09430 55 aa5.87□□□□□ -1.47
LETMD1-229ENST00000551261 KRTAP19-6Q3LI70 58 aa5.82□□□□□ -1.48
LETMD1-229ENST00000551261 SSPOA2VEC9 5147 aa5.77□□□□□ -1.49
LETMD1-229ENST00000551261 KRTAP23-1A1A580 65 aa5.76□□□□□ -1.49
LETMD1-229ENST00000551261 KRTAP9-7A8MTY7 169 aa5.76□□□□□ -1.49
LETMD1-229ENST00000551261 PP632Q6XCG6 107 aa5.75□□□□□ -1.49
LETMD1-229ENST00000551261 SVIPQ8NHG7 77 aa5.71□□□□□ -1.5
LETMD1-229ENST00000551261 PRAC1Q96KF2 57 aa5.69□□□□□ -1.5
LETMD1-229ENST00000551261 KRTAP10-12P60413 245 aa5.65□□□□□ -1.5
LETMD1-229ENST00000551261 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.62□□□□□ -1.51
LETMD1-229ENST00000551261 KRTAP10-7P60409 375 aaPredicted RBP5.6□□□□□ -1.51
LETMD1-229ENST00000551261 FCGBPQ9Y6R7 5405 aaPredicted RBP5.53□□□□□ -1.52
LETMD1-229ENST00000551261 LCE3AQ5TA76 89 aa5.52□□□□□ -1.53
LETMD1-229ENST00000551261 KRTAP8-1Q8IUC2 63 aa5.49□□□□□ -1.53
LETMD1-229ENST00000551261 KRTAP4-8Q9BYQ9 185 aa5.45□□□□□ -1.54
LETMD1-229ENST00000551261 KRTAP12-3P60328 96 aa5.36□□□□□ -1.55
LETMD1-229ENST00000551261 KRTAP4-8A0A0G2JLE6 195 aa5.34□□□□□ -1.55
LETMD1-229ENST00000551261 MACF1Q9UPN3 7388 aaKnown RBP5.31□□□□□ -1.56
LETMD1-229ENST00000551261 KMT2DO14686 5537 aa5.3□□□□□ -1.56
LETMD1-229ENST00000551261 KRTAP19-5Q3LI72 72 aa5.29□□□□□ -1.56
LETMD1-229ENST00000551261 SYNE2Q8WXH0 6885 aaKnown RBP5.27□□□□□ -1.57
LETMD1-229ENST00000551261 KRTAP19-4Q3LI73 84 aa5.25□□□□□ -1.57
LETMD1-229ENST00000551261 KRTAP15-1Q3LI76 137 aa5.25□□□□□ -1.57
LETMD1-229ENST00000551261 KRTAP19-7Q3SYF9 63 aa5.25□□□□□ -1.57
LETMD1-229ENST00000551261 LCE3BQ5TA77 95 aa5.24□□□□□ -1.57
LETMD1-229ENST00000551261 MT1EP04732 61 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms