RNA–Protein interactions for RNA: ENST00000550442.5

LETMD1-223, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-223ENST00000550442 MUC2Q02817 5179 aa6.49□□□□□ -1.37
LETMD1-223ENST00000550442 KRTAP10-8P60410 259 aa6.47□□□□□ -1.37
LETMD1-223ENST00000550442 LPAP08519 4548 aa6.46□□□□□ -1.38
LETMD1-223ENST00000550442 LCE2AQ5TA79 106 aaPredicted RBP6.44□□□□□ -1.38
LETMD1-223ENST00000550442 ATP11AUNQ6ZP68 121 aa6.44□□□□□ -1.38
LETMD1-223ENST00000550442 A6NED7 52 aa6.43□□□□□ -1.38
LETMD1-223ENST00000550442 CDC42SE1Q9NRR8 79 aa6.43□□□□□ -1.38
LETMD1-223ENST00000550442 RETNLBQ9BQ08 111 aa6.4□□□□□ -1.38
LETMD1-223ENST00000550442 A0A1B0GU69 56 aa6.39□□□□□ -1.39
LETMD1-223ENST00000550442 CRCT1Q9UGL9 99 aa6.39□□□□□ -1.39
LETMD1-223ENST00000550442 SEC61GP60059 68 aa6.38□□□□□ -1.39
LETMD1-223ENST00000550442 LOC100996750A0A140TA64 210 aa6.35□□□□□ -1.39
LETMD1-223ENST00000550442 KRTAP4-6Q9BYQ5 205 aa6.35□□□□□ -1.39
LETMD1-223ENST00000550442 SPINK7P58062 85 aa6.34□□□□□ -1.39
LETMD1-223ENST00000550442 C9orf92A6NGG3 77 aa6.33□□□□□ -1.4
LETMD1-223ENST00000550442 UQCR11O14957 56 aa6.32□□□□□ -1.4
LETMD1-223ENST00000550442 COX6B2Q6YFQ2 88 aa6.3□□□□□ -1.4
LETMD1-223ENST00000550442 RPL37P61927 97 aaKnown RBP6.29□□□□□ -1.4
LETMD1-223ENST00000550442 LCA10Q71F78 164 aa6.29□□□□□ -1.4
LETMD1-223ENST00000550442 FSIP2Q5CZC0 6907 aa6.28□□□□□ -1.4
LETMD1-223ENST00000550442 PMAIP1Q13794 54 aa6.28□□□□□ -1.4
LETMD1-223ENST00000550442 SPATA8Q6RVD6 105 aa6.28□□□□□ -1.4
LETMD1-223ENST00000550442 MIR22HGQ0VDD5 57 aa6.21□□□□□ -1.42
LETMD1-223ENST00000550442 TPRXLQ17RH7 258 aa6.21□□□□□ -1.42
LETMD1-223ENST00000550442 XP32Q5T750 250 aa6.19□□□□□ -1.42
LETMD1-223ENST00000550442 KRTAP3-1Q9BYR8 98 aa6.17□□□□□ -1.42
LETMD1-223ENST00000550442 A6NN06 94 aa6.16□□□□□ -1.42
LETMD1-223ENST00000550442 KTN1-AS1Q86SY8 53 aa6.15□□□□□ -1.42
LETMD1-223ENST00000550442 A0A1B0GU33 70 aa6.1□□□□□ -1.43
LETMD1-223ENST00000550442 KRTAP9-7A8MTY7 169 aa6.09□□□□□ -1.43
LETMD1-223ENST00000550442 RBM12B-AS1Q9P1G2 102 aa6.08□□□□□ -1.44
LETMD1-223ENST00000550442 A8MU10 97 aa6.07□□□□□ -1.44
LETMD1-223ENST00000550442 H1FX-AS1Q4G0G2 97 aa6.06□□□□□ -1.44
LETMD1-223ENST00000550442 K7ERS5 55 aa6.04□□□□□ -1.44
LETMD1-223ENST00000550442 S4R3F8 94 aa6.04□□□□□ -1.44
LETMD1-223ENST00000550442 SEC61BP60468 96 aaKnown RBP6.02□□□□□ -1.45
LETMD1-223ENST00000550442 MUC17Q685J3 4493 aa6.02□□□□□ -1.45
LETMD1-223ENST00000550442 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.97□□□□□ -1.45
LETMD1-223ENST00000550442 LCE2CQ5TA81 110 aa5.97□□□□□ -1.45
LETMD1-223ENST00000550442 CSAG1Q6PB30 78 aa5.95□□□□□ -1.46
LETMD1-223ENST00000550442 H0YAA0 97 aa5.94□□□□□ -1.46
LETMD1-223ENST00000550442 M0QZ58 72 aa5.87□□□□□ -1.47
LETMD1-223ENST00000550442 KRTAP10-6P60371 365 aaPredicted RBP5.87□□□□□ -1.47
LETMD1-223ENST00000550442 LORP23490 312 aaPredicted RBP5.86□□□□□ -1.47
LETMD1-223ENST00000550442 KRTAP4-1Q9BYQ7 146 aa5.78□□□□□ -1.48
LETMD1-223ENST00000550442 ADM2Q7Z4H4 148 aa5.76□□□□□ -1.49
LETMD1-223ENST00000550442 MT1HP80294 61 aa5.75□□□□□ -1.49
LETMD1-223ENST00000550442 KRTAP4-8Q9BYQ9 185 aa5.73□□□□□ -1.49
LETMD1-223ENST00000550442 ROMO1P60602 79 aa5.71□□□□□ -1.5
LETMD1-223ENST00000550442 M0R2T5 61 aa5.69□□□□□ -1.5
LETMD1-223ENST00000550442 P0C880 135 aa5.69□□□□□ -1.5
LETMD1-223ENST00000550442 KRTAP19-2Q3LHN2 52 aa5.65□□□□□ -1.5
LETMD1-223ENST00000550442 LINC01554Q52M75 96 aa5.65□□□□□ -1.5
LETMD1-223ENST00000550442 SSPOA2VEC9 5147 aa5.65□□□□□ -1.51
LETMD1-223ENST00000550442 KRTAP25-1Q3LHN0 102 aa5.64□□□□□ -1.51
LETMD1-223ENST00000550442 KRTAP13-4Q3LI77 160 aa5.64□□□□□ -1.51
LETMD1-223ENST00000550442 FCGBPQ9Y6R7 5405 aaPredicted RBP5.63□□□□□ -1.51
LETMD1-223ENST00000550442 PRAC1Q96KF2 57 aa5.63□□□□□ -1.51
LETMD1-223ENST00000550442 USH2AO75445 5202 aa5.62□□□□□ -1.51
LETMD1-223ENST00000550442 CRIPTQ9P021 101 aa5.62□□□□□ -1.51
LETMD1-223ENST00000550442 R4GN34 69 aa5.61□□□□□ -1.51
LETMD1-223ENST00000550442 A0A0D9SG42 100 aa5.6□□□□□ -1.51
LETMD1-223ENST00000550442 KRTAP12-1P59990 96 aa5.56□□□□□ -1.52
LETMD1-223ENST00000550442 SYNE2Q8WXH0 6885 aaKnown RBP5.52□□□□□ -1.53
LETMD1-223ENST00000550442 KRTAP12-2P59991 146 aa5.51□□□□□ -1.53
LETMD1-223ENST00000550442 SPINT4Q6UDR6 99 aa5.51□□□□□ -1.53
LETMD1-223ENST00000550442 FLGP20930 4061 aaPredicted RBP5.5□□□□□ -1.53
LETMD1-223ENST00000550442 MACF1Q9UPN3 7388 aaKnown RBP5.48□□□□□ -1.53
LETMD1-223ENST00000550442 LCE3BQ5TA77 95 aa5.48□□□□□ -1.53
LETMD1-223ENST00000550442 KRTAP19-1Q8IUB9 90 aa5.48□□□□□ -1.53
LETMD1-223ENST00000550442 KRTAP6-3Q3LI67 103 aa5.38□□□□□ -1.55
LETMD1-223ENST00000550442 KRTAP4-12Q9BQ66 201 aa5.35□□□□□ -1.55
LETMD1-223ENST00000550442 PP632Q6XCG6 107 aa5.34□□□□□ -1.55
LETMD1-223ENST00000550442 KRTAP9-9Q9BYP9 154 aa5.34□□□□□ -1.55
LETMD1-223ENST00000550442 KRTAP9-4Q9BYQ2 154 aa5.34□□□□□ -1.55
LETMD1-223ENST00000550442 KRTAP9-8Q9BYQ0 159 aa5.33□□□□□ -1.56
LETMD1-223ENST00000550442 KRTAP4-8A0A0G2JLE6 195 aa5.32□□□□□ -1.56
LETMD1-223ENST00000550442 KRTAP23-1A1A580 65 aa5.29□□□□□ -1.56
LETMD1-223ENST00000550442 KRTAP20-1Q3LI63 56 aa5.29□□□□□ -1.56
LETMD1-223ENST00000550442 CAMK2N1Q7Z7J9 78 aa5.29□□□□□ -1.56
LETMD1-223ENST00000550442 NEBP20929 6669 aa5.25□□□□□ -1.57
LETMD1-223ENST00000550442 SPRR2GQ9BYE4 73 aa5.24□□□□□ -1.57
LETMD1-223ENST00000550442 KRTAP19-6Q3LI70 58 aa5.23□□□□□ -1.57
LETMD1-223ENST00000550442 MT2AP02795 61 aa5.21□□□□□ -1.58
LETMD1-223ENST00000550442 C10orf95Q9H7T3 257 aa5.21□□□□□ -1.58
LETMD1-223ENST00000550442 PLAC4Q8WY50 150 aa5.2□□□□□ -1.58
LETMD1-223ENST00000550442 MUC12Q9UKN1 5478 aa5.18□□□□□ -1.58
LETMD1-223ENST00000550442 KRTAP9-3Q9BYQ3 159 aa5.18□□□□□ -1.58
LETMD1-223ENST00000550442 KRTAP10-10P60014 251 aa5.17□□□□□ -1.58
LETMD1-223ENST00000550442 MT1FP04733 61 aa5.16□□□□□ -1.58
LETMD1-223ENST00000550442 TNP1P09430 55 aa5.16□□□□□ -1.58
LETMD1-223ENST00000550442 KRTAP4-7Q9BYR0 210 aa5.16□□□□□ -1.58
LETMD1-223ENST00000550442 LCE1DQ5T752 114 aa5.1□□□□□ -1.59
LETMD1-223ENST00000550442 KRTAP19-8Q3LI54 63 aa5.04□□□□□ -1.6
LETMD1-223ENST00000550442 KRTAP15-1Q3LI76 137 aa5.03□□□□□ -1.6
LETMD1-223ENST00000550442 KRTAP2-3P0C7H8 128 aa4.99□□□□□ -1.61
LETMD1-223ENST00000550442 KRTAP2-4Q9BYR9 128 aa4.99□□□□□ -1.61
LETMD1-223ENST00000550442 KRTAP4-9Q9BYQ8 210 aa4.97□□□□□ -1.61
LETMD1-223ENST00000550442 MDN1Q9NU22 5596 aa4.97□□□□□ -1.61
LETMD1-223ENST00000550442 KMT2DO14686 5537 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms