RNA–Protein interactions for RNA: ENST00000549940.5

GNPTAB-206, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 1 (best) BASIC

Gene GNPTAB, Length 1,678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-206ENST00000549940 LCA10Q71F78 164 aa13.67□□□□□ -0.22
GNPTAB-206ENST00000549940 SPTSSBQ8NFR3 76 aa13.67□□□□□ -0.22
GNPTAB-206ENST00000549940 FLGP20930 4061 aaPredicted RBP13.57□□□□□ -0.24
GNPTAB-206ENST00000549940 SMIM26A0A096LP01 95 aa13.56□□□□□ -0.24
GNPTAB-206ENST00000549940 KRTAP3-3Q9BYR6 98 aa13.55□□□□□ -0.24
GNPTAB-206ENST00000549940 LCE2CQ5TA81 110 aa13.53□□□□□ -0.24
GNPTAB-206ENST00000549940 CSAG1Q6PB30 78 aa13.5□□□□□ -0.25
GNPTAB-206ENST00000549940 FAT4Q6V0I7 4981 aa13.43□□□□□ -0.26
GNPTAB-206ENST00000549940 V9GYY9 64 aa13.37□□□□□ -0.27
GNPTAB-206ENST00000549940 Q1T7F1 81 aa13.34□□□□□ -0.27
GNPTAB-206ENST00000549940 MT1HP80294 61 aa13.31□□□□□ -0.28
GNPTAB-206ENST00000549940 LINC01558Q9Y6Z2 57 aa13.31□□□□□ -0.28
GNPTAB-206ENST00000549940 M0R2T5 61 aa13.29□□□□□ -0.28
GNPTAB-206ENST00000549940 SEC61GP60059 68 aa13.27□□□□□ -0.29
GNPTAB-206ENST00000549940 A0A1B0GU69 56 aa13.23□□□□□ -0.29
GNPTAB-206ENST00000549940 PRR15LQ9BU68 103 aa13.2□□□□□ -0.3
GNPTAB-206ENST00000549940 PSPHP1O15172 72 aa13.14□□□□□ -0.31
GNPTAB-206ENST00000549940 H0YAA0 97 aa13.12□□□□□ -0.31
GNPTAB-206ENST00000549940 ADM2Q7Z4H4 148 aa13.11□□□□□ -0.31
GNPTAB-206ENST00000549940 KRTAP3-2Q9BYR7 98 aa13.02□□□□□ -0.33
GNPTAB-206ENST00000549940 KRTAP10-6P60371 365 aaPredicted RBP12.99□□□□□ -0.33
GNPTAB-206ENST00000549940 Q5VV11 94 aa12.97□□□□□ -0.33
GNPTAB-206ENST00000549940 P0C880 135 aa12.96□□□□□ -0.33
GNPTAB-206ENST00000549940 LCE2AQ5TA79 106 aaPredicted RBP12.91□□□□□ -0.34
GNPTAB-206ENST00000549940 A0A1B0GU33 70 aa12.89□□□□□ -0.35
GNPTAB-206ENST00000549940 UQCR11O14957 56 aa12.79□□□□□ -0.36
GNPTAB-206ENST00000549940 A6NED7 52 aa12.77□□□□□ -0.36
GNPTAB-206ENST00000549940 LORP23490 312 aaPredicted RBP12.77□□□□□ -0.36
GNPTAB-206ENST00000549940 KRTAP9-8Q9BYQ0 159 aa12.77□□□□□ -0.36
GNPTAB-206ENST00000549940 MT2AP02795 61 aa12.73□□□□□ -0.37
GNPTAB-206ENST00000549940 KRTAP10-10P60014 251 aa12.7□□□□□ -0.38
GNPTAB-206ENST00000549940 R4GN34 69 aa12.7□□□□□ -0.38
GNPTAB-206ENST00000549940 M0QZ58 72 aa12.67□□□□□ -0.38
GNPTAB-206ENST00000549940 CRIPTQ9P021 101 aa12.67□□□□□ -0.38
GNPTAB-206ENST00000549940 MT1FP04733 61 aa12.64□□□□□ -0.39
GNPTAB-206ENST00000549940 SPATA8Q6RVD6 105 aa12.64□□□□□ -0.39
GNPTAB-206ENST00000549940 MIR22HGQ0VDD5 57 aa12.61□□□□□ -0.39
GNPTAB-206ENST00000549940 KRTAP13-4Q3LI77 160 aa12.6□□□□□ -0.39
GNPTAB-206ENST00000549940 CDC42SE1Q9NRR8 79 aa12.48□□□□□ -0.41
GNPTAB-206ENST00000549940 BRK1Q8WUW1 75 aa12.46□□□□□ -0.41
GNPTAB-206ENST00000549940 LINC01554Q52M75 96 aa12.45□□□□□ -0.42
GNPTAB-206ENST00000549940 A0A0D9SG42 100 aa12.43□□□□□ -0.42
GNPTAB-206ENST00000549940 A8MU10 97 aa12.42□□□□□ -0.42
GNPTAB-206ENST00000549940 SPRR2GQ9BYE4 73 aa12.39□□□□□ -0.43
GNPTAB-206ENST00000549940 KRTAP19-1Q8IUB9 90 aa12.34□□□□□ -0.43
GNPTAB-206ENST00000549940 KRTAP9-3Q9BYQ3 159 aa12.32□□□□□ -0.44
GNPTAB-206ENST00000549940 SPINT4Q6UDR6 99 aa12.18□□□□□ -0.46
GNPTAB-206ENST00000549940 A6NN06 94 aa12.17□□□□□ -0.46
GNPTAB-206ENST00000549940 K7ERS5 55 aa12.16□□□□□ -0.46
GNPTAB-206ENST00000549940 KRTAP12-1P59990 96 aa12.13□□□□□ -0.47
GNPTAB-206ENST00000549940 KRTAP12-2P59991 146 aa12.1□□□□□ -0.47
GNPTAB-206ENST00000549940 KRTAP19-8Q3LI54 63 aa12.08□□□□□ -0.48
GNPTAB-206ENST00000549940 PRO0628Q9UI54 55 aa12.04□□□□□ -0.48
GNPTAB-206ENST00000549940 PLAC4Q8WY50 150 aa12.03□□□□□ -0.48
GNPTAB-206ENST00000549940 LCE2BO14633 110 aa12□□□□□ -0.49
GNPTAB-206ENST00000549940 MT1BP07438 61 aa11.91□□□□□ -0.5
GNPTAB-206ENST00000549940 CAMK2N1Q7Z7J9 78 aa11.88□□□□□ -0.51
GNPTAB-206ENST00000549940 LCE2DQ5TA82 110 aaPredicted RBP11.84□□□□□ -0.51
GNPTAB-206ENST00000549940 USH2AO75445 5202 aa11.8□□□□□ -0.52
GNPTAB-206ENST00000549940 PMAIP1Q13794 54 aa11.78□□□□□ -0.52
GNPTAB-206ENST00000549940 ROMO1P60602 79 aa11.55□□□□□ -0.56
GNPTAB-206ENST00000549940 PRO2289Q9P1D8 64 aa11.52□□□□□ -0.57
GNPTAB-206ENST00000549940 MT1XP80297 61 aa11.49□□□□□ -0.57
GNPTAB-206ENST00000549940 KRTAP9-2Q9BYQ4 174 aa11.49□□□□□ -0.57
GNPTAB-206ENST00000549940 C10orf95Q9H7T3 257 aa11.49□□□□□ -0.57
GNPTAB-206ENST00000549940 KRTAP10-5P60370 271 aa11.46□□□□□ -0.57
GNPTAB-206ENST00000549940 FSIP2Q5CZC0 6907 aa11.44□□□□□ -0.58
GNPTAB-206ENST00000549940 SSPOA2VEC9 5147 aa11.43□□□□□ -0.58
GNPTAB-206ENST00000549940 KRTAP19-6Q3LI70 58 aa11.35□□□□□ -0.59
GNPTAB-206ENST00000549940 TNP1P09430 55 aa11.26□□□□□ -0.61
GNPTAB-206ENST00000549940 KRTAP25-1Q3LHN0 102 aa11.21□□□□□ -0.61
GNPTAB-206ENST00000549940 KTN1-AS1Q86SY8 53 aa11.19□□□□□ -0.62
GNPTAB-206ENST00000549940 CRCT1Q9UGL9 99 aa11.08□□□□□ -0.64
GNPTAB-206ENST00000549940 KRTAP10-7P60409 375 aaPredicted RBP11.02□□□□□ -0.64
GNPTAB-206ENST00000549940 FCGBPQ9Y6R7 5405 aaPredicted RBP11□□□□□ -0.65
GNPTAB-206ENST00000549940 PRAC1Q96KF2 57 aa11□□□□□ -0.65
GNPTAB-206ENST00000549940 KRTAP10-12P60413 245 aa10.92□□□□□ -0.66
GNPTAB-206ENST00000549940 KRTAP23-1A1A580 65 aa10.81□□□□□ -0.68
GNPTAB-206ENST00000549940 PP632Q6XCG6 107 aa10.8□□□□□ -0.68
GNPTAB-206ENST00000549940 LCE3AQ5TA76 89 aa10.76□□□□□ -0.69
GNPTAB-206ENST00000549940 KRTAP9-6A0A140TA67 174 aa10.68□□□□□ -0.7
GNPTAB-206ENST00000549940 KMT2DO14686 5537 aa10.68□□□□□ -0.7
GNPTAB-206ENST00000549940 SVIPQ8NHG7 77 aa10.67□□□□□ -0.7
GNPTAB-206ENST00000549940 KRTAP4-8A0A0G2JLE6 195 aa10.64□□□□□ -0.71
GNPTAB-206ENST00000549940 KRTAP4-8Q9BYQ9 185 aa10.64□□□□□ -0.71
GNPTAB-206ENST00000549940 KRTAP8-1Q8IUC2 63 aa10.51□□□□□ -0.73
GNPTAB-206ENST00000549940 MACF1Q9UPN3 7388 aaKnown RBP10.48□□□□□ -0.73
GNPTAB-206ENST00000549940 KRTAP19-5Q3LI72 72 aa10.36□□□□□ -0.75
GNPTAB-206ENST00000549940 KRTAP12-3P60328 96 aa10.35□□□□□ -0.75
GNPTAB-206ENST00000549940 KRTAP19-7Q3SYF9 63 aa10.25□□□□□ -0.77
GNPTAB-206ENST00000549940 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.23□□□□□ -0.77
GNPTAB-206ENST00000549940 SYNE2Q8WXH0 6885 aaKnown RBP10.2□□□□□ -0.78
GNPTAB-206ENST00000549940 MT1EP04732 61 aa10.1□□□□□ -0.79
GNPTAB-206ENST00000549940 KRTAP15-1Q3LI76 137 aa10.1□□□□□ -0.79
GNPTAB-206ENST00000549940 SPRR2FQ96RM1 72 aa10.1□□□□□ -0.79
GNPTAB-206ENST00000549940 KRTAP5-9P26371 169 aa10□□□□□ -0.81
GNPTAB-206ENST00000549940 KRTAP6-3Q3LI67 103 aa9.96□□□□□ -0.82
GNPTAB-206ENST00000549940 MUC12Q9UKN1 5478 aa9.95□□□□□ -0.82
GNPTAB-206ENST00000549940 MT1LQ93083 61 aa9.87□□□□□ -0.83
GNPTAB-206ENST00000549940 KRTAP19-3Q7Z4W3 81 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms