RNA–Protein interactions for RNA: ENST00000549621.5

RITA1-202, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RITA1, Length 2,041 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-202ENST00000549621 A8MU10 97 aa11.06□□□□□ -0.64
RITA1-202ENST00000549621 LCA10Q71F78 164 aa11.01□□□□□ -0.65
RITA1-202ENST00000549621 CDC42SE1Q9NRR8 79 aa10.96□□□□□ -0.65
RITA1-202ENST00000549621 KRTAP3-3Q9BYR6 98 aa10.96□□□□□ -0.66
RITA1-202ENST00000549621 SEC61BP60468 96 aaKnown RBP10.95□□□□□ -0.66
RITA1-202ENST00000549621 SEC61GP60059 68 aa10.92□□□□□ -0.66
RITA1-202ENST00000549621 S4R3F8 94 aa10.92□□□□□ -0.66
RITA1-202ENST00000549621 H1FX-AS1Q4G0G2 97 aa10.91□□□□□ -0.66
RITA1-202ENST00000549621 RBM12B-AS1Q9P1G2 102 aa10.88□□□□□ -0.67
RITA1-202ENST00000549621 UQCR11O14957 56 aa10.84□□□□□ -0.67
RITA1-202ENST00000549621 KRTAP4-1Q9BYQ7 146 aa10.82□□□□□ -0.68
RITA1-202ENST00000549621 SPATA8Q6RVD6 105 aa10.79□□□□□ -0.68
RITA1-202ENST00000549621 PCLOQ9Y6V0 5065 aa10.77□□□□□ -0.68
RITA1-202ENST00000549621 MIR22HGQ0VDD5 57 aa10.77□□□□□ -0.68
RITA1-202ENST00000549621 MUC17Q685J3 4493 aa10.73□□□□□ -0.69
RITA1-202ENST00000549621 A0A1B0GU33 70 aa10.69□□□□□ -0.7
RITA1-202ENST00000549621 KRTAP10-6P60371 365 aaPredicted RBP10.66□□□□□ -0.7
RITA1-202ENST00000549621 KRTAP3-2Q9BYR7 98 aa10.65□□□□□ -0.7
RITA1-202ENST00000549621 H0YAA0 97 aa10.65□□□□□ -0.71
RITA1-202ENST00000549621 PMAIP1Q13794 54 aa10.62□□□□□ -0.71
RITA1-202ENST00000549621 HERC1Q15751 4861 aa10.61□□□□□ -0.71
RITA1-202ENST00000549621 CSAG1Q6PB30 78 aa10.6□□□□□ -0.71
RITA1-202ENST00000549621 KRTAP19-2Q3LHN2 52 aa10.59□□□□□ -0.71
RITA1-202ENST00000549621 HMCN2Q8NDA2 5059 aa10.57□□□□□ -0.72
RITA1-202ENST00000549621 A6NN06 94 aa10.57□□□□□ -0.72
RITA1-202ENST00000549621 P0C880 135 aa10.53□□□□□ -0.72
RITA1-202ENST00000549621 ADM2Q7Z4H4 148 aa10.5□□□□□ -0.73
RITA1-202ENST00000549621 KRTAP13-4Q3LI77 160 aa10.45□□□□□ -0.74
RITA1-202ENST00000549621 MUC2Q02817 5179 aa10.31□□□□□ -0.76
RITA1-202ENST00000549621 KTN1-AS1Q86SY8 53 aa10.29□□□□□ -0.76
RITA1-202ENST00000549621 A0A0D9SG42 100 aa10.24□□□□□ -0.77
RITA1-202ENST00000549621 M0QZ58 72 aa10.19□□□□□ -0.78
RITA1-202ENST00000549621 LCE2CQ5TA81 110 aa10.19□□□□□ -0.78
RITA1-202ENST00000549621 FLGP20930 4061 aaPredicted RBP10.18□□□□□ -0.78
RITA1-202ENST00000549621 K7ERS5 55 aa10.14□□□□□ -0.79
RITA1-202ENST00000549621 LORP23490 312 aaPredicted RBP10.11□□□□□ -0.79
RITA1-202ENST00000549621 R4GN34 69 aa10.06□□□□□ -0.8
RITA1-202ENST00000549621 KRTAP12-2P59991 146 aa10.04□□□□□ -0.8
RITA1-202ENST00000549621 UBR4Q5T4S7 5183 aa10.04□□□□□ -0.8
RITA1-202ENST00000549621 KRTAP12-1P59990 96 aa10.03□□□□□ -0.8
RITA1-202ENST00000549621 RNF213Q63HN8 5207 aa10.01□□□□□ -0.81
RITA1-202ENST00000549621 PRAC1Q96KF2 57 aa10□□□□□ -0.81
RITA1-202ENST00000549621 SPINT4Q6UDR6 99 aa9.95□□□□□ -0.82
RITA1-202ENST00000549621 MT1HP80294 61 aa9.94□□□□□ -0.82
RITA1-202ENST00000549621 LINC01554Q52M75 96 aa9.94□□□□□ -0.82
RITA1-202ENST00000549621 FAT4Q6V0I7 4981 aa9.91□□□□□ -0.82
RITA1-202ENST00000549621 ROMO1P60602 79 aa9.85□□□□□ -0.83
RITA1-202ENST00000549621 M0R2T5 61 aa9.82□□□□□ -0.84
RITA1-202ENST00000549621 CRIPTQ9P021 101 aa9.8□□□□□ -0.84
RITA1-202ENST00000549621 MT2AP02795 61 aa9.64□□□□□ -0.87
RITA1-202ENST00000549621 KRTAP25-1Q3LHN0 102 aa9.63□□□□□ -0.87
RITA1-202ENST00000549621 KRTAP9-8Q9BYQ0 159 aa9.63□□□□□ -0.87
RITA1-202ENST00000549621 MT1FP04733 61 aa9.61□□□□□ -0.87
RITA1-202ENST00000549621 SPRR2GQ9BYE4 73 aa9.58□□□□□ -0.88
RITA1-202ENST00000549621 KRTAP19-1Q8IUB9 90 aa9.56□□□□□ -0.88
RITA1-202ENST00000549621 KRTAP10-10P60014 251 aa9.53□□□□□ -0.88
RITA1-202ENST00000549621 C10orf95Q9H7T3 257 aa9.48□□□□□ -0.89
RITA1-202ENST00000549621 CAMK2N1Q7Z7J9 78 aa9.46□□□□□ -0.89
RITA1-202ENST00000549621 LCE2AQ5TA79 106 aaPredicted RBP9.29□□□□□ -0.92
RITA1-202ENST00000549621 PLAC4Q8WY50 150 aa9.29□□□□□ -0.92
RITA1-202ENST00000549621 KRTAP19-8Q3LI54 63 aa9.28□□□□□ -0.92
RITA1-202ENST00000549621 KRTAP9-3Q9BYQ3 159 aa9.26□□□□□ -0.93
RITA1-202ENST00000549621 MT1BP07438 61 aa9.17□□□□□ -0.94
RITA1-202ENST00000549621 TNP1P09430 55 aa9.05□□□□□ -0.96
RITA1-202ENST00000549621 LCE2BO14633 110 aa8.97□□□□□ -0.97
RITA1-202ENST00000549621 PP632Q6XCG6 107 aa8.95□□□□□ -0.98
RITA1-202ENST00000549621 MT1XP80297 61 aa8.95□□□□□ -0.98
RITA1-202ENST00000549621 KRTAP10-5P60370 271 aa8.94□□□□□ -0.98
RITA1-202ENST00000549621 KRTAP23-1A1A580 65 aa8.85□□□□□ -0.99
RITA1-202ENST00000549621 PRO2289Q9P1D8 64 aa8.7□□□□□ -1.02
RITA1-202ENST00000549621 LCE3AQ5TA76 89 aa8.69□□□□□ -1.02
RITA1-202ENST00000549621 KRTAP15-1Q3LI76 137 aa8.63□□□□□ -1.03
RITA1-202ENST00000549621 KRTAP10-7P60409 375 aaPredicted RBP8.63□□□□□ -1.03
RITA1-202ENST00000549621 KRTAP10-12P60413 245 aa8.58□□□□□ -1.04
RITA1-202ENST00000549621 USH2AO75445 5202 aa8.55□□□□□ -1.04
RITA1-202ENST00000549621 KRTAP8-1Q8IUC2 63 aa8.49□□□□□ -1.05
RITA1-202ENST00000549621 H3BS24 57 aa8.47□□□□□ -1.05
RITA1-202ENST00000549621 SSPOA2VEC9 5147 aa8.3□□□□□ -1.08
RITA1-202ENST00000549621 KRTAP12-3P60328 96 aa8.29□□□□□ -1.08
RITA1-202ENST00000549621 KRTAP19-6Q3LI70 58 aa8.29□□□□□ -1.08
RITA1-202ENST00000549621 LCE2DQ5TA82 110 aaPredicted RBP8.26□□□□□ -1.09
RITA1-202ENST00000549621 KRTAP4-8A0A0G2JLE6 195 aa8.2□□□□□ -1.1
RITA1-202ENST00000549621 KRTAP4-8Q9BYQ9 185 aa8.2□□□□□ -1.1
RITA1-202ENST00000549621 KRTAP19-5Q3LI72 72 aa8.16□□□□□ -1.1
RITA1-202ENST00000549621 SPRR5A0A1B0GTR4 108 aa8.15□□□□□ -1.1
RITA1-202ENST00000549621 FSIP2Q5CZC0 6907 aa8.14□□□□□ -1.11
RITA1-202ENST00000549621 NDUFAF8A1L188 74 aa8.1□□□□□ -1.11
RITA1-202ENST00000549621 KMT2DO14686 5537 aa8.08□□□□□ -1.12
RITA1-202ENST00000549621 KRTAP19-7Q3SYF9 63 aa7.98□□□□□ -1.13
RITA1-202ENST00000549621 LUZP6Q538Z0 58 aa7.95□□□□□ -1.14
RITA1-202ENST00000549621 FCGBPQ9Y6R7 5405 aaPredicted RBP7.82□□□□□ -1.16
RITA1-202ENST00000549621 MT1EP04732 61 aa7.81□□□□□ -1.16
RITA1-202ENST00000549621 LCE3CQ5T5A8 94 aa7.78□□□□□ -1.16
RITA1-202ENST00000549621 KRTAP9-2Q9BYQ4 174 aa7.78□□□□□ -1.16
RITA1-202ENST00000549621 MT1LQ93083 61 aa7.71□□□□□ -1.18
RITA1-202ENST00000549621 KRTAP19-4Q3LI73 84 aa7.59□□□□□ -1.19
RITA1-202ENST00000549621 KRTAP4-7Q9BYR0 210 aa7.57□□□□□ -1.2
RITA1-202ENST00000549621 CRCT1Q9UGL9 99 aa7.54□□□□□ -1.2
RITA1-202ENST00000549621 KRTAP9-6A8MVA2 160 aa7.45□□□□□ -1.22
RITA1-202ENST00000549621 KRTAP19-3Q7Z4W3 81 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 176.7 ms