RNA–Protein interactions for RNA: ENST00000549525.1

COX6A1-202, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

Gene COX6A1, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-202ENST00000549525 Q96NJ1 140 aa3.69□□□□□ -1.82
COX6A1-202ENST00000549525 PCLOQ9Y6V0 5065 aa3.69□□□□□ -1.82
COX6A1-202ENST00000549525 TRAV22A0A0B4J277 110 aa3.68□□□□□ -1.82
COX6A1-202ENST00000549525 WFDC13Q8IUB5 93 aa3.68□□□□□ -1.82
COX6A1-202ENST00000549525 ZCCHC13Q8WW36 166 aaKnown RBP3.68□□□□□ -1.82
COX6A1-202ENST00000549525 C8orf17Q9NRJ1 99 aa3.68□□□□□ -1.82
COX6A1-202ENST00000549525 SMIM26A0A096LP01 95 aa3.67□□□□□ -1.82
COX6A1-202ENST00000549525 MMP24-AS1A0A0U1RRL7 71 aa3.67□□□□□ -1.82
COX6A1-202ENST00000549525 KRTAP9-6A8MVA2 160 aa3.67□□□□□ -1.82
COX6A1-202ENST00000549525 C1orf195Q5TG92 126 aa3.67□□□□□ -1.82
COX6A1-202ENST00000549525 MRPL34Q9BQ48 92 aaKnown RBP3.67□□□□□ -1.82
COX6A1-202ENST00000549525 ABCA13Q86UQ4 5058 aa3.67□□□□□ -1.82
COX6A1-202ENST00000549525 IGHV6-1A0A0B4J1U7 121 aa3.66□□□□□ -1.82
COX6A1-202ENST00000549525 H0Y9P7 68 aa3.66□□□□□ -1.82
COX6A1-202ENST00000549525 C1orf64Q8NEQ6 169 aa3.66□□□□□ -1.82
COX6A1-202ENST00000549525 LINC00313P59037 77 aa3.65□□□□□ -1.83
COX6A1-202ENST00000549525 TPRXLQ17RH7 258 aa3.65□□□□□ -1.83
COX6A1-202ENST00000549525 LINC00208Q96KT6 92 aa3.65□□□□□ -1.83
COX6A1-202ENST00000549525 RETNLBQ9BQ08 111 aa3.65□□□□□ -1.83
COX6A1-202ENST00000549525 CYP4F30PQ9H0H9 118 aa3.65□□□□□ -1.83
COX6A1-202ENST00000549525 CYSTM1Q9H1C7 97 aa3.65□□□□□ -1.83
COX6A1-202ENST00000549525 SEC61GP60059 68 aa3.64□□□□□ -1.83
COX6A1-202ENST00000549525 LOC101927531A0A1B0GV80 90 aa3.63□□□□□ -1.83
COX6A1-202ENST00000549525 NDUFS5O43920 106 aa3.63□□□□□ -1.83
COX6A1-202ENST00000549525 V9GYY9 64 aa3.63□□□□□ -1.83
COX6A1-202ENST00000549525 KRTAP13-3Q3SY46 172 aa3.59□□□□□ -1.83
COX6A1-202ENST00000549525 C9orf92A6NGG3 77 aa3.57□□□□□ -1.84
COX6A1-202ENST00000549525 KRTAP5-4Q6L8H1 288 aa3.57□□□□□ -1.84
COX6A1-202ENST00000549525 ATP11AUNQ6ZP68 121 aa3.56□□□□□ -1.84
COX6A1-202ENST00000549525 KRTAP4-4Q9BYR3 166 aa3.56□□□□□ -1.84
COX6A1-202ENST00000549525 ACYP2P14621 99 aa3.55□□□□□ -1.84
COX6A1-202ENST00000549525 Q1T7F1 81 aa3.55□□□□□ -1.84
COX6A1-202ENST00000549525 HERC1Q15751 4861 aa3.55□□□□□ -1.84
COX6A1-202ENST00000549525 KRTAP5-9P26371 169 aa3.54□□□□□ -1.84
COX6A1-202ENST00000549525 C20orf166-AS1Q96NR2 134 aa3.53□□□□□ -1.84
COX6A1-202ENST00000549525 A8MUU9 505 aa3.52□□□□□ -1.85
COX6A1-202ENST00000549525 RPL37P61927 97 aaKnown RBP3.52□□□□□ -1.85
COX6A1-202ENST00000549525 A8MUN3 132 aa3.5□□□□□ -1.85
COX6A1-202ENST00000549525 C4orf26Q17RF5 130 aa3.49□□□□□ -1.85
COX6A1-202ENST00000549525 PCOTHQ58A44 107 aa3.49□□□□□ -1.85
COX6A1-202ENST00000549525 Q5W150 140 aa3.49□□□□□ -1.85
COX6A1-202ENST00000549525 COA5Q86WW8 74 aa3.48□□□□□ -1.85
COX6A1-202ENST00000549525 C7orf65Q6ZTY9 151 aa3.47□□□□□ -1.85
COX6A1-202ENST00000549525 DMAC1Q96GE9 116 aa3.47□□□□□ -1.85
COX6A1-202ENST00000549525 HRES1P13985 223 aa3.46□□□□□ -1.86
COX6A1-202ENST00000549525 LCE3EQ5T5B0 92 aa3.46□□□□□ -1.86
COX6A1-202ENST00000549525 SPTSSBQ8NFR3 76 aa3.46□□□□□ -1.86
COX6A1-202ENST00000549525 LPAP08519 4548 aa3.45□□□□□ -1.86
COX6A1-202ENST00000549525 CHKB-CPT1BH3BT56 60 aa3.45□□□□□ -1.86
COX6A1-202ENST00000549525 PRR15LQ9BU68 103 aa3.45□□□□□ -1.86
COX6A1-202ENST00000549525 HMCN2Q8NDA2 5059 aa3.45□□□□□ -1.86
COX6A1-202ENST00000549525 PRO0628Q9UI54 55 aa3.44□□□□□ -1.86
COX6A1-202ENST00000549525 LINC01558Q9Y6Z2 57 aa3.44□□□□□ -1.86
COX6A1-202ENST00000549525 LRP2P98164 4655 aa3.43□□□□□ -1.86
COX6A1-202ENST00000549525 RBM12B-AS1Q9P1G2 102 aa3.4□□□□□ -1.87
COX6A1-202ENST00000549525 SPINK7P58062 85 aa3.39□□□□□ -1.87
COX6A1-202ENST00000549525 PSPHP1O15172 72 aa3.38□□□□□ -1.87
COX6A1-202ENST00000549525 BRK1Q8WUW1 75 aa3.38□□□□□ -1.87
COX6A1-202ENST00000549525 Q5VV11 94 aa3.36□□□□□ -1.87
COX6A1-202ENST00000549525 COX6B2Q6YFQ2 88 aa3.36□□□□□ -1.87
COX6A1-202ENST00000549525 A0A1B0GU69 56 aa3.35□□□□□ -1.87
COX6A1-202ENST00000549525 A6NED7 52 aa3.35□□□□□ -1.87
COX6A1-202ENST00000549525 A8MU10 97 aa3.35□□□□□ -1.87
COX6A1-202ENST00000549525 UBR4Q5T4S7 5183 aa3.34□□□□□ -1.87
COX6A1-202ENST00000549525 MUC17Q685J3 4493 aa3.34□□□□□ -1.88
COX6A1-202ENST00000549525 MUC2Q02817 5179 aa3.34□□□□□ -1.88
COX6A1-202ENST00000549525 CDC42SE1Q9NRR8 79 aa3.33□□□□□ -1.88
COX6A1-202ENST00000549525 UQCR11O14957 56 aa3.32□□□□□ -1.88
COX6A1-202ENST00000549525 KRTAP12-2P59991 146 aa3.32□□□□□ -1.88
COX6A1-202ENST00000549525 KRTAP4-1Q9BYQ7 146 aa3.31□□□□□ -1.88
COX6A1-202ENST00000549525 RNF213Q63HN8 5207 aa3.29□□□□□ -1.88
COX6A1-202ENST00000549525 H1FX-AS1Q4G0G2 97 aa3.27□□□□□ -1.89
COX6A1-202ENST00000549525 SPATA8Q6RVD6 105 aa3.27□□□□□ -1.89
COX6A1-202ENST00000549525 M0R2T5 61 aa3.26□□□□□ -1.89
COX6A1-202ENST00000549525 PMAIP1Q13794 54 aa3.25□□□□□ -1.89
COX6A1-202ENST00000549525 MIR22HGQ0VDD5 57 aa3.24□□□□□ -1.89
COX6A1-202ENST00000549525 LCA10Q71F78 164 aa3.24□□□□□ -1.89
COX6A1-202ENST00000549525 KRTAP19-2Q3LHN2 52 aa3.22□□□□□ -1.89
COX6A1-202ENST00000549525 A0A1B0GU33 70 aa3.21□□□□□ -1.9
COX6A1-202ENST00000549525 S4R3F8 94 aa3.21□□□□□ -1.9
COX6A1-202ENST00000549525 K7ERS5 55 aa3.2□□□□□ -1.9
COX6A1-202ENST00000549525 MT1HP80294 61 aa3.19□□□□□ -1.9
COX6A1-202ENST00000549525 CSAG1Q6PB30 78 aa3.19□□□□□ -1.9
COX6A1-202ENST00000549525 FLGP20930 4061 aaPredicted RBP3.19□□□□□ -1.9
COX6A1-202ENST00000549525 OBSCNQ5VST9 7968 aa3.17□□□□□ -1.9
COX6A1-202ENST00000549525 A6NN06 94 aa3.15□□□□□ -1.91
COX6A1-202ENST00000549525 H0YAA0 97 aa3.15□□□□□ -1.91
COX6A1-202ENST00000549525 KTN1-AS1Q86SY8 53 aa3.15□□□□□ -1.91
COX6A1-202ENST00000549525 FAT4Q6V0I7 4981 aa3.13□□□□□ -1.91
COX6A1-202ENST00000549525 KRTAP4-3Q9BYR4 195 aa3.13□□□□□ -1.91
COX6A1-202ENST00000549525 CAMK2N1Q7Z7J9 78 aa3.12□□□□□ -1.91
COX6A1-202ENST00000549525 M0QZ58 72 aa3.11□□□□□ -1.91
COX6A1-202ENST00000549525 LCE3AQ5TA76 89 aa3.11□□□□□ -1.91
COX6A1-202ENST00000549525 KRTAP10-10P60014 251 aa3.07□□□□□ -1.92
COX6A1-202ENST00000549525 ADM2Q7Z4H4 148 aa3.06□□□□□ -1.92
COX6A1-202ENST00000549525 CRIPTQ9P021 101 aa3.06□□□□□ -1.92
COX6A1-202ENST00000549525 MT2AP02795 61 aa3.02□□□□□ -1.93
COX6A1-202ENST00000549525 KRTAP5-2Q701N4 177 aa3□□□□□ -1.93
COX6A1-202ENST00000549525 P0C880 135 aa2.99□□□□□ -1.93
COX6A1-202ENST00000549525 R4GN34 69 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms