RNA–Protein interactions for RNA: ENST00000549078.5

KRT18-206, Transcript of keratin 18, humanhuman

TSL 5

Gene KRT18, Length 2,088 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-206ENST00000549078 Q1T7F1 81 aa9.69□□□□□ -0.86
KRT18-206ENST00000549078 H1FX-AS1Q4G0G2 97 aa9.66□□□□□ -0.86
KRT18-206ENST00000549078 COA5Q86WW8 74 aa9.63□□□□□ -0.87
KRT18-206ENST00000549078 BRK1Q8WUW1 75 aa9.62□□□□□ -0.87
KRT18-206ENST00000549078 LCE2CQ5TA81 110 aa9.57□□□□□ -0.88
KRT18-206ENST00000549078 CHKB-CPT1BH3BT56 60 aa9.54□□□□□ -0.88
KRT18-206ENST00000549078 PSPHP1O15172 72 aa9.54□□□□□ -0.88
KRT18-206ENST00000549078 S4R3F8 94 aa9.54□□□□□ -0.88
KRT18-206ENST00000549078 LCA10Q71F78 164 aa9.52□□□□□ -0.88
KRT18-206ENST00000549078 FLGP20930 4061 aaPredicted RBP9.5□□□□□ -0.89
KRT18-206ENST00000549078 KRTAP3-3Q9BYR6 98 aa9.5□□□□□ -0.89
KRT18-206ENST00000549078 FAT4Q6V0I7 4981 aa9.48□□□□□ -0.89
KRT18-206ENST00000549078 V9GYY9 64 aa9.46□□□□□ -0.89
KRT18-206ENST00000549078 Q5VV11 94 aa9.46□□□□□ -0.9
KRT18-206ENST00000549078 MT1HP80294 61 aa9.37□□□□□ -0.91
KRT18-206ENST00000549078 SPTSSBQ8NFR3 76 aa9.37□□□□□ -0.91
KRT18-206ENST00000549078 A8MU10 97 aa9.36□□□□□ -0.91
KRT18-206ENST00000549078 CSAG1Q6PB30 78 aa9.35□□□□□ -0.91
KRT18-206ENST00000549078 PRR15LQ9BU68 103 aa9.34□□□□□ -0.91
KRT18-206ENST00000549078 LINC01558Q9Y6Z2 57 aa9.27□□□□□ -0.93
KRT18-206ENST00000549078 M0R2T5 61 aa9.25□□□□□ -0.93
KRT18-206ENST00000549078 A6NED7 52 aa9.16□□□□□ -0.94
KRT18-206ENST00000549078 LCE2AQ5TA79 106 aaPredicted RBP9.14□□□□□ -0.95
KRT18-206ENST00000549078 H0YAA0 97 aa9.11□□□□□ -0.95
KRT18-206ENST00000549078 PMAIP1Q13794 54 aa9.11□□□□□ -0.95
KRT18-206ENST00000549078 KRTAP3-2Q9BYR7 98 aa9.11□□□□□ -0.95
KRT18-206ENST00000549078 ADM2Q7Z4H4 148 aa9.11□□□□□ -0.95
KRT18-206ENST00000549078 CDC42SE1Q9NRR8 79 aa9.11□□□□□ -0.95
KRT18-206ENST00000549078 A0A1B0GU69 56 aa9.1□□□□□ -0.95
KRT18-206ENST00000549078 SEC61GP60059 68 aa9.08□□□□□ -0.96
KRT18-206ENST00000549078 KRTAP10-6P60371 365 aaPredicted RBP9.07□□□□□ -0.96
KRT18-206ENST00000549078 P0C880 135 aa9.04□□□□□ -0.96
KRT18-206ENST00000549078 KRTAP9-8Q9BYQ0 159 aa9.01□□□□□ -0.97
KRT18-206ENST00000549078 LORP23490 312 aaPredicted RBP9.01□□□□□ -0.97
KRT18-206ENST00000549078 A6NN06 94 aa9□□□□□ -0.97
KRT18-206ENST00000549078 MT2AP02795 61 aa8.96□□□□□ -0.98
KRT18-206ENST00000549078 MT1FP04733 61 aa8.91□□□□□ -0.98
KRT18-206ENST00000549078 KTN1-AS1Q86SY8 53 aa8.91□□□□□ -0.98
KRT18-206ENST00000549078 A0A1B0GU33 70 aa8.9□□□□□ -0.99
KRT18-206ENST00000549078 KRTAP10-10P60014 251 aa8.87□□□□□ -0.99
KRT18-206ENST00000549078 KRTAP13-4Q3LI77 160 aa8.81□□□□□ -1
KRT18-206ENST00000549078 SPATA8Q6RVD6 105 aa8.8□□□□□ -1
KRT18-206ENST00000549078 UQCR11O14957 56 aa8.78□□□□□ -1
KRT18-206ENST00000549078 CRIPTQ9P021 101 aa8.78□□□□□ -1
KRT18-206ENST00000549078 R4GN34 69 aa8.78□□□□□ -1
KRT18-206ENST00000549078 M0QZ58 72 aa8.77□□□□□ -1.01
KRT18-206ENST00000549078 MIR22HGQ0VDD5 57 aa8.71□□□□□ -1.02
KRT18-206ENST00000549078 KRTAP9-3Q9BYQ3 159 aa8.69□□□□□ -1.02
KRT18-206ENST00000549078 KRTAP19-1Q8IUB9 90 aa8.69□□□□□ -1.02
KRT18-206ENST00000549078 SPRR2GQ9BYE4 73 aa8.67□□□□□ -1.02
KRT18-206ENST00000549078 LINC01554Q52M75 96 aa8.62□□□□□ -1.03
KRT18-206ENST00000549078 A0A0D9SG42 100 aa8.61□□□□□ -1.03
KRT18-206ENST00000549078 PRAC1Q96KF2 57 aa8.56□□□□□ -1.04
KRT18-206ENST00000549078 LCE2BO14633 110 aa8.49□□□□□ -1.05
KRT18-206ENST00000549078 KRTAP19-8Q3LI54 63 aa8.48□□□□□ -1.05
KRT18-206ENST00000549078 KRTAP12-1P59990 96 aa8.44□□□□□ -1.06
KRT18-206ENST00000549078 KRTAP12-2P59991 146 aa8.42□□□□□ -1.06
KRT18-206ENST00000549078 SPINT4Q6UDR6 99 aa8.41□□□□□ -1.06
KRT18-206ENST00000549078 MT1BP07438 61 aa8.39□□□□□ -1.07
KRT18-206ENST00000549078 LCE2DQ5TA82 110 aaPredicted RBP8.36□□□□□ -1.07
KRT18-206ENST00000549078 PLAC4Q8WY50 150 aa8.33□□□□□ -1.08
KRT18-206ENST00000549078 USH2AO75445 5202 aa8.3□□□□□ -1.08
KRT18-206ENST00000549078 K7ERS5 55 aa8.28□□□□□ -1.08
KRT18-206ENST00000549078 CAMK2N1Q7Z7J9 78 aa8.2□□□□□ -1.1
KRT18-206ENST00000549078 KRTAP9-2Q9BYQ4 174 aa8.14□□□□□ -1.11
KRT18-206ENST00000549078 FSIP2Q5CZC0 6907 aa8.09□□□□□ -1.11
KRT18-206ENST00000549078 KRTAP25-1Q3LHN0 102 aa8.09□□□□□ -1.11
KRT18-206ENST00000549078 MT1XP80297 61 aa8.08□□□□□ -1.12
KRT18-206ENST00000549078 SSPOA2VEC9 5147 aa8.08□□□□□ -1.12
KRT18-206ENST00000549078 KRTAP10-5P60370 271 aa8.06□□□□□ -1.12
KRT18-206ENST00000549078 C10orf95Q9H7T3 257 aa8.01□□□□□ -1.13
KRT18-206ENST00000549078 KRTAP19-6Q3LI70 58 aa7.99□□□□□ -1.13
KRT18-206ENST00000549078 PRO2289Q9P1D8 64 aa7.97□□□□□ -1.13
KRT18-206ENST00000549078 ROMO1P60602 79 aa7.96□□□□□ -1.14
KRT18-206ENST00000549078 CRCT1Q9UGL9 99 aa7.83□□□□□ -1.16
KRT18-206ENST00000549078 TNP1P09430 55 aa7.77□□□□□ -1.17
KRT18-206ENST00000549078 FCGBPQ9Y6R7 5405 aaPredicted RBP7.76□□□□□ -1.17
KRT18-206ENST00000549078 KRTAP10-7P60409 375 aaPredicted RBP7.75□□□□□ -1.17
KRT18-206ENST00000549078 KRTAP10-12P60413 245 aa7.65□□□□□ -1.18
KRT18-206ENST00000549078 KRTAP9-6A0A140TA67 174 aa7.57□□□□□ -1.2
KRT18-206ENST00000549078 KRTAP4-8A0A0G2JLE6 195 aa7.51□□□□□ -1.21
KRT18-206ENST00000549078 KRTAP4-8Q9BYQ9 185 aa7.51□□□□□ -1.21
KRT18-206ENST00000549078 KMT2DO14686 5537 aa7.5□□□□□ -1.21
KRT18-206ENST00000549078 LCE3AQ5TA76 89 aa7.5□□□□□ -1.21
KRT18-206ENST00000549078 KRTAP23-1A1A580 65 aa7.46□□□□□ -1.22
KRT18-206ENST00000549078 H3BS24 57 aa7.45□□□□□ -1.22
KRT18-206ENST00000549078 KRTAP15-1Q3LI76 137 aa7.42□□□□□ -1.22
KRT18-206ENST00000549078 PP632Q6XCG6 107 aa7.4□□□□□ -1.22
KRT18-206ENST00000549078 MACF1Q9UPN3 7388 aaKnown RBP7.38□□□□□ -1.23
KRT18-206ENST00000549078 KRTAP8-1Q8IUC2 63 aa7.33□□□□□ -1.24
KRT18-206ENST00000549078 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.26□□□□□ -1.25
KRT18-206ENST00000549078 KRTAP19-5Q3LI72 72 aa7.26□□□□□ -1.25
KRT18-206ENST00000549078 KRTAP19-7Q3SYF9 63 aa7.21□□□□□ -1.25
KRT18-206ENST00000549078 SYNE2Q8WXH0 6885 aaKnown RBP7.21□□□□□ -1.26
KRT18-206ENST00000549078 KRTAP12-3P60328 96 aa7.2□□□□□ -1.26
KRT18-206ENST00000549078 NDUFAF8A1L188 74 aa7.14□□□□□ -1.27
KRT18-206ENST00000549078 MT1EP04732 61 aa7.08□□□□□ -1.28
KRT18-206ENST00000549078 SPRR2FQ96RM1 72 aa7.08□□□□□ -1.28
KRT18-206ENST00000549078 KRTAP5-9P26371 169 aa7.07□□□□□ -1.28
KRT18-206ENST00000549078 KRTAP6-3Q3LI67 103 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 651 ms