RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 LINC00208Q96KT6 92 aa7.23□□□□□ -1.25
DDX54-205ENST00000548786 KRTAP3-3Q9BYR6 98 aa7.23□□□□□ -1.25
DDX54-205ENST00000548786 OCR1Q9BZK8 76 aa7.2□□□□□ -1.26
DDX54-205ENST00000548786 KLKP1Q107X0 134 aa7.19□□□□□ -1.26
DDX54-205ENST00000548786 KRTAP19-6Q3LI70 58 aa7.19□□□□□ -1.26
DDX54-205ENST00000548786 MP68P56378 58 aa7.17□□□□□ -1.26
DDX54-205ENST00000548786 KRTAP9-7A8MTY7 169 aa7.13□□□□□ -1.27
DDX54-205ENST00000548786 SCGB1A1P11684 91 aa7.13□□□□□ -1.27
DDX54-205ENST00000548786 NDUFC1O43677 76 aa7.1□□□□□ -1.27
DDX54-205ENST00000548786 A8MUN3 132 aa7.07□□□□□ -1.28
DDX54-205ENST00000548786 SPRR2GQ9BYE4 73 aa7.07□□□□□ -1.28
DDX54-205ENST00000548786 MT1BP07438 61 aa7.05□□□□□ -1.28
DDX54-205ENST00000548786 PCP4P48539 62 aa7.05□□□□□ -1.28
DDX54-205ENST00000548786 Q5VV11 94 aa7.05□□□□□ -1.28
DDX54-205ENST00000548786 MACF1Q9UPN3 7388 aaKnown RBP7.03□□□□□ -1.28
DDX54-205ENST00000548786 H3BPC8 53 aa7.02□□□□□ -1.29
DDX54-205ENST00000548786 TRAV7A0A075B6U4 112 aa7.01□□□□□ -1.29
DDX54-205ENST00000548786 KRTAP19-8Q3LI54 63 aa7.01□□□□□ -1.29
DDX54-205ENST00000548786 SYNE2Q8WXH0 6885 aaKnown RBP7.01□□□□□ -1.29
DDX54-205ENST00000548786 SMIM20Q8N5G0 67 aa7□□□□□ -1.29
DDX54-205ENST00000548786 ADM2Q7Z4H4 148 aa6.99□□□□□ -1.29
DDX54-205ENST00000548786 CRIPTQ9P021 101 aa6.96□□□□□ -1.3
DDX54-205ENST00000548786 A6NN06 94 aa6.95□□□□□ -1.3
DDX54-205ENST00000548786 H0YAA0 97 aa6.95□□□□□ -1.3
DDX54-205ENST00000548786 DMAC1Q96GE9 116 aa6.94□□□□□ -1.3
DDX54-205ENST00000548786 SERP2Q8N6R1 65 aa6.93□□□□□ -1.3
DDX54-205ENST00000548786 KRTAP10-5P60370 271 aa6.85□□□□□ -1.31
DDX54-205ENST00000548786 SNURFQ9Y675 71 aa6.85□□□□□ -1.31
DDX54-205ENST00000548786 P0C880 135 aa6.84□□□□□ -1.31
DDX54-205ENST00000548786 C20orf197Q8N268 126 aa6.84□□□□□ -1.31
DDX54-205ENST00000548786 COX7CP15954 63 aa6.83□□□□□ -1.32
DDX54-205ENST00000548786 ANAPC13Q9BS18 74 aa6.8□□□□□ -1.32
DDX54-205ENST00000548786 ACYP2P14621 99 aa6.78□□□□□ -1.32
DDX54-205ENST00000548786 R4GN34 69 aa6.78□□□□□ -1.32
DDX54-205ENST00000548786 KRTAP6-3Q3LI67 103 aa6.77□□□□□ -1.33
DDX54-205ENST00000548786 KRTAP3-2Q9BYR7 98 aa6.76□□□□□ -1.33
DDX54-205ENST00000548786 M0QZ58 72 aa6.75□□□□□ -1.33
DDX54-205ENST00000548786 CHKB-CPT1BH3BT56 60 aa6.72□□□□□ -1.33
DDX54-205ENST00000548786 CYSTM1Q9H1C7 97 aa6.72□□□□□ -1.33
DDX54-205ENST00000548786 LINC01554Q52M75 96 aa6.7□□□□□ -1.34
DDX54-205ENST00000548786 CCDC179H3BU77 68 aa6.69□□□□□ -1.34
DDX54-205ENST00000548786 PLAC4Q8WY50 150 aa6.69□□□□□ -1.34
DDX54-205ENST00000548786 SPTSSBQ8NFR3 76 aa6.68□□□□□ -1.34
DDX54-205ENST00000548786 SPANXA2-OT1Q8N9U9 137 aa6.67□□□□□ -1.34
DDX54-205ENST00000548786 H7BZZ5 65 aa6.65□□□□□ -1.34
DDX54-205ENST00000548786 MT1XP80297 61 aa6.64□□□□□ -1.35
DDX54-205ENST00000548786 PRO2289Q9P1D8 64 aa6.62□□□□□ -1.35
DDX54-205ENST00000548786 MUC12Q9UKN1 5478 aa6.59□□□□□ -1.35
DDX54-205ENST00000548786 NEBP20929 6669 aa6.57□□□□□ -1.36
DDX54-205ENST00000548786 KMT2DO14686 5537 aa6.55□□□□□ -1.36
DDX54-205ENST00000548786 COA5Q86WW8 74 aa6.5□□□□□ -1.37
DDX54-205ENST00000548786 KRTAP5-9P26371 169 aa6.48□□□□□ -1.37
DDX54-205ENST00000548786 MDN1Q9NU22 5596 aa6.46□□□□□ -1.38
DDX54-205ENST00000548786 KRTAP13-4Q3LI77 160 aa6.43□□□□□ -1.38
DDX54-205ENST00000548786 ATP5EP56381 51 aaPredicted RBP6.42□□□□□ -1.38
DDX54-205ENST00000548786 TMEM258P61165 79 aa6.42□□□□□ -1.38
DDX54-205ENST00000548786 SPRR2FQ96RM1 72 aa6.4□□□□□ -1.38
DDX54-205ENST00000548786 KRTAP12-2P59991 146 aa6.39□□□□□ -1.39
DDX54-205ENST00000548786 KRTAP8-1Q8IUC2 63 aa6.39□□□□□ -1.39
DDX54-205ENST00000548786 KRTAP10-7P60409 375 aaPredicted RBP6.36□□□□□ -1.39
DDX54-205ENST00000548786 KRTAP4-8A0A0G2JLE6 195 aa6.35□□□□□ -1.39
DDX54-205ENST00000548786 KRTAP4-8Q9BYQ9 185 aa6.35□□□□□ -1.39
DDX54-205ENST00000548786 SEC61GP60059 68 aa6.33□□□□□ -1.4
DDX54-205ENST00000548786 SERP1Q9Y6X1 66 aa6.32□□□□□ -1.4
DDX54-205ENST00000548786 A0A0D9SG42 100 aa6.29□□□□□ -1.4
DDX54-205ENST00000548786 SPRR2EP22531 72 aa6.29□□□□□ -1.4
DDX54-205ENST00000548786 SPRR2BP35325 72 aa6.29□□□□□ -1.4
DDX54-205ENST00000548786 SPRR2AP35326 72 aa6.29□□□□□ -1.4
DDX54-205ENST00000548786 KRTAP20-1Q3LI63 56 aa6.28□□□□□ -1.4
DDX54-205ENST00000548786 KRTAP10-12P60413 245 aa6.27□□□□□ -1.41
DDX54-205ENST00000548786 SPATA8Q6RVD6 105 aa6.27□□□□□ -1.41
DDX54-205ENST00000548786 CAMK2N1Q7Z7J9 78 aa6.27□□□□□ -1.41
DDX54-205ENST00000548786 A0A1B0GU33 70 aa6.22□□□□□ -1.41
DDX54-205ENST00000548786 LCE1AQ5T7P2 110 aa6.17□□□□□ -1.42
DDX54-205ENST00000548786 SPINT4Q6UDR6 99 aa6.17□□□□□ -1.42
DDX54-205ENST00000548786 A0A1B0GU69 56 aa6.16□□□□□ -1.42
DDX54-205ENST00000548786 KRTAP2-3P0C7H8 128 aa6.1□□□□□ -1.43
DDX54-205ENST00000548786 KRTAP2-4Q9BYR9 128 aa6.1□□□□□ -1.43
DDX54-205ENST00000548786 LINC01558Q9Y6Z2 57 aa6.1□□□□□ -1.43
DDX54-205ENST00000548786 KRTAP12-1P59990 96 aa6.09□□□□□ -1.43
DDX54-205ENST00000548786 SPRR2DP22532 72 aa6.07□□□□□ -1.44
DDX54-205ENST00000548786 A8MU10 97 aa6.06□□□□□ -1.44
DDX54-205ENST00000548786 RPS28P62857 69 aaKnown RBP6.04□□□□□ -1.44
DDX54-205ENST00000548786 SMIM26A0A096LP01 95 aa6.02□□□□□ -1.45
DDX54-205ENST00000548786 PRR15LQ9BU68 103 aa6.02□□□□□ -1.45
DDX54-205ENST00000548786 Q1T7F1 81 aa5.98□□□□□ -1.45
DDX54-205ENST00000548786 V9GYY9 64 aa5.96□□□□□ -1.46
DDX54-205ENST00000548786 KRTAP19-7Q3SYF9 63 aa5.91□□□□□ -1.46
DDX54-205ENST00000548786 PSPHP1O15172 72 aa5.9□□□□□ -1.46
DDX54-205ENST00000548786 KRTAP2-2Q9BYT5 123 aa5.9□□□□□ -1.46
DDX54-205ENST00000548786 KRTAP2-1Q9BYU5 128 aa5.9□□□□□ -1.46
DDX54-205ENST00000548786 LCE3BQ5TA77 95 aa5.89□□□□□ -1.47
DDX54-205ENST00000548786 MT1EP04732 61 aa5.87□□□□□ -1.47
DDX54-205ENST00000548786 UQCR11O14957 56 aa5.85□□□□□ -1.47
DDX54-205ENST00000548786 PRO0628Q9UI54 55 aa5.84□□□□□ -1.47
DDX54-205ENST00000548786 KRTAP19-5Q3LI72 72 aa5.83□□□□□ -1.48
DDX54-205ENST00000548786 C10orf95Q9H7T3 257 aa5.83□□□□□ -1.48
DDX54-205ENST00000548786 KRTAP19-3Q7Z4W3 81 aa5.79□□□□□ -1.48
DDX54-205ENST00000548786 LCE5AQ5TCM9 118 aa5.78□□□□□ -1.48
DDX54-205ENST00000548786 MIR22HGQ0VDD5 57 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms