RNA–Protein interactions for RNA: ENST00000547555.5

LETMD1-210, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 1,658 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-210ENST00000547555 C4orf48Q5BLP8 95 aa9.46□□□□□ -0.89
LETMD1-210ENST00000547555 CSAG1Q6PB30 78 aa9.4□□□□□ -0.9
LETMD1-210ENST00000547555 TNXBP22105 4242 aa9.4□□□□□ -0.91
LETMD1-210ENST00000547555 J3QL48 77 aa9.38□□□□□ -0.91
LETMD1-210ENST00000547555 TYMSOSQ8TAI1 123 aa9.38□□□□□ -0.91
LETMD1-210ENST00000547555 A8MUU9 505 aa9.37□□□□□ -0.91
LETMD1-210ENST00000547555 DMBT1Q9UGM3 2413 aaPredicted RBP9.34□□□□□ -0.91
LETMD1-210ENST00000547555 A0A1B0GU33 70 aa9.28□□□□□ -0.92
LETMD1-210ENST00000547555 LINC00304Q8N9R0 145 aa9.28□□□□□ -0.92
LETMD1-210ENST00000547555 KRTAP25-1Q3LHN0 102 aa9.27□□□□□ -0.93
LETMD1-210ENST00000547555 H0YAA0 97 aa9.26□□□□□ -0.93
LETMD1-210ENST00000547555 C20orf166-AS1Q96NR2 134 aa9.26□□□□□ -0.93
LETMD1-210ENST00000547555 K7ERS5 55 aa9.26□□□□□ -0.93
LETMD1-210ENST00000547555 H1FX-AS1Q4G0G2 97 aa9.24□□□□□ -0.93
LETMD1-210ENST00000547555 H3BS24 57 aa9.11□□□□□ -0.95
LETMD1-210ENST00000547555 HERC1Q15751 4861 aa9.11□□□□□ -0.95
LETMD1-210ENST00000547555 ROMO1P60602 79 aa9.09□□□□□ -0.95
LETMD1-210ENST00000547555 KRTAP3-1Q9BYR8 98 aa9.07□□□□□ -0.96
LETMD1-210ENST00000547555 COX6B2Q6YFQ2 88 aa9.07□□□□□ -0.96
LETMD1-210ENST00000547555 RPL37P61927 97 aaKnown RBP8.93□□□□□ -0.98
LETMD1-210ENST00000547555 HMCN2Q8NDA2 5059 aa8.92□□□□□ -0.98
LETMD1-210ENST00000547555 TPRXLQ17RH7 258 aa8.9□□□□□ -0.98
LETMD1-210ENST00000547555 C9orf92A6NGG3 77 aa8.85□□□□□ -0.99
LETMD1-210ENST00000547555 LPAP08519 4548 aa8.82□□□□□ -1
LETMD1-210ENST00000547555 KRTAP10-6P60371 365 aaPredicted RBP8.78□□□□□ -1
LETMD1-210ENST00000547555 LRP2P98164 4655 aa8.78□□□□□ -1
LETMD1-210ENST00000547555 XP32Q5T750 250 aa8.72□□□□□ -1.01
LETMD1-210ENST00000547555 KRTAP3-3Q9BYR6 98 aa8.71□□□□□ -1.02
LETMD1-210ENST00000547555 KRTAP3-2Q9BYR7 98 aa8.69□□□□□ -1.02
LETMD1-210ENST00000547555 P0C880 135 aa8.65□□□□□ -1.02
LETMD1-210ENST00000547555 S4R3F8 94 aa8.65□□□□□ -1.02
LETMD1-210ENST00000547555 CRIPTQ9P021 101 aa8.63□□□□□ -1.03
LETMD1-210ENST00000547555 KRTAP13-4Q3LI77 160 aa8.59□□□□□ -1.03
LETMD1-210ENST00000547555 SPINT4Q6UDR6 99 aa8.59□□□□□ -1.03
LETMD1-210ENST00000547555 SEC61BP60468 96 aaKnown RBP8.58□□□□□ -1.04
LETMD1-210ENST00000547555 UBR4Q5T4S7 5183 aa8.56□□□□□ -1.04
LETMD1-210ENST00000547555 M0QZ58 72 aa8.54□□□□□ -1.04
LETMD1-210ENST00000547555 MUC17Q685J3 4493 aa8.54□□□□□ -1.04
LETMD1-210ENST00000547555 KRTAP15-1Q3LI76 137 aa8.52□□□□□ -1.05
LETMD1-210ENST00000547555 A0A0D9SG42 100 aa8.49□□□□□ -1.05
LETMD1-210ENST00000547555 KRTAP4-1Q9BYQ7 146 aa8.44□□□□□ -1.06
LETMD1-210ENST00000547555 KRTAP12-1P59990 96 aa8.42□□□□□ -1.06
LETMD1-210ENST00000547555 RNF213Q63HN8 5207 aa8.4□□□□□ -1.06
LETMD1-210ENST00000547555 KRTAP12-2P59991 146 aa8.39□□□□□ -1.07
LETMD1-210ENST00000547555 MUC2Q02817 5179 aa8.32□□□□□ -1.08
LETMD1-210ENST00000547555 C10orf95Q9H7T3 257 aa8.32□□□□□ -1.08
LETMD1-210ENST00000547555 NDUFAF8A1L188 74 aa8.26□□□□□ -1.09
LETMD1-210ENST00000547555 KRTAP19-2Q3LHN2 52 aa8.21□□□□□ -1.09
LETMD1-210ENST00000547555 LCE2CQ5TA81 110 aa8.14□□□□□ -1.11
LETMD1-210ENST00000547555 FAT4Q6V0I7 4981 aa8.09□□□□□ -1.11
LETMD1-210ENST00000547555 PP632Q6XCG6 107 aa8.07□□□□□ -1.12
LETMD1-210ENST00000547555 LCE2AQ5TA79 106 aaPredicted RBP8.04□□□□□ -1.12
LETMD1-210ENST00000547555 R4GN34 69 aa8.03□□□□□ -1.12
LETMD1-210ENST00000547555 MT1HP80294 61 aa8□□□□□ -1.13
LETMD1-210ENST00000547555 PLAC4Q8WY50 150 aa7.99□□□□□ -1.13
LETMD1-210ENST00000547555 FLGP20930 4061 aaPredicted RBP7.95□□□□□ -1.14
LETMD1-210ENST00000547555 KRTAP23-1A1A580 65 aa7.84□□□□□ -1.15
LETMD1-210ENST00000547555 M0R2T5 61 aa7.83□□□□□ -1.16
LETMD1-210ENST00000547555 LUZP6Q538Z0 58 aa7.82□□□□□ -1.16
LETMD1-210ENST00000547555 LORP23490 312 aaPredicted RBP7.76□□□□□ -1.17
LETMD1-210ENST00000547555 A0A0A0MQY5 61 aa7.71□□□□□ -1.18
LETMD1-210ENST00000547555 KRTAP9-2Q9BYQ4 174 aa7.71□□□□□ -1.18
LETMD1-210ENST00000547555 KRTAP9-6A0A140TA67 174 aa7.66□□□□□ -1.18
LETMD1-210ENST00000547555 KRTAP9-8Q9BYQ0 159 aa7.65□□□□□ -1.18
LETMD1-210ENST00000547555 CAMK2N1Q7Z7J9 78 aa7.63□□□□□ -1.19
LETMD1-210ENST00000547555 MT2AP02795 61 aa7.57□□□□□ -1.2
LETMD1-210ENST00000547555 SPRR5A0A1B0GTR4 108 aa7.54□□□□□ -1.2
LETMD1-210ENST00000547555 TNP1P09430 55 aa7.54□□□□□ -1.2
LETMD1-210ENST00000547555 MT1FP04733 61 aa7.52□□□□□ -1.21
LETMD1-210ENST00000547555 KRTAP10-10P60014 251 aa7.46□□□□□ -1.22
LETMD1-210ENST00000547555 LCE2DQ5TA82 110 aaPredicted RBP7.46□□□□□ -1.22
LETMD1-210ENST00000547555 KRTAP9-3Q9BYQ3 159 aa7.39□□□□□ -1.23
LETMD1-210ENST00000547555 LCE2BO14633 110 aa7.25□□□□□ -1.25
LETMD1-210ENST00000547555 KRTAP19-1Q8IUB9 90 aa7.24□□□□□ -1.25
LETMD1-210ENST00000547555 SPRR2GQ9BYE4 73 aa7.22□□□□□ -1.25
LETMD1-210ENST00000547555 CRCT1Q9UGL9 99 aa7.19□□□□□ -1.26
LETMD1-210ENST00000547555 FSIP2Q5CZC0 6907 aa7.18□□□□□ -1.26
LETMD1-210ENST00000547555 KRTAP19-8Q3LI54 63 aa7.1□□□□□ -1.27
LETMD1-210ENST00000547555 USH2AO75445 5202 aa7.08□□□□□ -1.28
LETMD1-210ENST00000547555 INE1O15225 51 aa7.06□□□□□ -1.28
LETMD1-210ENST00000547555 PRO2289Q9P1D8 64 aa7.05□□□□□ -1.28
LETMD1-210ENST00000547555 MT1BP07438 61 aa7.03□□□□□ -1.28
LETMD1-210ENST00000547555 KRTAP8-1Q8IUC2 63 aa6.96□□□□□ -1.3
LETMD1-210ENST00000547555 KRTAP19-6Q3LI70 58 aa6.93□□□□□ -1.3
LETMD1-210ENST00000547555 SSPOA2VEC9 5147 aa6.91□□□□□ -1.3
LETMD1-210ENST00000547555 LCE3AQ5TA76 89 aa6.87□□□□□ -1.31
LETMD1-210ENST00000547555 KRTAP9-7A8MTY7 169 aa6.82□□□□□ -1.32
LETMD1-210ENST00000547555 KRTAP10-5P60370 271 aa6.77□□□□□ -1.32
LETMD1-210ENST00000547555 FCGBPQ9Y6R7 5405 aaPredicted RBP6.74□□□□□ -1.33
LETMD1-210ENST00000547555 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.71□□□□□ -1.33
LETMD1-210ENST00000547555 MT1XP80297 61 aa6.7□□□□□ -1.34
LETMD1-210ENST00000547555 KRTAP12-3P60328 96 aa6.65□□□□□ -1.34
LETMD1-210ENST00000547555 KRTAP10-12P60413 245 aa6.59□□□□□ -1.35
LETMD1-210ENST00000547555 MACF1Q9UPN3 7388 aaKnown RBP6.5□□□□□ -1.37
LETMD1-210ENST00000547555 KRTAP19-4Q3LI73 84 aa6.44□□□□□ -1.38
LETMD1-210ENST00000547555 SYNE2Q8WXH0 6885 aaKnown RBP6.43□□□□□ -1.38
LETMD1-210ENST00000547555 KRTAP10-7P60409 375 aaPredicted RBP6.39□□□□□ -1.39
LETMD1-210ENST00000547555 LCE3CQ5T5A8 94 aa6.3□□□□□ -1.4
LETMD1-210ENST00000547555 KRTAP6-3Q3LI67 103 aa6.28□□□□□ -1.4
LETMD1-210ENST00000547555 KRTAP4-8A0A0G2JLE6 195 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 211.9 ms