RNA–Protein interactions for RNA: ENST00000547360.1

AC063948.1-201, humanhuman

TSL 5 BASIC

Gene AC063948.1, Length 379 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC063948.1-201ENST00000547360 CHD8Q9HCK8 2581 aa1.36□□□□□ -2.19
AC063948.1-201ENST00000547360 UNC79Q9P2D8 2635 aa1.36□□□□□ -2.19
AC063948.1-201ENST00000547360 GCN1Q92616 2671 aaKnown RBP1.35□□□□□ -2.19
AC063948.1-201ENST00000547360 CSMD3Q7Z407 3707 aa1.35□□□□□ -2.19
AC063948.1-201ENST00000547360 VPS13CQ709C8 3753 aa1.35□□□□□ -2.19
AC063948.1-201ENST00000547360 MTORP42345 2549 aa1.35□□□□□ -2.19
AC063948.1-201ENST00000547360 HIVEP1P15822 2718 aa1.35□□□□□ -2.19
AC063948.1-201ENST00000547360 NBEAL2Q6ZNJ1 2754 aa1.34□□□□□ -2.19
AC063948.1-201ENST00000547360 INE1O15225 51 aa1.34□□□□□ -2.19
AC063948.1-201ENST00000547360 UTP20O75691 2785 aaKnown RBP1.34□□□□□ -2.2
AC063948.1-201ENST00000547360 A0A0D9SG42 100 aa1.33□□□□□ -2.2
AC063948.1-201ENST00000547360 SPINK6Q6UWN8 80 aa1.33□□□□□ -2.2
AC063948.1-201ENST00000547360 DEFB124Q8NES8 71 aa1.33□□□□□ -2.2
AC063948.1-201ENST00000547360 DNAH9Q9NYC9 4486 aa1.33□□□□□ -2.2
AC063948.1-201ENST00000547360 CMYA5Q8N3K9 4069 aa1.33□□□□□ -2.2
AC063948.1-201ENST00000547360 DMBT1Q9UGM3 2413 aaPredicted RBP1.32□□□□□ -2.2
AC063948.1-201ENST00000547360 SACSQ9NZJ4 4579 aa1.32□□□□□ -2.2
AC063948.1-201ENST00000547360 CUBNO60494 3623 aa1.32□□□□□ -2.2
AC063948.1-201ENST00000547360 H3BNG1 76 aa1.32□□□□□ -2.2
AC063948.1-201ENST00000547360 HTN3P15516 51 aa1.32□□□□□ -2.2
AC063948.1-201ENST00000547360 DEFB135Q30KP9 77 aa1.32□□□□□ -2.2
AC063948.1-201ENST00000547360 NIPBLQ6KC79 2804 aaeCLIP1.32□□□□□ -2.2
AC063948.1-201ENST00000547360 DNAH7Q8WXX0 4024 aa1.32□□□□□ -2.2
AC063948.1-201ENST00000547360 ANKRD11Q6UB99 2663 aaPredicted RBP1.32□□□□□ -2.2
AC063948.1-201ENST00000547360 TENM4Q6N022 2769 aa1.31□□□□□ -2.2
AC063948.1-201ENST00000547360 COL7A1Q02388 2944 aa1.31□□□□□ -2.2
AC063948.1-201ENST00000547360 PIEZO1Q92508 2521 aa1.3□□□□□ -2.2
AC063948.1-201ENST00000547360 CEP295Q9C0D2 2601 aa1.3□□□□□ -2.2
AC063948.1-201ENST00000547360 DNAH3Q8TD57 4116 aa1.3□□□□□ -2.2
AC063948.1-201ENST00000547360 FBN2P35556 2912 aa1.3□□□□□ -2.2
AC063948.1-201ENST00000547360 APOBP04114 4563 aaKnown RBP1.3□□□□□ -2.2
AC063948.1-201ENST00000547360 EPG5Q9HCE0 2579 aa1.3□□□□□ -2.2
AC063948.1-201ENST00000547360 HELZ2Q9BYK8 2649 aaKnown RBP1.3□□□□□ -2.2
AC063948.1-201ENST00000547360 PKD1L1Q8TDX9 2849 aa1.3□□□□□ -2.2
AC063948.1-201ENST00000547360 CSMD2Q7Z408 3487 aa1.29□□□□□ -2.2
AC063948.1-201ENST00000547360 CENPEQ02224 2701 aa1.29□□□□□ -2.2
AC063948.1-201ENST00000547360 TGP01266 2768 aa1.29□□□□□ -2.2
AC063948.1-201ENST00000547360 SVEP1Q4LDE5 3571 aa1.29□□□□□ -2.2
AC063948.1-201ENST00000547360 MXRA5Q9NR99 2828 aa1.29□□□□□ -2.2
AC063948.1-201ENST00000547360 ZANQ9Y493 2812 aa1.29□□□□□ -2.2
AC063948.1-201ENST00000547360 MYO9AB2RTY4 2548 aa1.29□□□□□ -2.2
AC063948.1-201ENST00000547360 STAB2Q8WWQ8 2551 aa1.29□□□□□ -2.2
AC063948.1-201ENST00000547360 TENM3Q9P273 2699 aa1.29□□□□□ -2.2
AC063948.1-201ENST00000547360 CFAP46Q8IYW2 2715 aa1.29□□□□□ -2.2
AC063948.1-201ENST00000547360 LYSTQ99698 3801 aa1.28□□□□□ -2.2
AC063948.1-201ENST00000547360 NBEAL1Q6ZS30 2694 aa1.28□□□□□ -2.2
AC063948.1-201ENST00000547360 SPART-AS1P0CW21 52 aa1.28□□□□□ -2.2
AC063948.1-201ENST00000547360 APLNQ9ULZ1 77 aa1.28□□□□□ -2.2
AC063948.1-201ENST00000547360 FAT3Q8TDW7 4589 aa1.28□□□□□ -2.21
AC063948.1-201ENST00000547360 USP9YO00507 2555 aaPredicted RBP1.27□□□□□ -2.21
AC063948.1-201ENST00000547360 UBE2DNLQ8IWF7 75 aa1.27□□□□□ -2.21
AC063948.1-201ENST00000547360 LRRK2Q5S007 2527 aa1.27□□□□□ -2.21
AC063948.1-201ENST00000547360 ZNF292O60281 2723 aa1.26□□□□□ -2.21
AC063948.1-201ENST00000547360 ITPR3Q14573 2671 aa1.26□□□□□ -2.21
AC063948.1-201ENST00000547360 HECTD4Q9Y4D8 3996 aa1.25□□□□□ -2.21
AC063948.1-201ENST00000547360 DNAH5Q8TE73 4624 aa1.25□□□□□ -2.21
AC063948.1-201ENST00000547360 PKHD1L1Q86WI1 4243 aa1.24□□□□□ -2.21
AC063948.1-201ENST00000547360 CACNA1AO00555 2505 aa1.24□□□□□ -2.21
AC063948.1-201ENST00000547360 STARD9Q9P2P6 4700 aa1.24□□□□□ -2.21
AC063948.1-201ENST00000547360 TEP1Q99973 2627 aaKnown RBP1.24□□□□□ -2.21
AC063948.1-201ENST00000547360 ACANP16112 2415 aa1.24□□□□□ -2.21
AC063948.1-201ENST00000547360 ITPR2Q14571 2701 aa1.24□□□□□ -2.21
AC063948.1-201ENST00000547360 PLECQ15149 4684 aaKnown RBP1.23□□□□□ -2.21
AC063948.1-201ENST00000547360 LRP1Q07954 4544 aaKnown RBP1.23□□□□□ -2.21
AC063948.1-201ENST00000547360 FLGP20930 4061 aaPredicted RBP1.22□□□□□ -2.21
AC063948.1-201ENST00000547360 TNXBP22105 4242 aa1.22□□□□□ -2.21
AC063948.1-201ENST00000547360 HSPG2P98160 4391 aa1.22□□□□□ -2.21
AC063948.1-201ENST00000547360 NOTCH1P46531 2555 aa1.22□□□□□ -2.21
AC063948.1-201ENST00000547360 PKD1P98161 4303 aa1.22□□□□□ -2.21
AC063948.1-201ENST00000547360 ABCA12Q86UK0 2595 aa1.21□□□□□ -2.22
AC063948.1-201ENST00000547360 KRTAP5-10Q6L8G5 202 aa1.21□□□□□ -2.22
AC063948.1-201ENST00000547360 BDP1A6H8Y1 2624 aa1.21□□□□□ -2.22
AC063948.1-201ENST00000547360 ACACBO00763 2458 aa1.21□□□□□ -2.22
AC063948.1-201ENST00000547360 DYNC1H1Q14204 4646 aaKnown RBP1.2□□□□□ -2.22
AC063948.1-201ENST00000547360 FASNP49327 2511 aaKnown RBP1.2□□□□□ -2.22
AC063948.1-201ENST00000547360 Q5VSD8 79 aa1.2□□□□□ -2.22
AC063948.1-201ENST00000547360 SMR3AQ99954 134 aa1.2□□□□□ -2.22
AC063948.1-201ENST00000547360 ATRQ13535 2644 aa1.2□□□□□ -2.22
AC063948.1-201ENST00000547360 KMT2AQ03164 3969 aa1.19□□□□□ -2.22
AC063948.1-201ENST00000547360 ZNF469Q96JG9 3925 aaPredicted RBP1.19□□□□□ -2.22
AC063948.1-201ENST00000547360 FAT2Q9NYQ8 4349 aa1.18□□□□□ -2.22
AC063948.1-201ENST00000547360 M0QZ58 72 aa1.18□□□□□ -2.22
AC063948.1-201ENST00000547360 NSD1Q96L73 2696 aaPredicted RBP1.17□□□□□ -2.22
AC063948.1-201ENST00000547360 FLNAP21333 2647 aaKnown RBP1.17□□□□□ -2.22
AC063948.1-201ENST00000547360 PKHD1P08F94 4074 aa1.17□□□□□ -2.22
AC063948.1-201ENST00000547360 USP24Q9UPU5 2620 aa1.17□□□□□ -2.22
AC063948.1-201ENST00000547360 AHNAK2Q8IVF2 5795 aa1.16□□□□□ -2.22
AC063948.1-201ENST00000547360 VPS13BQ7Z7G8 4022 aa1.16□□□□□ -2.22
AC063948.1-201ENST00000547360 HERC1Q15751 4861 aa1.16□□□□□ -2.22
AC063948.1-201ENST00000547360 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
AC063948.1-201ENST00000547360 KRTAP21-3Q3LHN1 58 aa1.15□□□□□ -2.23
AC063948.1-201ENST00000547360 POLQO75417 2590 aa1.14□□□□□ -2.23
AC063948.1-201ENST00000547360 LRP1BQ9NZR2 4599 aa1.14□□□□□ -2.23
AC063948.1-201ENST00000547360 MGAM2Q2M2H8 2515 aa1.14□□□□□ -2.23
AC063948.1-201ENST00000547360 IGSF10Q6WRI0 2623 aa1.13□□□□□ -2.23
AC063948.1-201ENST00000547360 FLNCQ14315 2725 aa1.12□□□□□ -2.23
AC063948.1-201ENST00000547360 C9orf92A6NGG3 77 aa1.12□□□□□ -2.23
AC063948.1-201ENST00000547360 RPS29P62273 56 aaKnown RBP1.12□□□□□ -2.23
AC063948.1-201ENST00000547360 MYO18BQ8IUG5 2567 aa1.12□□□□□ -2.23
AC063948.1-201ENST00000547360 STAB1Q9NY15 2570 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms