RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 SPINT4Q6UDR6 99 aa5.72□□□□□ -1.49
NPAS3-205ENST00000547068 VPS13BQ7Z7G8 4022 aa5.69□□□□□ -1.5
NPAS3-205ENST00000547068 C9orf92A6NGG3 77 aa5.68□□□□□ -1.5
NPAS3-205ENST00000547068 KRTAP10-4P60372 401 aaPredicted RBP5.68□□□□□ -1.5
NPAS3-205ENST00000547068 BIRC6Q9NR09 4857 aa5.67□□□□□ -1.5
NPAS3-205ENST00000547068 RPL37P61927 97 aaKnown RBP5.67□□□□□ -1.5
NPAS3-205ENST00000547068 HSPG2P98160 4391 aa5.67□□□□□ -1.5
NPAS3-205ENST00000547068 C20orf166-AS1Q96NR2 134 aa5.67□□□□□ -1.5
NPAS3-205ENST00000547068 TPRXLQ17RH7 258 aa5.66□□□□□ -1.5
NPAS3-205ENST00000547068 RYR1P21817 5038 aa5.65□□□□□ -1.51
NPAS3-205ENST00000547068 FAT1Q14517 4588 aa5.64□□□□□ -1.51
NPAS3-205ENST00000547068 RPS29P62273 56 aaKnown RBP5.64□□□□□ -1.51
NPAS3-205ENST00000547068 KRTAP17-1Q9BYP8 105 aa5.63□□□□□ -1.51
NPAS3-205ENST00000547068 A0A0D9SG42 100 aa5.62□□□□□ -1.51
NPAS3-205ENST00000547068 NDUFAF8A1L188 74 aa5.6□□□□□ -1.51
NPAS3-205ENST00000547068 C10orf95Q9H7T3 257 aa5.59□□□□□ -1.51
NPAS3-205ENST00000547068 KRTAP15-1Q3LI76 137 aa5.58□□□□□ -1.52
NPAS3-205ENST00000547068 KRTAP13-4Q3LI77 160 aa5.58□□□□□ -1.52
NPAS3-205ENST00000547068 KRTAP10-6P60371 365 aaPredicted RBP5.57□□□□□ -1.52
NPAS3-205ENST00000547068 KRTAP4-5Q9BYR2 181 aa5.57□□□□□ -1.52
NPAS3-205ENST00000547068 ABCA13Q86UQ4 5058 aa5.54□□□□□ -1.52
NPAS3-205ENST00000547068 HERC2O95714 4834 aa5.54□□□□□ -1.52
NPAS3-205ENST00000547068 DMBT1Q9UGM3 2413 aaPredicted RBP5.54□□□□□ -1.52
NPAS3-205ENST00000547068 PCLOQ9Y6V0 5065 aa5.52□□□□□ -1.53
NPAS3-205ENST00000547068 PKHD1L1Q86WI1 4243 aa5.51□□□□□ -1.53
NPAS3-205ENST00000547068 KRTAP10-8P60410 259 aa5.49□□□□□ -1.53
NPAS3-205ENST00000547068 S4R3F8 94 aa5.48□□□□□ -1.53
NPAS3-205ENST00000547068 MYCBP2O75592 4640 aa5.47□□□□□ -1.53
NPAS3-205ENST00000547068 J3QL48 77 aa5.45□□□□□ -1.54
NPAS3-205ENST00000547068 KRTAP12-2P59991 146 aa5.44□□□□□ -1.54
NPAS3-205ENST00000547068 LRP1Q07954 4544 aaKnown RBP5.44□□□□□ -1.54
NPAS3-205ENST00000547068 MT1HL1P0DM35 61 aa5.43□□□□□ -1.54
NPAS3-205ENST00000547068 FAT3Q8TDW7 4589 aa5.41□□□□□ -1.54
NPAS3-205ENST00000547068 TNXBP22105 4242 aa5.38□□□□□ -1.55
NPAS3-205ENST00000547068 KRTAP12-1P59990 96 aa5.37□□□□□ -1.55
NPAS3-205ENST00000547068 XP32Q5T750 250 aa5.36□□□□□ -1.55
NPAS3-205ENST00000547068 HERC1Q15751 4861 aa5.3□□□□□ -1.56
NPAS3-205ENST00000547068 A0A0A0MQY5 61 aa5.28□□□□□ -1.56
NPAS3-205ENST00000547068 M0QZ58 72 aa5.25□□□□□ -1.57
NPAS3-205ENST00000547068 LUZP6Q538Z0 58 aa5.2□□□□□ -1.58
NPAS3-205ENST00000547068 PLAC4Q8WY50 150 aa5.19□□□□□ -1.58
NPAS3-205ENST00000547068 HMCN2Q8NDA2 5059 aa5.09□□□□□ -1.59
NPAS3-205ENST00000547068 LPAP08519 4548 aa5.09□□□□□ -1.6
NPAS3-205ENST00000547068 R4GN34 69 aa5.07□□□□□ -1.6
NPAS3-205ENST00000547068 LRP2P98164 4655 aa5.04□□□□□ -1.6
NPAS3-205ENST00000547068 SEC61BP60468 96 aaKnown RBP5.04□□□□□ -1.6
NPAS3-205ENST00000547068 UBR4Q5T4S7 5183 aa5.03□□□□□ -1.6
NPAS3-205ENST00000547068 RNF213Q63HN8 5207 aa4.96□□□□□ -1.61
NPAS3-205ENST00000547068 PP632Q6XCG6 107 aa4.96□□□□□ -1.62
NPAS3-205ENST00000547068 LCE2BO14633 110 aa4.95□□□□□ -1.62
NPAS3-205ENST00000547068 MUC2Q02817 5179 aa4.93□□□□□ -1.62
NPAS3-205ENST00000547068 LORP23490 312 aaPredicted RBP4.92□□□□□ -1.62
NPAS3-205ENST00000547068 MUC17Q685J3 4493 aa4.88□□□□□ -1.63
NPAS3-205ENST00000547068 CAMK2N1Q7Z7J9 78 aa4.86□□□□□ -1.63
NPAS3-205ENST00000547068 KRTAP4-1Q9BYQ7 146 aa4.86□□□□□ -1.63
NPAS3-205ENST00000547068 LCE2AQ5TA79 106 aaPredicted RBP4.74□□□□□ -1.65
NPAS3-205ENST00000547068 SPRR5A0A1B0GTR4 108 aa4.73□□□□□ -1.65
NPAS3-205ENST00000547068 LOC100996750A0A140TA64 210 aa4.72□□□□□ -1.65
NPAS3-205ENST00000547068 KRTAP4-6Q9BYQ5 205 aa4.72□□□□□ -1.65
NPAS3-205ENST00000547068 FAT4Q6V0I7 4981 aa4.71□□□□□ -1.66
NPAS3-205ENST00000547068 TNP1P09430 55 aa4.71□□□□□ -1.66
NPAS3-205ENST00000547068 KRTAP19-2Q3LHN2 52 aa4.68□□□□□ -1.66
NPAS3-205ENST00000547068 KRTAP23-1A1A580 65 aa4.68□□□□□ -1.66
NPAS3-205ENST00000547068 LCE2CQ5TA81 110 aa4.65□□□□□ -1.66
NPAS3-205ENST00000547068 M0R2T5 61 aa4.62□□□□□ -1.67
NPAS3-205ENST00000547068 MT1HP80294 61 aa4.6□□□□□ -1.67
NPAS3-205ENST00000547068 PRO2289Q9P1D8 64 aa4.58□□□□□ -1.68
NPAS3-205ENST00000547068 FLGP20930 4061 aaPredicted RBP4.57□□□□□ -1.68
NPAS3-205ENST00000547068 INE1O15225 51 aa4.47□□□□□ -1.69
NPAS3-205ENST00000547068 LCE3AQ5TA76 89 aa4.41□□□□□ -1.7
NPAS3-205ENST00000547068 KRTAP9-8Q9BYQ0 159 aa4.39□□□□□ -1.71
NPAS3-205ENST00000547068 KRTAP10-10P60014 251 aa4.38□□□□□ -1.71
NPAS3-205ENST00000547068 MT2AP02795 61 aa4.36□□□□□ -1.71
NPAS3-205ENST00000547068 MT1FP04733 61 aa4.33□□□□□ -1.72
NPAS3-205ENST00000547068 KRTAP9-6A0A140TA67 174 aa4.33□□□□□ -1.72
NPAS3-205ENST00000547068 SPRR2GQ9BYE4 73 aa4.32□□□□□ -1.72
NPAS3-205ENST00000547068 KRTAP19-1Q8IUB9 90 aa4.28□□□□□ -1.72
NPAS3-205ENST00000547068 KRTAP8-1Q8IUC2 63 aa4.28□□□□□ -1.72
NPAS3-205ENST00000547068 KRTAP9-3Q9BYQ3 159 aa4.25□□□□□ -1.73
NPAS3-205ENST00000547068 FSIP2Q5CZC0 6907 aa4.21□□□□□ -1.74
NPAS3-205ENST00000547068 KRTAP9-2Q9BYQ4 174 aa4.19□□□□□ -1.74
NPAS3-205ENST00000547068 KRTAP12-3P60328 96 aa4.18□□□□□ -1.74
NPAS3-205ENST00000547068 USH2AO75445 5202 aa4.17□□□□□ -1.74
NPAS3-205ENST00000547068 KRTAP10-12P60413 245 aa4.15□□□□□ -1.74
NPAS3-205ENST00000547068 KRTAP19-8Q3LI54 63 aa4.12□□□□□ -1.75
NPAS3-205ENST00000547068 KRTAP10-5P60370 271 aa4.09□□□□□ -1.76
NPAS3-205ENST00000547068 MT1XP80297 61 aa4.06□□□□□ -1.76
NPAS3-205ENST00000547068 MT1BP07438 61 aa4.06□□□□□ -1.76
NPAS3-205ENST00000547068 KRTAP4-8Q9BYQ9 185 aa4.04□□□□□ -1.76
NPAS3-205ENST00000547068 SSPOA2VEC9 5147 aa4.04□□□□□ -1.76
NPAS3-205ENST00000547068 KRTAP10-7P60409 375 aaPredicted RBP4□□□□□ -1.77
NPAS3-205ENST00000547068 LCE3CQ5T5A8 94 aa3.95□□□□□ -1.78
NPAS3-205ENST00000547068 CRCT1Q9UGL9 99 aa3.95□□□□□ -1.78
NPAS3-205ENST00000547068 KRTAP19-6Q3LI70 58 aa3.95□□□□□ -1.78
NPAS3-205ENST00000547068 KRTAP5-3Q6L8H2 238 aa3.93□□□□□ -1.78
NPAS3-205ENST00000547068 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.92□□□□□ -1.78
NPAS3-205ENST00000547068 KRTAP19-5Q3LI72 72 aa3.89□□□□□ -1.79
NPAS3-205ENST00000547068 FCGBPQ9Y6R7 5405 aaPredicted RBP3.87□□□□□ -1.79
NPAS3-205ENST00000547068 KRTAP4-12Q9BQ66 201 aa3.86□□□□□ -1.79
NPAS3-205ENST00000547068 KRTAP9-6A8MVA2 160 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms