RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 KRTAP9-3Q9BYQ3 159 aa9.74□□□□□ -0.85
SCARB1-211ENST00000546215 DMAC1Q96GE9 116 aa9.73□□□□□ -0.85
SCARB1-211ENST00000546215 C20orf197Q8N268 126 aa9.72□□□□□ -0.85
SCARB1-211ENST00000546215 NDUFC1O43677 76 aa9.68□□□□□ -0.86
SCARB1-211ENST00000546215 FSIP2Q5CZC0 6907 aa9.66□□□□□ -0.86
SCARB1-211ENST00000546215 COX7CP15954 63 aa9.65□□□□□ -0.86
SCARB1-211ENST00000546215 USH2AO75445 5202 aa9.61□□□□□ -0.87
SCARB1-211ENST00000546215 LCE2BO14633 110 aa9.59□□□□□ -0.87
SCARB1-211ENST00000546215 PCP4P48539 62 aa9.59□□□□□ -0.87
SCARB1-211ENST00000546215 ACYP2P14621 99 aa9.58□□□□□ -0.88
SCARB1-211ENST00000546215 SPANXA2-OT1Q8N9U9 137 aa9.57□□□□□ -0.88
SCARB1-211ENST00000546215 ANAPC13Q9BS18 74 aa9.52□□□□□ -0.89
SCARB1-211ENST00000546215 CRCT1Q9UGL9 99 aa9.52□□□□□ -0.89
SCARB1-211ENST00000546215 H0YAA0 97 aa9.5□□□□□ -0.89
SCARB1-211ENST00000546215 KRTAP9-6A0A140TA67 174 aa9.5□□□□□ -0.89
SCARB1-211ENST00000546215 CYSTM1Q9H1C7 97 aa9.46□□□□□ -0.89
SCARB1-211ENST00000546215 KRTAP19-1Q8IUB9 90 aa9.43□□□□□ -0.9
SCARB1-211ENST00000546215 H7BZZ5 65 aa9.42□□□□□ -0.9
SCARB1-211ENST00000546215 SSPOA2VEC9 5147 aa9.42□□□□□ -0.9
SCARB1-211ENST00000546215 ADM2Q7Z4H4 148 aa9.41□□□□□ -0.9
SCARB1-211ENST00000546215 CHKB-CPT1BH3BT56 60 aa9.37□□□□□ -0.91
SCARB1-211ENST00000546215 SPRR2GQ9BYE4 73 aa9.37□□□□□ -0.91
SCARB1-211ENST00000546215 CRIPTQ9P021 101 aa9.35□□□□□ -0.91
SCARB1-211ENST00000546215 CCDC179H3BU77 68 aa9.34□□□□□ -0.91
SCARB1-211ENST00000546215 SPTSSBQ8NFR3 76 aa9.34□□□□□ -0.91
SCARB1-211ENST00000546215 P0C880 135 aa9.28□□□□□ -0.92
SCARB1-211ENST00000546215 KRTAP3-2Q9BYR7 98 aa9.28□□□□□ -0.92
SCARB1-211ENST00000546215 COA5Q86WW8 74 aa9.26□□□□□ -0.93
SCARB1-211ENST00000546215 KRTAP19-8Q3LI54 63 aa9.24□□□□□ -0.93
SCARB1-211ENST00000546215 MT1BP07438 61 aa9.19□□□□□ -0.94
SCARB1-211ENST00000546215 Q5VV11 94 aa9.18□□□□□ -0.94
SCARB1-211ENST00000546215 KRTAP19-6Q3LI70 58 aa9.16□□□□□ -0.94
SCARB1-211ENST00000546215 FCGBPQ9Y6R7 5405 aaPredicted RBP9.15□□□□□ -0.94
SCARB1-211ENST00000546215 R4GN34 69 aa9.12□□□□□ -0.95
SCARB1-211ENST00000546215 M0QZ58 72 aa9.07□□□□□ -0.96
SCARB1-211ENST00000546215 ATP5EP56381 51 aaPredicted RBP9.06□□□□□ -0.96
SCARB1-211ENST00000546215 TMEM258P61165 79 aa8.99□□□□□ -0.97
SCARB1-211ENST00000546215 SEC61GP60059 68 aa8.91□□□□□ -0.98
SCARB1-211ENST00000546215 LINC01554Q52M75 96 aa8.91□□□□□ -0.98
SCARB1-211ENST00000546215 SERP1Q9Y6X1 66 aa8.9□□□□□ -0.99
SCARB1-211ENST00000546215 A6NN06 94 aa8.89□□□□□ -0.99
SCARB1-211ENST00000546215 KRTAP10-5P60370 271 aa8.87□□□□□ -0.99
SCARB1-211ENST00000546215 PLAC4Q8WY50 150 aa8.86□□□□□ -0.99
SCARB1-211ENST00000546215 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.85□□□□□ -0.99
SCARB1-211ENST00000546215 KRTAP13-4Q3LI77 160 aa8.85□□□□□ -0.99
SCARB1-211ENST00000546215 A0A1B0GU69 56 aa8.77□□□□□ -1.01
SCARB1-211ENST00000546215 A0A1B0GU33 70 aa8.75□□□□□ -1.01
SCARB1-211ENST00000546215 MACF1Q9UPN3 7388 aaKnown RBP8.73□□□□□ -1.01
SCARB1-211ENST00000546215 MT1XP80297 61 aa8.73□□□□□ -1.01
SCARB1-211ENST00000546215 SPATA8Q6RVD6 105 aa8.68□□□□□ -1.02
SCARB1-211ENST00000546215 PRO2289Q9P1D8 64 aa8.68□□□□□ -1.02
SCARB1-211ENST00000546215 LINC01558Q9Y6Z2 57 aa8.68□□□□□ -1.02
SCARB1-211ENST00000546215 RPS28P62857 69 aaKnown RBP8.63□□□□□ -1.03
SCARB1-211ENST00000546215 PRR15LQ9BU68 103 aa8.61□□□□□ -1.03
SCARB1-211ENST00000546215 KRTAP9-7A8MTY7 169 aa8.6□□□□□ -1.03
SCARB1-211ENST00000546215 A0A0D9SG42 100 aa8.59□□□□□ -1.03
SCARB1-211ENST00000546215 SYNE2Q8WXH0 6885 aaKnown RBP8.56□□□□□ -1.04
SCARB1-211ENST00000546215 SMIM26A0A096LP01 95 aa8.48□□□□□ -1.05
SCARB1-211ENST00000546215 KRTAP12-1P59990 96 aa8.46□□□□□ -1.06
SCARB1-211ENST00000546215 A8MU10 97 aa8.44□□□□□ -1.06
SCARB1-211ENST00000546215 SPINT4Q6UDR6 99 aa8.44□□□□□ -1.06
SCARB1-211ENST00000546215 CAMK2N1Q7Z7J9 78 aa8.44□□□□□ -1.06
SCARB1-211ENST00000546215 KRTAP12-2P59991 146 aa8.42□□□□□ -1.06
SCARB1-211ENST00000546215 Q1T7F1 81 aa8.41□□□□□ -1.06
SCARB1-211ENST00000546215 KRTAP6-3Q3LI67 103 aa8.41□□□□□ -1.06
SCARB1-211ENST00000546215 V9GYY9 64 aa8.41□□□□□ -1.06
SCARB1-211ENST00000546215 KMT2DO14686 5537 aa8.4□□□□□ -1.06
SCARB1-211ENST00000546215 UQCR11O14957 56 aa8.37□□□□□ -1.07
SCARB1-211ENST00000546215 KRTAP10-7P60409 375 aaPredicted RBP8.34□□□□□ -1.07
SCARB1-211ENST00000546215 PSPHP1O15172 72 aa8.31□□□□□ -1.08
SCARB1-211ENST00000546215 KRTAP10-12P60413 245 aa8.28□□□□□ -1.08
SCARB1-211ENST00000546215 KRTAP5-9P26371 169 aa8.22□□□□□ -1.09
SCARB1-211ENST00000546215 KRTAP4-8A0A0G2JLE6 195 aa8.22□□□□□ -1.09
SCARB1-211ENST00000546215 MIR22HGQ0VDD5 57 aa8.22□□□□□ -1.09
SCARB1-211ENST00000546215 KRTAP4-8Q9BYQ9 185 aa8.22□□□□□ -1.09
SCARB1-211ENST00000546215 MUC12Q9UKN1 5478 aa8.19□□□□□ -1.1
SCARB1-211ENST00000546215 KRTAP8-1Q8IUC2 63 aa8.18□□□□□ -1.1
SCARB1-211ENST00000546215 SPRR2FQ96RM1 72 aa8.06□□□□□ -1.12
SCARB1-211ENST00000546215 MDN1Q9NU22 5596 aa8.06□□□□□ -1.12
SCARB1-211ENST00000546215 C10orf95Q9H7T3 257 aa8.05□□□□□ -1.12
SCARB1-211ENST00000546215 A6NED7 52 aa8.04□□□□□ -1.12
SCARB1-211ENST00000546215 NEBP20929 6669 aa7.97□□□□□ -1.13
SCARB1-211ENST00000546215 K7ERS5 55 aa7.94□□□□□ -1.14
SCARB1-211ENST00000546215 TNP1P09430 55 aa7.91□□□□□ -1.14
SCARB1-211ENST00000546215 SPRR2EP22531 72 aa7.84□□□□□ -1.15
SCARB1-211ENST00000546215 SPRR2BP35325 72 aa7.84□□□□□ -1.15
SCARB1-211ENST00000546215 SPRR2AP35326 72 aa7.84□□□□□ -1.15
SCARB1-211ENST00000546215 LCE1AQ5T7P2 110 aa7.81□□□□□ -1.16
SCARB1-211ENST00000546215 KRTAP19-7Q3SYF9 63 aa7.8□□□□□ -1.16
SCARB1-211ENST00000546215 CDC42SE1Q9NRR8 79 aa7.8□□□□□ -1.16
SCARB1-211ENST00000546215 BRK1Q8WUW1 75 aa7.76□□□□□ -1.17
SCARB1-211ENST00000546215 PRO0628Q9UI54 55 aa7.75□□□□□ -1.17
SCARB1-211ENST00000546215 LCE3AQ5TA76 89 aa7.74□□□□□ -1.17
SCARB1-211ENST00000546215 MT1EP04732 61 aa7.7□□□□□ -1.18
SCARB1-211ENST00000546215 KRTAP19-5Q3LI72 72 aa7.7□□□□□ -1.18
SCARB1-211ENST00000546215 KRTAP25-1Q3LHN0 102 aa7.68□□□□□ -1.18
SCARB1-211ENST00000546215 SVIPQ8NHG7 77 aa7.63□□□□□ -1.19
SCARB1-211ENST00000546215 SPRR2DP22532 72 aa7.56□□□□□ -1.2
SCARB1-211ENST00000546215 KRTAP20-1Q3LI63 56 aa7.56□□□□□ -1.2
SCARB1-211ENST00000546215 KRTAP19-3Q7Z4W3 81 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms