RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 RPS29P62273 56 aaKnown RBP6.28□□□□□ -1.4
DDB1-224ENST00000545894 TNXBP22105 4242 aa6.27□□□□□ -1.41
DDB1-224ENST00000545894 LINC00304Q8N9R0 145 aa6.27□□□□□ -1.41
DDB1-224ENST00000545894 LINC01554Q52M75 96 aa6.25□□□□□ -1.41
DDB1-224ENST00000545894 FLG2Q5D862 2391 aaPredicted RBP6.25□□□□□ -1.41
DDB1-224ENST00000545894 MT1HL1P0DM35 61 aa6.24□□□□□ -1.41
DDB1-224ENST00000545894 KRTAP10-8P60410 259 aa6.24□□□□□ -1.41
DDB1-224ENST00000545894 CSAG1Q6PB30 78 aa6.2□□□□□ -1.42
DDB1-224ENST00000545894 A8MUU9 505 aa6.19□□□□□ -1.42
DDB1-224ENST00000545894 C20orf166-AS1Q96NR2 134 aa6.19□□□□□ -1.42
DDB1-224ENST00000545894 J3QL48 77 aa6.19□□□□□ -1.42
DDB1-224ENST00000545894 C9orf92A6NGG3 77 aa6.18□□□□□ -1.42
DDB1-224ENST00000545894 H0YAA0 97 aa6.18□□□□□ -1.42
DDB1-224ENST00000545894 KRTAP3-1Q9BYR8 98 aa6.16□□□□□ -1.42
DDB1-224ENST00000545894 A0A1B0GU33 70 aa6.14□□□□□ -1.43
DDB1-224ENST00000545894 H1FX-AS1Q4G0G2 97 aa6.11□□□□□ -1.43
DDB1-224ENST00000545894 HERC1Q15751 4861 aa6.08□□□□□ -1.44
DDB1-224ENST00000545894 COX6B2Q6YFQ2 88 aa6.05□□□□□ -1.44
DDB1-224ENST00000545894 DMBT1Q9UGM3 2413 aaPredicted RBP6.04□□□□□ -1.44
DDB1-224ENST00000545894 KRTAP25-1Q3LHN0 102 aa6.02□□□□□ -1.44
DDB1-224ENST00000545894 K7ERS5 55 aa6□□□□□ -1.45
DDB1-224ENST00000545894 HMCN2Q8NDA2 5059 aa5.96□□□□□ -1.46
DDB1-224ENST00000545894 LPAP08519 4548 aa5.9□□□□□ -1.46
DDB1-224ENST00000545894 KRTAP10-6P60371 365 aaPredicted RBP5.89□□□□□ -1.47
DDB1-224ENST00000545894 ROMO1P60602 79 aa5.87□□□□□ -1.47
DDB1-224ENST00000545894 RPL37P61927 97 aaKnown RBP5.87□□□□□ -1.47
DDB1-224ENST00000545894 CRIPTQ9P021 101 aa5.87□□□□□ -1.47
DDB1-224ENST00000545894 H3BS24 57 aa5.85□□□□□ -1.47
DDB1-224ENST00000545894 TPRXLQ17RH7 258 aa5.85□□□□□ -1.47
DDB1-224ENST00000545894 KRTAP13-4Q3LI77 160 aa5.84□□□□□ -1.47
DDB1-224ENST00000545894 S4R3F8 94 aa5.83□□□□□ -1.48
DDB1-224ENST00000545894 LRP2P98164 4655 aa5.82□□□□□ -1.48
DDB1-224ENST00000545894 A0A0D9SG42 100 aa5.82□□□□□ -1.48
DDB1-224ENST00000545894 XP32Q5T750 250 aa5.79□□□□□ -1.48
DDB1-224ENST00000545894 P0C880 135 aa5.75□□□□□ -1.49
DDB1-224ENST00000545894 MUC17Q685J3 4493 aa5.74□□□□□ -1.49
DDB1-224ENST00000545894 UBR4Q5T4S7 5183 aa5.7□□□□□ -1.5
DDB1-224ENST00000545894 KRTAP12-2P59991 146 aa5.67□□□□□ -1.5
DDB1-224ENST00000545894 C10orf95Q9H7T3 257 aa5.65□□□□□ -1.51
DDB1-224ENST00000545894 SEC61BP60468 96 aaKnown RBP5.64□□□□□ -1.51
DDB1-224ENST00000545894 SPINT4Q6UDR6 99 aa5.64□□□□□ -1.51
DDB1-224ENST00000545894 KRTAP12-1P59990 96 aa5.63□□□□□ -1.51
DDB1-224ENST00000545894 RNF213Q63HN8 5207 aa5.62□□□□□ -1.51
DDB1-224ENST00000545894 KRTAP4-1Q9BYQ7 146 aa5.6□□□□□ -1.51
DDB1-224ENST00000545894 M0QZ58 72 aa5.59□□□□□ -1.51
DDB1-224ENST00000545894 MUC2Q02817 5179 aa5.58□□□□□ -1.52
DDB1-224ENST00000545894 LCE2BO14633 110 aa5.56□□□□□ -1.52
DDB1-224ENST00000545894 KRTAP15-1Q3LI76 137 aa5.52□□□□□ -1.53
DDB1-224ENST00000545894 NDUFAF8A1L188 74 aa5.43□□□□□ -1.54
DDB1-224ENST00000545894 KRTAP19-2Q3LHN2 52 aa5.41□□□□□ -1.54
DDB1-224ENST00000545894 R4GN34 69 aa5.41□□□□□ -1.54
DDB1-224ENST00000545894 FAT4Q6V0I7 4981 aa5.39□□□□□ -1.55
DDB1-224ENST00000545894 LCE2CQ5TA81 110 aa5.37□□□□□ -1.55
DDB1-224ENST00000545894 LORP23490 312 aaPredicted RBP5.3□□□□□ -1.56
DDB1-224ENST00000545894 FLGP20930 4061 aaPredicted RBP5.3□□□□□ -1.56
DDB1-224ENST00000545894 MT1HP80294 61 aa5.27□□□□□ -1.57
DDB1-224ENST00000545894 LCE2AQ5TA79 106 aaPredicted RBP5.26□□□□□ -1.57
DDB1-224ENST00000545894 PLAC4Q8WY50 150 aa5.23□□□□□ -1.57
DDB1-224ENST00000545894 M0R2T5 61 aa5.18□□□□□ -1.58
DDB1-224ENST00000545894 PP632Q6XCG6 107 aa5.17□□□□□ -1.58
DDB1-224ENST00000545894 CAMK2N1Q7Z7J9 78 aa5.16□□□□□ -1.58
DDB1-224ENST00000545894 A0A0A0MQY5 61 aa5.1□□□□□ -1.59
DDB1-224ENST00000545894 KRTAP9-8Q9BYQ0 159 aa5.05□□□□□ -1.6
DDB1-224ENST00000545894 LUZP6Q538Z0 58 aa5.03□□□□□ -1.6
DDB1-224ENST00000545894 MT2AP02795 61 aa5□□□□□ -1.61
DDB1-224ENST00000545894 TNP1P09430 55 aa4.99□□□□□ -1.61
DDB1-224ENST00000545894 MT1FP04733 61 aa4.97□□□□□ -1.61
DDB1-224ENST00000545894 KRTAP23-1A1A580 65 aa4.97□□□□□ -1.61
DDB1-224ENST00000545894 KRTAP10-10P60014 251 aa4.94□□□□□ -1.62
DDB1-224ENST00000545894 KRTAP9-3Q9BYQ3 159 aa4.88□□□□□ -1.63
DDB1-224ENST00000545894 SPRR5A0A1B0GTR4 108 aa4.86□□□□□ -1.63
DDB1-224ENST00000545894 KRTAP9-2Q9BYQ4 174 aa4.84□□□□□ -1.63
DDB1-224ENST00000545894 SPRR2GQ9BYE4 73 aa4.82□□□□□ -1.64
DDB1-224ENST00000545894 KRTAP19-1Q8IUB9 90 aa4.78□□□□□ -1.64
DDB1-224ENST00000545894 USH2AO75445 5202 aa4.74□□□□□ -1.65
DDB1-224ENST00000545894 LCE3AQ5TA76 89 aa4.7□□□□□ -1.66
DDB1-224ENST00000545894 KRTAP19-8Q3LI54 63 aa4.67□□□□□ -1.66
DDB1-224ENST00000545894 FSIP2Q5CZC0 6907 aa4.66□□□□□ -1.66
DDB1-224ENST00000545894 MT1BP07438 61 aa4.65□□□□□ -1.67
DDB1-224ENST00000545894 SSPOA2VEC9 5147 aa4.63□□□□□ -1.67
DDB1-224ENST00000545894 CRCT1Q9UGL9 99 aa4.63□□□□□ -1.67
DDB1-224ENST00000545894 KRTAP8-1Q8IUC2 63 aa4.59□□□□□ -1.67
DDB1-224ENST00000545894 KRTAP9-6A0A140TA67 174 aa4.57□□□□□ -1.68
DDB1-224ENST00000545894 KRTAP19-6Q3LI70 58 aa4.55□□□□□ -1.68
DDB1-224ENST00000545894 LOC100996750A0A140TA64 210 aa4.53□□□□□ -1.68
DDB1-224ENST00000545894 KRTAP4-6Q9BYQ5 205 aa4.53□□□□□ -1.68
DDB1-224ENST00000545894 KRTAP10-5P60370 271 aa4.52□□□□□ -1.69
DDB1-224ENST00000545894 MT1XP80297 61 aa4.51□□□□□ -1.69
DDB1-224ENST00000545894 FCGBPQ9Y6R7 5405 aaPredicted RBP4.48□□□□□ -1.69
DDB1-224ENST00000545894 KRTAP12-3P60328 96 aa4.47□□□□□ -1.69
DDB1-224ENST00000545894 KRTAP10-12P60413 245 aa4.47□□□□□ -1.69
DDB1-224ENST00000545894 PRO2289Q9P1D8 64 aa4.41□□□□□ -1.7
DDB1-224ENST00000545894 INE1O15225 51 aa4.39□□□□□ -1.71
DDB1-224ENST00000545894 KRTAP10-7P60409 375 aaPredicted RBP4.39□□□□□ -1.71
DDB1-224ENST00000545894 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.3□□□□□ -1.72
DDB1-224ENST00000545894 MACF1Q9UPN3 7388 aaKnown RBP4.27□□□□□ -1.73
DDB1-224ENST00000545894 KRTAP19-5Q3LI72 72 aa4.24□□□□□ -1.73
DDB1-224ENST00000545894 LCE3CQ5T5A8 94 aa4.22□□□□□ -1.73
DDB1-224ENST00000545894 KMT2DO14686 5537 aa4.18□□□□□ -1.74
DDB1-224ENST00000545894 SYNE2Q8WXH0 6885 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms