RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 S4R3F8 94 aa5.69□□□□□ -1.5
SNHG1-221ENST00000544983 C20orf197Q8N268 126 aa5.66□□□□□ -1.5
SNHG1-221ENST00000544983 COX7CP15954 63 aa5.65□□□□□ -1.5
SNHG1-221ENST00000544983 CSAG1Q6PB30 78 aa5.65□□□□□ -1.5
SNHG1-221ENST00000544983 DMAC1Q96GE9 116 aa5.64□□□□□ -1.51
SNHG1-221ENST00000544983 LCA10Q71F78 164 aa5.63□□□□□ -1.51
SNHG1-221ENST00000544983 KRTAP9-8Q9BYQ0 159 aa5.63□□□□□ -1.51
SNHG1-221ENST00000544983 SNURFQ9Y675 71 aa5.63□□□□□ -1.51
SNHG1-221ENST00000544983 SPANXA2-OT1Q8N9U9 137 aa5.61□□□□□ -1.51
SNHG1-221ENST00000544983 ANAPC13Q9BS18 74 aa5.61□□□□□ -1.51
SNHG1-221ENST00000544983 NDUFC1O43677 76 aa5.6□□□□□ -1.51
SNHG1-221ENST00000544983 ACYP2P14621 99 aa5.59□□□□□ -1.51
SNHG1-221ENST00000544983 MT2AP02795 61 aa5.57□□□□□ -1.52
SNHG1-221ENST00000544983 KRTAP10-10P60014 251 aa5.55□□□□□ -1.52
SNHG1-221ENST00000544983 MT1FP04733 61 aa5.52□□□□□ -1.53
SNHG1-221ENST00000544983 H0YAA0 97 aa5.5□□□□□ -1.53
SNHG1-221ENST00000544983 SPTSSBQ8NFR3 76 aa5.5□□□□□ -1.53
SNHG1-221ENST00000544983 H7BZZ5 65 aa5.49□□□□□ -1.53
SNHG1-221ENST00000544983 CHKB-CPT1BH3BT56 60 aa5.46□□□□□ -1.54
SNHG1-221ENST00000544983 SYNE2Q8WXH0 6885 aaKnown RBP5.46□□□□□ -1.54
SNHG1-221ENST00000544983 SSPOA2VEC9 5147 aa5.46□□□□□ -1.54
SNHG1-221ENST00000544983 KRTAP9-3Q9BYQ3 159 aa5.45□□□□□ -1.54
SNHG1-221ENST00000544983 FCGBPQ9Y6R7 5405 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-221ENST00000544983 CCDC179H3BU77 68 aa5.43□□□□□ -1.54
SNHG1-221ENST00000544983 CYSTM1Q9H1C7 97 aa5.42□□□□□ -1.54
SNHG1-221ENST00000544983 CRIPTQ9P021 101 aa5.41□□□□□ -1.54
SNHG1-221ENST00000544983 MACF1Q9UPN3 7388 aaKnown RBP5.4□□□□□ -1.54
SNHG1-221ENST00000544983 ATP5EP56381 51 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-221ENST00000544983 USH2AO75445 5202 aa5.39□□□□□ -1.55
SNHG1-221ENST00000544983 ADM2Q7Z4H4 148 aa5.37□□□□□ -1.55
SNHG1-221ENST00000544983 COA5Q86WW8 74 aa5.37□□□□□ -1.55
SNHG1-221ENST00000544983 LOC100996750A0A140TA64 210 aa5.36□□□□□ -1.55
SNHG1-221ENST00000544983 KRTAP4-6Q9BYQ5 205 aa5.36□□□□□ -1.55
SNHG1-221ENST00000544983 TMEM258P61165 79 aa5.33□□□□□ -1.56
SNHG1-221ENST00000544983 SPRR2GQ9BYE4 73 aa5.33□□□□□ -1.56
SNHG1-221ENST00000544983 KRTAP19-1Q8IUB9 90 aa5.31□□□□□ -1.56
SNHG1-221ENST00000544983 P0C880 135 aa5.27□□□□□ -1.57
SNHG1-221ENST00000544983 R4GN34 69 aa5.25□□□□□ -1.57
SNHG1-221ENST00000544983 SEC61GP60059 68 aa5.24□□□□□ -1.57
SNHG1-221ENST00000544983 KRTAP19-8Q3LI54 63 aa5.24□□□□□ -1.57
SNHG1-221ENST00000544983 KRTAP6-3Q3LI67 103 aa5.23□□□□□ -1.57
SNHG1-221ENST00000544983 NEBP20929 6669 aa5.22□□□□□ -1.57
SNHG1-221ENST00000544983 Q5VV11 94 aa5.22□□□□□ -1.57
SNHG1-221ENST00000544983 SERP1Q9Y6X1 66 aa5.21□□□□□ -1.58
SNHG1-221ENST00000544983 M0QZ58 72 aa5.19□□□□□ -1.58
SNHG1-221ENST00000544983 PCP4P48539 62 aa5.18□□□□□ -1.58
SNHG1-221ENST00000544983 KRTAP20-1Q3LI63 56 aa5.16□□□□□ -1.58
SNHG1-221ENST00000544983 MT1BP07438 61 aa5.15□□□□□ -1.59
SNHG1-221ENST00000544983 KRTAP19-6Q3LI70 58 aa5.15□□□□□ -1.59
SNHG1-221ENST00000544983 A0A1B0GU69 56 aa5.12□□□□□ -1.59
SNHG1-221ENST00000544983 PRR15LQ9BU68 103 aa5.1□□□□□ -1.59
SNHG1-221ENST00000544983 PLAC4Q8WY50 150 aa5.09□□□□□ -1.59
SNHG1-221ENST00000544983 A0A1B0GU33 70 aa5.08□□□□□ -1.6
SNHG1-221ENST00000544983 LINC01554Q52M75 96 aa5.08□□□□□ -1.6
SNHG1-221ENST00000544983 LINC01558Q9Y6Z2 57 aa5.08□□□□□ -1.6
SNHG1-221ENST00000544983 A6NN06 94 aa5.07□□□□□ -1.6
SNHG1-221ENST00000544983 V9GYY9 64 aa5.03□□□□□ -1.6
SNHG1-221ENST00000544983 KRTAP13-4Q3LI77 160 aa5.02□□□□□ -1.61
SNHG1-221ENST00000544983 KRTAP10-5P60370 271 aa5.01□□□□□ -1.61
SNHG1-221ENST00000544983 RPS28P62857 69 aaKnown RBP5.01□□□□□ -1.61
SNHG1-221ENST00000544983 PRO2289Q9P1D8 64 aa5.01□□□□□ -1.61
SNHG1-221ENST00000544983 MUC12Q9UKN1 5478 aa4.99□□□□□ -1.61
SNHG1-221ENST00000544983 SMIM26A0A096LP01 95 aa4.97□□□□□ -1.61
SNHG1-221ENST00000544983 Q1T7F1 81 aa4.96□□□□□ -1.62
SNHG1-221ENST00000544983 SPATA8Q6RVD6 105 aa4.96□□□□□ -1.62
SNHG1-221ENST00000544983 A0A0D9SG42 100 aa4.92□□□□□ -1.62
SNHG1-221ENST00000544983 UQCR11O14957 56 aa4.92□□□□□ -1.62
SNHG1-221ENST00000544983 MT1XP80297 61 aa4.91□□□□□ -1.62
SNHG1-221ENST00000544983 KRTAP4-8Q9BYQ9 185 aa4.89□□□□□ -1.63
SNHG1-221ENST00000544983 CAMK2N1Q7Z7J9 78 aa4.87□□□□□ -1.63
SNHG1-221ENST00000544983 KMT2DO14686 5537 aa4.86□□□□□ -1.63
SNHG1-221ENST00000544983 KRTAP2-3P0C7H8 128 aa4.86□□□□□ -1.63
SNHG1-221ENST00000544983 KRTAP2-4Q9BYR9 128 aa4.86□□□□□ -1.63
SNHG1-221ENST00000544983 KRTAP12-1P59990 96 aa4.85□□□□□ -1.63
SNHG1-221ENST00000544983 PSPHP1O15172 72 aa4.84□□□□□ -1.63
SNHG1-221ENST00000544983 SPINT4Q6UDR6 99 aa4.84□□□□□ -1.63
SNHG1-221ENST00000544983 A8MU10 97 aa4.82□□□□□ -1.64
SNHG1-221ENST00000544983 MIR22HGQ0VDD5 57 aa4.81□□□□□ -1.64
SNHG1-221ENST00000544983 GPR98Q8WXG9 6306 aa4.81□□□□□ -1.64
SNHG1-221ENST00000544983 KRTAP12-2P59991 146 aa4.79□□□□□ -1.64
SNHG1-221ENST00000544983 A6NED7 52 aa4.74□□□□□ -1.65
SNHG1-221ENST00000544983 MDN1Q9NU22 5596 aa4.74□□□□□ -1.65
SNHG1-221ENST00000544983 K7ERS5 55 aa4.73□□□□□ -1.65
SNHG1-221ENST00000544983 KRTAP10-12P60413 245 aa4.69□□□□□ -1.66
SNHG1-221ENST00000544983 KRTAP5-9P26371 169 aa4.68□□□□□ -1.66
SNHG1-221ENST00000544983 KRTAP10-7P60409 375 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-221ENST00000544983 KRTAP4-12Q9BQ66 201 aa4.67□□□□□ -1.66
SNHG1-221ENST00000544983 KRTAP2-2Q9BYT5 123 aa4.66□□□□□ -1.66
SNHG1-221ENST00000544983 KRTAP2-1Q9BYU5 128 aa4.66□□□□□ -1.66
SNHG1-221ENST00000544983 KRTAP8-1Q8IUC2 63 aa4.61□□□□□ -1.67
SNHG1-221ENST00000544983 CDC42SE1Q9NRR8 79 aa4.61□□□□□ -1.67
SNHG1-221ENST00000544983 C10orf95Q9H7T3 257 aa4.59□□□□□ -1.67
SNHG1-221ENST00000544983 TNP1P09430 55 aa4.58□□□□□ -1.68
SNHG1-221ENST00000544983 LCE3BQ5TA77 95 aa4.58□□□□□ -1.68
SNHG1-221ENST00000544983 KRTAP9-9Q9BYP9 154 aa4.57□□□□□ -1.68
SNHG1-221ENST00000544983 KRTAP9-4Q9BYQ2 154 aa4.57□□□□□ -1.68
SNHG1-221ENST00000544983 KRTAP4-8A0A0G2JLE6 195 aa4.56□□□□□ -1.68
SNHG1-221ENST00000544983 SVIPQ8NHG7 77 aa4.52□□□□□ -1.69
SNHG1-221ENST00000544983 SPRR2FQ96RM1 72 aa4.51□□□□□ -1.69
SNHG1-221ENST00000544983 KRTAP25-1Q3LHN0 102 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms