RNA–Protein interactions for RNA: ENST00000544814.5

SSUH2-217, Transcript of ssu-2 homolog (C. elegans), humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSUH2, Length 1,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSUH2-217ENST00000544814 LCA10Q71F78 164 aa10.7□□□□□ -0.7
SSUH2-217ENST00000544814 SPTSSBQ8NFR3 76 aa10.69□□□□□ -0.7
SSUH2-217ENST00000544814 LCE2CQ5TA81 110 aa10.68□□□□□ -0.7
SSUH2-217ENST00000544814 KRTAP3-3Q9BYR6 98 aa10.63□□□□□ -0.71
SSUH2-217ENST00000544814 CSAG1Q6PB30 78 aa10.58□□□□□ -0.72
SSUH2-217ENST00000544814 FLGP20930 4061 aaPredicted RBP10.57□□□□□ -0.72
SSUH2-217ENST00000544814 SMIM26A0A096LP01 95 aa10.55□□□□□ -0.72
SSUH2-217ENST00000544814 FAT4Q6V0I7 4981 aa10.54□□□□□ -0.72
SSUH2-217ENST00000544814 MT1HP80294 61 aa10.49□□□□□ -0.73
SSUH2-217ENST00000544814 M0R2T5 61 aa10.44□□□□□ -0.74
SSUH2-217ENST00000544814 V9GYY9 64 aa10.4□□□□□ -0.74
SSUH2-217ENST00000544814 LINC01558Q9Y6Z2 57 aa10.39□□□□□ -0.75
SSUH2-217ENST00000544814 Q1T7F1 81 aa10.38□□□□□ -0.75
SSUH2-217ENST00000544814 SEC61GP60059 68 aa10.34□□□□□ -0.75
SSUH2-217ENST00000544814 H0YAA0 97 aa10.31□□□□□ -0.76
SSUH2-217ENST00000544814 A0A1B0GU69 56 aa10.3□□□□□ -0.76
SSUH2-217ENST00000544814 PRR15LQ9BU68 103 aa10.28□□□□□ -0.76
SSUH2-217ENST00000544814 ADM2Q7Z4H4 148 aa10.25□□□□□ -0.77
SSUH2-217ENST00000544814 LCE2AQ5TA79 106 aaPredicted RBP10.22□□□□□ -0.77
SSUH2-217ENST00000544814 KRTAP3-2Q9BYR7 98 aa10.21□□□□□ -0.78
SSUH2-217ENST00000544814 PSPHP1O15172 72 aa10.19□□□□□ -0.78
SSUH2-217ENST00000544814 KRTAP10-6P60371 365 aaPredicted RBP10.17□□□□□ -0.78
SSUH2-217ENST00000544814 P0C880 135 aa10.15□□□□□ -0.79
SSUH2-217ENST00000544814 Q5VV11 94 aa10.09□□□□□ -0.79
SSUH2-217ENST00000544814 LORP23490 312 aaPredicted RBP10.08□□□□□ -0.8
SSUH2-217ENST00000544814 KRTAP9-8Q9BYQ0 159 aa10.07□□□□□ -0.8
SSUH2-217ENST00000544814 A0A1B0GU33 70 aa10.06□□□□□ -0.8
SSUH2-217ENST00000544814 MT2AP02795 61 aa10.04□□□□□ -0.8
SSUH2-217ENST00000544814 KRTAP10-10P60014 251 aa9.98□□□□□ -0.81
SSUH2-217ENST00000544814 UQCR11O14957 56 aa9.96□□□□□ -0.81
SSUH2-217ENST00000544814 CRIPTQ9P021 101 aa9.96□□□□□ -0.81
SSUH2-217ENST00000544814 MT1FP04733 61 aa9.96□□□□□ -0.82
SSUH2-217ENST00000544814 R4GN34 69 aa9.93□□□□□ -0.82
SSUH2-217ENST00000544814 M0QZ58 72 aa9.93□□□□□ -0.82
SSUH2-217ENST00000544814 A6NED7 52 aa9.91□□□□□ -0.82
SSUH2-217ENST00000544814 SPATA8Q6RVD6 105 aa9.85□□□□□ -0.83
SSUH2-217ENST00000544814 KRTAP13-4Q3LI77 160 aa9.85□□□□□ -0.83
SSUH2-217ENST00000544814 MIR22HGQ0VDD5 57 aa9.82□□□□□ -0.84
SSUH2-217ENST00000544814 SPRR2GQ9BYE4 73 aa9.75□□□□□ -0.85
SSUH2-217ENST00000544814 KRTAP9-3Q9BYQ3 159 aa9.73□□□□□ -0.85
SSUH2-217ENST00000544814 LINC01554Q52M75 96 aa9.71□□□□□ -0.85
SSUH2-217ENST00000544814 KRTAP19-1Q8IUB9 90 aa9.71□□□□□ -0.85
SSUH2-217ENST00000544814 CDC42SE1Q9NRR8 79 aa9.7□□□□□ -0.86
SSUH2-217ENST00000544814 A0A0D9SG42 100 aa9.69□□□□□ -0.86
SSUH2-217ENST00000544814 A8MU10 97 aa9.68□□□□□ -0.86
SSUH2-217ENST00000544814 BRK1Q8WUW1 75 aa9.64□□□□□ -0.87
SSUH2-217ENST00000544814 A6NN06 94 aa9.56□□□□□ -0.88
SSUH2-217ENST00000544814 KRTAP19-8Q3LI54 63 aa9.53□□□□□ -0.88
SSUH2-217ENST00000544814 SPINT4Q6UDR6 99 aa9.49□□□□□ -0.89
SSUH2-217ENST00000544814 KRTAP12-1P59990 96 aa9.49□□□□□ -0.89
SSUH2-217ENST00000544814 K7ERS5 55 aa9.47□□□□□ -0.89
SSUH2-217ENST00000544814 LCE2BO14633 110 aa9.47□□□□□ -0.89
SSUH2-217ENST00000544814 KRTAP12-2P59991 146 aa9.45□□□□□ -0.9
SSUH2-217ENST00000544814 PLAC4Q8WY50 150 aa9.43□□□□□ -0.9
SSUH2-217ENST00000544814 LCE2DQ5TA82 110 aaPredicted RBP9.4□□□□□ -0.9
SSUH2-217ENST00000544814 MT1BP07438 61 aa9.38□□□□□ -0.91
SSUH2-217ENST00000544814 PRO0628Q9UI54 55 aa9.31□□□□□ -0.92
SSUH2-217ENST00000544814 CAMK2N1Q7Z7J9 78 aa9.28□□□□□ -0.92
SSUH2-217ENST00000544814 USH2AO75445 5202 aa9.24□□□□□ -0.93
SSUH2-217ENST00000544814 PMAIP1Q13794 54 aa9.12□□□□□ -0.95
SSUH2-217ENST00000544814 KRTAP9-2Q9BYQ4 174 aa9.1□□□□□ -0.95
SSUH2-217ENST00000544814 PRO2289Q9P1D8 64 aa9.05□□□□□ -0.96
SSUH2-217ENST00000544814 MT1XP80297 61 aa9.04□□□□□ -0.96
SSUH2-217ENST00000544814 KRTAP10-5P60370 271 aa9.02□□□□□ -0.97
SSUH2-217ENST00000544814 ROMO1P60602 79 aa9□□□□□ -0.97
SSUH2-217ENST00000544814 C10orf95Q9H7T3 257 aa8.98□□□□□ -0.97
SSUH2-217ENST00000544814 SSPOA2VEC9 5147 aa8.97□□□□□ -0.97
SSUH2-217ENST00000544814 KRTAP19-6Q3LI70 58 aa8.97□□□□□ -0.97
SSUH2-217ENST00000544814 FSIP2Q5CZC0 6907 aa8.9□□□□□ -0.98
SSUH2-217ENST00000544814 TNP1P09430 55 aa8.8□□□□□ -1
SSUH2-217ENST00000544814 SVIPQ8NHG7 77 aa8.8□□□□□ -1
SSUH2-217ENST00000544814 KRTAP25-1Q3LHN0 102 aa8.77□□□□□ -1.01
SSUH2-217ENST00000544814 CRCT1Q9UGL9 99 aa8.77□□□□□ -1.01
SSUH2-217ENST00000544814 KRTAP10-7P60409 375 aaPredicted RBP8.65□□□□□ -1.02
SSUH2-217ENST00000544814 KTN1-AS1Q86SY8 53 aa8.65□□□□□ -1.02
SSUH2-217ENST00000544814 FCGBPQ9Y6R7 5405 aaPredicted RBP8.62□□□□□ -1.03
SSUH2-217ENST00000544814 KRTAP10-12P60413 245 aa8.59□□□□□ -1.03
SSUH2-217ENST00000544814 PRAC1Q96KF2 57 aa8.51□□□□□ -1.05
SSUH2-217ENST00000544814 KRTAP9-6A0A140TA67 174 aa8.49□□□□□ -1.05
SSUH2-217ENST00000544814 KRTAP23-1A1A580 65 aa8.48□□□□□ -1.05
SSUH2-217ENST00000544814 PP632Q6XCG6 107 aa8.44□□□□□ -1.06
SSUH2-217ENST00000544814 LCE3AQ5TA76 89 aa8.42□□□□□ -1.06
SSUH2-217ENST00000544814 KRTAP4-8A0A0G2JLE6 195 aa8.36□□□□□ -1.07
SSUH2-217ENST00000544814 KRTAP4-8Q9BYQ9 185 aa8.36□□□□□ -1.07
SSUH2-217ENST00000544814 KMT2DO14686 5537 aa8.27□□□□□ -1.08
SSUH2-217ENST00000544814 KRTAP8-1Q8IUC2 63 aa8.25□□□□□ -1.09
SSUH2-217ENST00000544814 MACF1Q9UPN3 7388 aaKnown RBP8.18□□□□□ -1.1
SSUH2-217ENST00000544814 KRTAP19-5Q3LI72 72 aa8.13□□□□□ -1.11
SSUH2-217ENST00000544814 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.11□□□□□ -1.11
SSUH2-217ENST00000544814 KRTAP12-3P60328 96 aa8.11□□□□□ -1.11
SSUH2-217ENST00000544814 KRTAP19-7Q3SYF9 63 aa8.06□□□□□ -1.12
SSUH2-217ENST00000544814 SYNE2Q8WXH0 6885 aaKnown RBP7.95□□□□□ -1.14
SSUH2-217ENST00000544814 MT1EP04732 61 aa7.95□□□□□ -1.14
SSUH2-217ENST00000544814 SPRR2FQ96RM1 72 aa7.95□□□□□ -1.14
SSUH2-217ENST00000544814 KRTAP5-9P26371 169 aa7.92□□□□□ -1.14
SSUH2-217ENST00000544814 KRTAP6-3Q3LI67 103 aa7.9□□□□□ -1.14
SSUH2-217ENST00000544814 KRTAP15-1Q3LI76 137 aa7.9□□□□□ -1.14
SSUH2-217ENST00000544814 MT1LQ93083 61 aa7.76□□□□□ -1.17
SSUH2-217ENST00000544814 KRTAP9-7A8MTY7 169 aa7.74□□□□□ -1.17
SSUH2-217ENST00000544814 MUC12Q9UKN1 5478 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms