RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 A0A1B0GU33 70 aa9.14□□□□□ -0.95
SCARB1-208ENST00000544327 H0YAA0 97 aa9.13□□□□□ -0.95
SCARB1-208ENST00000544327 H1FX-AS1Q4G0G2 97 aa9.13□□□□□ -0.95
SCARB1-208ENST00000544327 KRTAP3-3Q9BYR6 98 aa9.07□□□□□ -0.96
SCARB1-208ENST00000544327 KIAA1109Q2LD37 5005 aa9.06□□□□□ -0.96
SCARB1-208ENST00000544327 DMBT1Q9UGM3 2413 aaPredicted RBP9.05□□□□□ -0.96
SCARB1-208ENST00000544327 LINC01554Q52M75 96 aa9.01□□□□□ -0.97
SCARB1-208ENST00000544327 TPRXLQ17RH7 258 aa9.01□□□□□ -0.97
SCARB1-208ENST00000544327 S4R3F8 94 aa9□□□□□ -0.97
SCARB1-208ENST00000544327 EPPK1P58107 5090 aaKnown RBP8.98□□□□□ -0.97
SCARB1-208ENST00000544327 ADM2Q7Z4H4 148 aa8.96□□□□□ -0.97
SCARB1-208ENST00000544327 PRAC1Q96KF2 57 aa8.96□□□□□ -0.98
SCARB1-208ENST00000544327 MYCBP2O75592 4640 aa8.95□□□□□ -0.98
SCARB1-208ENST00000544327 KRTAP10-6P60371 365 aaPredicted RBP8.95□□□□□ -0.98
SCARB1-208ENST00000544327 KRTAP3-2Q9BYR7 98 aa8.91□□□□□ -0.98
SCARB1-208ENST00000544327 K7ERS5 55 aa8.81□□□□□ -1
SCARB1-208ENST00000544327 KRTAP4-5Q9BYR2 181 aa8.79□□□□□ -1
SCARB1-208ENST00000544327 KRTAP13-4Q3LI77 160 aa8.77□□□□□ -1
SCARB1-208ENST00000544327 CSAG1Q6PB30 78 aa8.75□□□□□ -1.01
SCARB1-208ENST00000544327 LRP2P98164 4655 aa8.75□□□□□ -1.01
SCARB1-208ENST00000544327 P0C880 135 aa8.73□□□□□ -1.01
SCARB1-208ENST00000544327 LPAP08519 4548 aa8.69□□□□□ -1.02
SCARB1-208ENST00000544327 SEC61BP60468 96 aaKnown RBP8.66□□□□□ -1.02
SCARB1-208ENST00000544327 A0A0D9SG42 100 aa8.62□□□□□ -1.03
SCARB1-208ENST00000544327 ABCA13Q86UQ4 5058 aa8.62□□□□□ -1.03
SCARB1-208ENST00000544327 KRTAP25-1Q3LHN0 102 aa8.61□□□□□ -1.03
SCARB1-208ENST00000544327 ROMO1P60602 79 aa8.59□□□□□ -1.03
SCARB1-208ENST00000544327 M0QZ58 72 aa8.56□□□□□ -1.04
SCARB1-208ENST00000544327 J3QL48 77 aa8.54□□□□□ -1.04
SCARB1-208ENST00000544327 BIRC6Q9NR09 4857 aa8.53□□□□□ -1.04
SCARB1-208ENST00000544327 MUC17Q685J3 4493 aa8.53□□□□□ -1.04
SCARB1-208ENST00000544327 HERC2O95714 4834 aa8.52□□□□□ -1.04
SCARB1-208ENST00000544327 KRTAP12-1P59990 96 aa8.47□□□□□ -1.05
SCARB1-208ENST00000544327 KRTAP12-2P59991 146 aa8.47□□□□□ -1.05
SCARB1-208ENST00000544327 KRTAP4-1Q9BYQ7 146 aa8.47□□□□□ -1.05
SCARB1-208ENST00000544327 KRTAP19-2Q3LHN2 52 aa8.39□□□□□ -1.07
SCARB1-208ENST00000544327 SPINT4Q6UDR6 99 aa8.37□□□□□ -1.07
SCARB1-208ENST00000544327 CRIPTQ9P021 101 aa8.36□□□□□ -1.07
SCARB1-208ENST00000544327 R4GN34 69 aa8.29□□□□□ -1.08
SCARB1-208ENST00000544327 A0A0A0MQY5 61 aa8.23□□□□□ -1.09
SCARB1-208ENST00000544327 LORP23490 312 aaPredicted RBP8.21□□□□□ -1.1
SCARB1-208ENST00000544327 C10orf95Q9H7T3 257 aa8.17□□□□□ -1.1
SCARB1-208ENST00000544327 PCLOQ9Y6V0 5065 aa8.11□□□□□ -1.11
SCARB1-208ENST00000544327 FLGP20930 4061 aaPredicted RBP8.1□□□□□ -1.11
SCARB1-208ENST00000544327 HMCN2Q8NDA2 5059 aa8.05□□□□□ -1.12
SCARB1-208ENST00000544327 HERC1Q15751 4861 aa8.04□□□□□ -1.12
SCARB1-208ENST00000544327 LCE2CQ5TA81 110 aa7.92□□□□□ -1.14
SCARB1-208ENST00000544327 MUC2Q02817 5179 aa7.86□□□□□ -1.15
SCARB1-208ENST00000544327 CAMK2N1Q7Z7J9 78 aa7.83□□□□□ -1.16
SCARB1-208ENST00000544327 KRTAP15-1Q3LI76 137 aa7.82□□□□□ -1.16
SCARB1-208ENST00000544327 NDUFAF8A1L188 74 aa7.76□□□□□ -1.17
SCARB1-208ENST00000544327 PP632Q6XCG6 107 aa7.73□□□□□ -1.17
SCARB1-208ENST00000544327 SPRR2GQ9BYE4 73 aa7.71□□□□□ -1.17
SCARB1-208ENST00000544327 MT1HP80294 61 aa7.7□□□□□ -1.18
SCARB1-208ENST00000544327 RNF213Q63HN8 5207 aa7.65□□□□□ -1.18
SCARB1-208ENST00000544327 KRTAP19-1Q8IUB9 90 aa7.64□□□□□ -1.19
SCARB1-208ENST00000544327 M0R2T5 61 aa7.62□□□□□ -1.19
SCARB1-208ENST00000544327 LUZP6Q538Z0 58 aa7.6□□□□□ -1.19
SCARB1-208ENST00000544327 KRTAP23-1A1A580 65 aa7.59□□□□□ -1.19
SCARB1-208ENST00000544327 UBR4Q5T4S7 5183 aa7.59□□□□□ -1.19
SCARB1-208ENST00000544327 TNP1P09430 55 aa7.59□□□□□ -1.19
SCARB1-208ENST00000544327 PLAC4Q8WY50 150 aa7.55□□□□□ -1.2
SCARB1-208ENST00000544327 FAT4Q6V0I7 4981 aa7.55□□□□□ -1.2
SCARB1-208ENST00000544327 MT2AP02795 61 aa7.55□□□□□ -1.2
SCARB1-208ENST00000544327 MT1FP04733 61 aa7.52□□□□□ -1.2
SCARB1-208ENST00000544327 KRTAP9-8Q9BYQ0 159 aa7.52□□□□□ -1.21
SCARB1-208ENST00000544327 KRTAP10-10P60014 251 aa7.48□□□□□ -1.21
SCARB1-208ENST00000544327 KRTAP19-8Q3LI54 63 aa7.43□□□□□ -1.22
SCARB1-208ENST00000544327 MT1BP07438 61 aa7.27□□□□□ -1.25
SCARB1-208ENST00000544327 KRTAP9-3Q9BYQ3 159 aa7.22□□□□□ -1.25
SCARB1-208ENST00000544327 KRTAP10-5P60370 271 aa7.18□□□□□ -1.26
SCARB1-208ENST00000544327 MT1XP80297 61 aa7.18□□□□□ -1.26
SCARB1-208ENST00000544327 LCE3AQ5TA76 89 aa7.17□□□□□ -1.26
SCARB1-208ENST00000544327 SPRR5A0A1B0GTR4 108 aa7.16□□□□□ -1.26
SCARB1-208ENST00000544327 KRTAP8-1Q8IUC2 63 aa7.08□□□□□ -1.28
SCARB1-208ENST00000544327 KRTAP10-12P60413 245 aa6.98□□□□□ -1.29
SCARB1-208ENST00000544327 PRO2289Q9P1D8 64 aa6.97□□□□□ -1.29
SCARB1-208ENST00000544327 LCE2AQ5TA79 106 aaPredicted RBP6.94□□□□□ -1.3
SCARB1-208ENST00000544327 KRTAP10-7P60409 375 aaPredicted RBP6.92□□□□□ -1.3
SCARB1-208ENST00000544327 LCE2BO14633 110 aa6.91□□□□□ -1.3
SCARB1-208ENST00000544327 KRTAP12-3P60328 96 aa6.87□□□□□ -1.31
SCARB1-208ENST00000544327 KRTAP19-5Q3LI72 72 aa6.62□□□□□ -1.35
SCARB1-208ENST00000544327 USH2AO75445 5202 aa6.54□□□□□ -1.36
SCARB1-208ENST00000544327 INE1O15225 51 aa6.48□□□□□ -1.37
SCARB1-208ENST00000544327 KRTAP4-8A0A0G2JLE6 195 aa6.47□□□□□ -1.37
SCARB1-208ENST00000544327 LCE3CQ5T5A8 94 aa6.47□□□□□ -1.37
SCARB1-208ENST00000544327 KRTAP4-8Q9BYQ9 185 aa6.47□□□□□ -1.37
SCARB1-208ENST00000544327 KRTAP19-7Q3SYF9 63 aa6.4□□□□□ -1.38
SCARB1-208ENST00000544327 KRTAP19-4Q3LI73 84 aa6.36□□□□□ -1.39
SCARB1-208ENST00000544327 SSPOA2VEC9 5147 aa6.34□□□□□ -1.39
SCARB1-208ENST00000544327 KRTAP19-6Q3LI70 58 aa6.33□□□□□ -1.4
SCARB1-208ENST00000544327 KMT2DO14686 5537 aa6.3□□□□□ -1.4
SCARB1-208ENST00000544327 MT1EP04732 61 aa6.24□□□□□ -1.41
SCARB1-208ENST00000544327 MT1LQ93083 61 aa6.21□□□□□ -1.42
SCARB1-208ENST00000544327 KRTAP9-6A8MVA2 160 aa6.18□□□□□ -1.42
SCARB1-208ENST00000544327 LCE2DQ5TA82 110 aaPredicted RBP6.1□□□□□ -1.43
SCARB1-208ENST00000544327 KRTAP4-7Q9BYR0 210 aa6.1□□□□□ -1.43
SCARB1-208ENST00000544327 FSIP2Q5CZC0 6907 aa6.01□□□□□ -1.45
SCARB1-208ENST00000544327 KRTAP2-3P0C7H8 128 aa5.99□□□□□ -1.45
SCARB1-208ENST00000544327 KRTAP2-4Q9BYR9 128 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms