RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 A8MUN3 132 aa10.53□□□□□ -0.72
CHFR-222ENST00000544093 MP68P56378 58 aa10.53□□□□□ -0.72
CHFR-222ENST00000544093 KLKP1Q107X0 134 aa10.52□□□□□ -0.73
CHFR-222ENST00000544093 SPRR2GQ9BYE4 73 aa10.52□□□□□ -0.73
CHFR-222ENST00000544093 LINC00208Q96KT6 92 aa10.51□□□□□ -0.73
CHFR-222ENST00000544093 OCR1Q9BZK8 76 aa10.51□□□□□ -0.73
CHFR-222ENST00000544093 NDUFC1O43677 76 aa10.48□□□□□ -0.73
CHFR-222ENST00000544093 IMUPQ9GZP8 106 aa10.47□□□□□ -0.73
CHFR-222ENST00000544093 Q5VV11 94 aa10.46□□□□□ -0.73
CHFR-222ENST00000544093 CRIPTQ9P021 101 aa10.46□□□□□ -0.73
CHFR-222ENST00000544093 KRTAP19-8Q3LI54 63 aa10.43□□□□□ -0.74
CHFR-222ENST00000544093 SYNE2Q8WXH0 6885 aaKnown RBP10.4□□□□□ -0.74
CHFR-222ENST00000544093 H0YAA0 97 aa10.4□□□□□ -0.74
CHFR-222ENST00000544093 H3BPC8 53 aa10.4□□□□□ -0.74
CHFR-222ENST00000544093 MT1BP07438 61 aa10.37□□□□□ -0.75
CHFR-222ENST00000544093 SCGB1A1P11684 91 aa10.36□□□□□ -0.75
CHFR-222ENST00000544093 A6NN06 94 aa10.31□□□□□ -0.76
CHFR-222ENST00000544093 ADM2Q7Z4H4 148 aa10.21□□□□□ -0.77
CHFR-222ENST00000544093 DMAC1Q96GE9 116 aa10.19□□□□□ -0.78
CHFR-222ENST00000544093 K7ERU9 68 aa10.18□□□□□ -0.78
CHFR-222ENST00000544093 KRTAP6-3Q3LI67 103 aa10.18□□□□□ -0.78
CHFR-222ENST00000544093 KRTAP10-5P60370 271 aa10.17□□□□□ -0.78
CHFR-222ENST00000544093 SMIM20Q8N5G0 67 aa10.14□□□□□ -0.79
CHFR-222ENST00000544093 C20orf197Q8N268 126 aa10.1□□□□□ -0.79
CHFR-222ENST00000544093 MT-ATP8P03928 68 aa10.08□□□□□ -0.8
CHFR-222ENST00000544093 TRAV7A0A075B6U4 112 aa10.06□□□□□ -0.8
CHFR-222ENST00000544093 R4GN34 69 aa10□□□□□ -0.81
CHFR-222ENST00000544093 ACYP2P14621 99 aa9.99□□□□□ -0.81
CHFR-222ENST00000544093 P0C880 135 aa9.94□□□□□ -0.82
CHFR-222ENST00000544093 PLAC4Q8WY50 150 aa9.92□□□□□ -0.82
CHFR-222ENST00000544093 PRO2289Q9P1D8 64 aa9.92□□□□□ -0.82
CHFR-222ENST00000544093 SPTSSBQ8NFR3 76 aa9.91□□□□□ -0.82
CHFR-222ENST00000544093 M0QZ58 72 aa9.89□□□□□ -0.83
CHFR-222ENST00000544093 KRTAP3-2Q9BYR7 98 aa9.87□□□□□ -0.83
CHFR-222ENST00000544093 PCP4P48539 62 aa9.86□□□□□ -0.83
CHFR-222ENST00000544093 CHKB-CPT1BH3BT56 60 aa9.79□□□□□ -0.84
CHFR-222ENST00000544093 SNURFQ9Y675 71 aa9.78□□□□□ -0.84
CHFR-222ENST00000544093 MT1XP80297 61 aa9.76□□□□□ -0.85
CHFR-222ENST00000544093 NEBP20929 6669 aa9.75□□□□□ -0.85
CHFR-222ENST00000544093 KRTAP5-9P26371 169 aa9.75□□□□□ -0.85
CHFR-222ENST00000544093 SPANXA2-OT1Q8N9U9 137 aa9.75□□□□□ -0.85
CHFR-222ENST00000544093 SERP2Q8N6R1 65 aa9.74□□□□□ -0.85
CHFR-222ENST00000544093 LINC01554Q52M75 96 aa9.71□□□□□ -0.86
CHFR-222ENST00000544093 MUC12Q9UKN1 5478 aa9.66□□□□□ -0.86
CHFR-222ENST00000544093 KRTAP12-2P59991 146 aa9.58□□□□□ -0.88
CHFR-222ENST00000544093 KMT2DO14686 5537 aa9.55□□□□□ -0.88
CHFR-222ENST00000544093 KRTAP8-1Q8IUC2 63 aa9.46□□□□□ -0.9
CHFR-222ENST00000544093 SPRR2FQ96RM1 72 aa9.45□□□□□ -0.9
CHFR-222ENST00000544093 COX7CP15954 63 aa9.44□□□□□ -0.9
CHFR-222ENST00000544093 COA5Q86WW8 74 aa9.42□□□□□ -0.9
CHFR-222ENST00000544093 MDN1Q9NU22 5596 aa9.42□□□□□ -0.9
CHFR-222ENST00000544093 KRTAP20-1Q3LI63 56 aa9.39□□□□□ -0.91
CHFR-222ENST00000544093 SEC61GP60059 68 aa9.33□□□□□ -0.92
CHFR-222ENST00000544093 SPRR2EP22531 72 aa9.3□□□□□ -0.92
CHFR-222ENST00000544093 SPRR2BP35325 72 aa9.3□□□□□ -0.92
CHFR-222ENST00000544093 SPRR2AP35326 72 aa9.3□□□□□ -0.92
CHFR-222ENST00000544093 KRTAP10-12P60413 245 aa9.3□□□□□ -0.92
CHFR-222ENST00000544093 KRTAP10-7P60409 375 aaPredicted RBP9.29□□□□□ -0.92
CHFR-222ENST00000544093 SERP1Q9Y6X1 66 aa9.29□□□□□ -0.92
CHFR-222ENST00000544093 KRTAP13-4Q3LI77 160 aa9.28□□□□□ -0.92
CHFR-222ENST00000544093 H7BZZ5 65 aa9.27□□□□□ -0.93
CHFR-222ENST00000544093 KRTAP4-8A0A0G2JLE6 195 aa9.26□□□□□ -0.93
CHFR-222ENST00000544093 KRTAP4-8Q9BYQ9 185 aa9.26□□□□□ -0.93
CHFR-222ENST00000544093 CAMK2N1Q7Z7J9 78 aa9.21□□□□□ -0.94
CHFR-222ENST00000544093 KRTAP2-3P0C7H8 128 aa9.18□□□□□ -0.94
CHFR-222ENST00000544093 KRTAP2-4Q9BYR9 128 aa9.18□□□□□ -0.94
CHFR-222ENST00000544093 CYSTM1Q9H1C7 97 aa9.18□□□□□ -0.94
CHFR-222ENST00000544093 LCE1AQ5T7P2 110 aa9.17□□□□□ -0.94
CHFR-222ENST00000544093 SVIPQ8NHG7 77 aa9.13□□□□□ -0.95
CHFR-222ENST00000544093 ANAPC13Q9BS18 74 aa9.12□□□□□ -0.95
CHFR-222ENST00000544093 A0A1B0GU33 70 aa9.1□□□□□ -0.95
CHFR-222ENST00000544093 A0A0D9SG42 100 aa9.04□□□□□ -0.96
CHFR-222ENST00000544093 SPATA8Q6RVD6 105 aa9.03□□□□□ -0.96
CHFR-222ENST00000544093 SPRR2DP22532 72 aa9□□□□□ -0.97
CHFR-222ENST00000544093 A0A1B0GU69 56 aa8.98□□□□□ -0.97
CHFR-222ENST00000544093 SPINT4Q6UDR6 99 aa8.95□□□□□ -0.98
CHFR-222ENST00000544093 ATP5EP56381 51 aaPredicted RBP8.91□□□□□ -0.98
CHFR-222ENST00000544093 KRTAP2-2Q9BYT5 123 aa8.9□□□□□ -0.98
CHFR-222ENST00000544093 KRTAP2-1Q9BYU5 128 aa8.9□□□□□ -0.98
CHFR-222ENST00000544093 SMIM26A0A096LP01 95 aa8.88□□□□□ -0.99
CHFR-222ENST00000544093 CCDC179H3BU77 68 aa8.88□□□□□ -0.99
CHFR-222ENST00000544093 KRTAP12-1P59990 96 aa8.88□□□□□ -0.99
CHFR-222ENST00000544093 PRR15LQ9BU68 103 aa8.79□□□□□ -1
CHFR-222ENST00000544093 LCE3BQ5TA77 95 aa8.74□□□□□ -1.01
CHFR-222ENST00000544093 RPS28P62857 69 aaKnown RBP8.72□□□□□ -1.01
CHFR-222ENST00000544093 KRTAP19-7Q3SYF9 63 aa8.72□□□□□ -1.01
CHFR-222ENST00000544093 A8MU10 97 aa8.69□□□□□ -1.02
CHFR-222ENST00000544093 MT1EP04732 61 aa8.65□□□□□ -1.02
CHFR-222ENST00000544093 TMEM258P61165 79 aa8.65□□□□□ -1.02
CHFR-222ENST00000544093 LINC01558Q9Y6Z2 57 aa8.64□□□□□ -1.03
CHFR-222ENST00000544093 LCE5AQ5TCM9 118 aa8.6□□□□□ -1.03
CHFR-222ENST00000544093 KRTAP19-3Q7Z4W3 81 aa8.6□□□□□ -1.03
CHFR-222ENST00000544093 TNP1P09430 55 aa8.51□□□□□ -1.05
CHFR-222ENST00000544093 KRTAP19-5Q3LI72 72 aa8.51□□□□□ -1.05
CHFR-222ENST00000544093 C10orf95Q9H7T3 257 aa8.47□□□□□ -1.05
CHFR-222ENST00000544093 UQCR11O14957 56 aa8.46□□□□□ -1.06
CHFR-222ENST00000544093 MT1GP13640 62 aa8.43□□□□□ -1.06
CHFR-222ENST00000544093 DSTQ03001 7570 aaKnown RBP8.42□□□□□ -1.06
CHFR-222ENST00000544093 PP632Q6XCG6 107 aa8.41□□□□□ -1.06
CHFR-222ENST00000544093 LCE3AQ5TA76 89 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms