RNA–Protein interactions for RNA: ENST00000544085.5

AFF1-211, Transcript of AF4/FMR2 family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF1, Length 3,644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-211ENST00000544085 HSPG2P98160 4391 aa4.59□□□□□ -1.67
AFF1-211ENST00000544085 UQCR11O14957 56 aa4.59□□□□□ -1.68
AFF1-211ENST00000544085 KRTAP15-1Q3LI76 137 aa4.55□□□□□ -1.68
AFF1-211ENST00000544085 KRTAP17-1Q9BYP8 105 aa4.55□□□□□ -1.68
AFF1-211ENST00000544085 Q5W150 140 aa4.54□□□□□ -1.68
AFF1-211ENST00000544085 DMAC1Q96GE9 116 aa4.54□□□□□ -1.68
AFF1-211ENST00000544085 MT1HL1P0DM35 61 aa4.52□□□□□ -1.69
AFF1-211ENST00000544085 KIAA1109Q2LD37 5005 aa4.52□□□□□ -1.69
AFF1-211ENST00000544085 EPPK1P58107 5090 aaKnown RBP4.51□□□□□ -1.69
AFF1-211ENST00000544085 FAT3Q8TDW7 4589 aa4.48□□□□□ -1.69
AFF1-211ENST00000544085 BIRC6Q9NR09 4857 aa4.47□□□□□ -1.69
AFF1-211ENST00000544085 C9orf92A6NGG3 77 aa4.47□□□□□ -1.69
AFF1-211ENST00000544085 KRTAP4-5Q9BYR2 181 aa4.47□□□□□ -1.69
AFF1-211ENST00000544085 TNXBP22105 4242 aa4.45□□□□□ -1.7
AFF1-211ENST00000544085 KRTAP13-3Q3SY46 172 aa4.45□□□□□ -1.7
AFF1-211ENST00000544085 DMBT1Q9UGM3 2413 aaPredicted RBP4.44□□□□□ -1.7
AFF1-211ENST00000544085 IGKV2-30P06310 120 aa4.41□□□□□ -1.7
AFF1-211ENST00000544085 LRP1Q07954 4544 aaKnown RBP4.41□□□□□ -1.7
AFF1-211ENST00000544085 HERC2O95714 4834 aa4.4□□□□□ -1.7
AFF1-211ENST00000544085 TPRXLQ17RH7 258 aa4.39□□□□□ -1.71
AFF1-211ENST00000544085 RPL37P61927 97 aaKnown RBP4.38□□□□□ -1.71
AFF1-211ENST00000544085 IGKV2D-30A0A075B6S6 120 aa4.38□□□□□ -1.71
AFF1-211ENST00000544085 ACYP2P14621 99 aa4.37□□□□□ -1.71
AFF1-211ENST00000544085 XP32Q5T750 250 aa4.37□□□□□ -1.71
AFF1-211ENST00000544085 LCE2BO14633 110 aa4.34□□□□□ -1.71
AFF1-211ENST00000544085 CAMK2N1Q7Z7J9 78 aa4.34□□□□□ -1.72
AFF1-211ENST00000544085 MYCBP2O75592 4640 aa4.32□□□□□ -1.72
AFF1-211ENST00000544085 ABCA13Q86UQ4 5058 aa4.31□□□□□ -1.72
AFF1-211ENST00000544085 H0YAA0 97 aa4.27□□□□□ -1.73
AFF1-211ENST00000544085 C10orf95Q9H7T3 257 aa4.25□□□□□ -1.73
AFF1-211ENST00000544085 COX6B2Q6YFQ2 88 aa4.23□□□□□ -1.73
AFF1-211ENST00000544085 A0A1B0GU33 70 aa4.18□□□□□ -1.74
AFF1-211ENST00000544085 PCLOQ9Y6V0 5065 aa4.16□□□□□ -1.74
AFF1-211ENST00000544085 KRTAP3-1Q9BYR8 98 aa4.15□□□□□ -1.75
AFF1-211ENST00000544085 H1FX-AS1Q4G0G2 97 aa4.13□□□□□ -1.75
AFF1-211ENST00000544085 LCE2AQ5TA79 106 aaPredicted RBP4.13□□□□□ -1.75
AFF1-211ENST00000544085 MUC17Q685J3 4493 aa4.12□□□□□ -1.75
AFF1-211ENST00000544085 S4R3F8 94 aa4.1□□□□□ -1.75
AFF1-211ENST00000544085 LRP2P98164 4655 aa4.08□□□□□ -1.76
AFF1-211ENST00000544085 KRTAP23-1A1A580 65 aa4.07□□□□□ -1.76
AFF1-211ENST00000544085 R4GN34 69 aa4.07□□□□□ -1.76
AFF1-211ENST00000544085 HERC1Q15751 4861 aa4.07□□□□□ -1.76
AFF1-211ENST00000544085 LPAP08519 4548 aa4.07□□□□□ -1.76
AFF1-211ENST00000544085 KRTAP4-1Q9BYQ7 146 aa4.05□□□□□ -1.76
AFF1-211ENST00000544085 PRO2289Q9P1D8 64 aa4.05□□□□□ -1.76
AFF1-211ENST00000544085 HMCN2Q8NDA2 5059 aa4.04□□□□□ -1.76
AFF1-211ENST00000544085 LOC100996750A0A140TA64 210 aa3.99□□□□□ -1.77
AFF1-211ENST00000544085 KRTAP4-6Q9BYQ5 205 aa3.99□□□□□ -1.77
AFF1-211ENST00000544085 PLAC4Q8WY50 150 aa3.96□□□□□ -1.78
AFF1-211ENST00000544085 KRTAP19-2Q3LHN2 52 aa3.95□□□□□ -1.78
AFF1-211ENST00000544085 LCE2CQ5TA81 110 aa3.95□□□□□ -1.78
AFF1-211ENST00000544085 A0A0D9SG42 100 aa3.88□□□□□ -1.79
AFF1-211ENST00000544085 KRTAP10-6P60371 365 aaPredicted RBP3.87□□□□□ -1.79
AFF1-211ENST00000544085 LORP23490 312 aaPredicted RBP3.87□□□□□ -1.79
AFF1-211ENST00000544085 FLGP20930 4061 aaPredicted RBP3.85□□□□□ -1.79
AFF1-211ENST00000544085 RNF213Q63HN8 5207 aa3.84□□□□□ -1.79
AFF1-211ENST00000544085 M0QZ58 72 aa3.83□□□□□ -1.8
AFF1-211ENST00000544085 M0R2T5 61 aa3.83□□□□□ -1.8
AFF1-211ENST00000544085 MT1HP80294 61 aa3.8□□□□□ -1.8
AFF1-211ENST00000544085 KRTAP13-4Q3LI77 160 aa3.78□□□□□ -1.8
AFF1-211ENST00000544085 UBR4Q5T4S7 5183 aa3.77□□□□□ -1.81
AFF1-211ENST00000544085 MUC2Q02817 5179 aa3.73□□□□□ -1.81
AFF1-211ENST00000544085 INE1O15225 51 aa3.71□□□□□ -1.82
AFF1-211ENST00000544085 KRTAP12-2P59991 146 aa3.71□□□□□ -1.82
AFF1-211ENST00000544085 FAT4Q6V0I7 4981 aa3.7□□□□□ -1.82
AFF1-211ENST00000544085 KRTAP10-10P60014 251 aa3.67□□□□□ -1.82
AFF1-211ENST00000544085 MT2AP02795 61 aa3.67□□□□□ -1.82
AFF1-211ENST00000544085 KRTAP9-8Q9BYQ0 159 aa3.65□□□□□ -1.82
AFF1-211ENST00000544085 KRTAP12-1P59990 96 aa3.64□□□□□ -1.83
AFF1-211ENST00000544085 MT1FP04733 61 aa3.63□□□□□ -1.83
AFF1-211ENST00000544085 SPRR2GQ9BYE4 73 aa3.63□□□□□ -1.83
AFF1-211ENST00000544085 KRTAP4-8Q9BYQ9 185 aa3.61□□□□□ -1.83
AFF1-211ENST00000544085 KRTAP19-1Q8IUB9 90 aa3.57□□□□□ -1.84
AFF1-211ENST00000544085 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.56□□□□□ -1.84
AFF1-211ENST00000544085 KRTAP19-8Q3LI54 63 aa3.54□□□□□ -1.84
AFF1-211ENST00000544085 KRTAP9-3Q9BYQ3 159 aa3.53□□□□□ -1.84
AFF1-211ENST00000544085 KRTAP9-2Q9BYQ4 174 aa3.53□□□□□ -1.84
AFF1-211ENST00000544085 KRTAP9-6A0A140TA67 174 aa3.5□□□□□ -1.85
AFF1-211ENST00000544085 PP632Q6XCG6 107 aa3.48□□□□□ -1.85
AFF1-211ENST00000544085 SPRR5A0A1B0GTR4 108 aa3.46□□□□□ -1.85
AFF1-211ENST00000544085 MT1BP07438 61 aa3.45□□□□□ -1.86
AFF1-211ENST00000544085 KRTAP4-12Q9BQ66 201 aa3.44□□□□□ -1.86
AFF1-211ENST00000544085 TNP1P09430 55 aa3.4□□□□□ -1.87
AFF1-211ENST00000544085 KRTAP9-9Q9BYP9 154 aa3.37□□□□□ -1.87
AFF1-211ENST00000544085 KRTAP9-4Q9BYQ2 154 aa3.37□□□□□ -1.87
AFF1-211ENST00000544085 MT1XP80297 61 aa3.34□□□□□ -1.88
AFF1-211ENST00000544085 KRTAP10-5P60370 271 aa3.33□□□□□ -1.88
AFF1-211ENST00000544085 KRTAP4-8A0A0G2JLE6 195 aa3.31□□□□□ -1.88
AFF1-211ENST00000544085 FSIP2Q5CZC0 6907 aa3.3□□□□□ -1.88
AFF1-211ENST00000544085 LCE3BQ5TA77 95 aa3.3□□□□□ -1.88
AFF1-211ENST00000544085 USH2AO75445 5202 aa3.25□□□□□ -1.89
AFF1-211ENST00000544085 KRTAP19-6Q3LI70 58 aa3.24□□□□□ -1.89
AFF1-211ENST00000544085 KRTAP10-12P60413 245 aa3.22□□□□□ -1.89
AFF1-211ENST00000544085 KRTAP4-7Q9BYR0 210 aa3.22□□□□□ -1.89
AFF1-211ENST00000544085 KRTAP10-7P60409 375 aaPredicted RBP3.19□□□□□ -1.9
AFF1-211ENST00000544085 LCE3AQ5TA76 89 aa3.19□□□□□ -1.9
AFF1-211ENST00000544085 KRTAP8-1Q8IUC2 63 aa3.15□□□□□ -1.91
AFF1-211ENST00000544085 LCE1DQ5T752 114 aa3.14□□□□□ -1.91
AFF1-211ENST00000544085 SSPOA2VEC9 5147 aa3.14□□□□□ -1.91
AFF1-211ENST00000544085 KRTAP4-9Q9BYQ8 210 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms