RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 FAM236BA0A1B0GV22 79 aa5.9□□□□□ -1.46
TNFRSF1A-215ENST00000543359 KRTAP19-8Q3LI54 63 aa5.9□□□□□ -1.46
TNFRSF1A-215ENST00000543359 A0A087WVE0 104 aa5.89□□□□□ -1.47
TNFRSF1A-215ENST00000543359 TRAV22A0A0B4J277 110 aa5.87□□□□□ -1.47
TNFRSF1A-215ENST00000543359 KRTAP6-3Q3LI67 103 aa5.86□□□□□ -1.47
TNFRSF1A-215ENST00000543359 LOC101927531A0A1B0GV80 90 aa5.85□□□□□ -1.47
TNFRSF1A-215ENST00000543359 ATP5EP2Q5VTU8 51 aa5.84□□□□□ -1.47
TNFRSF1A-215ENST00000543359 KLKP1Q107X0 134 aa5.83□□□□□ -1.48
TNFRSF1A-215ENST00000543359 Q5VV11 94 aa5.83□□□□□ -1.48
TNFRSF1A-215ENST00000543359 LINC00643Q86TS7 51 aa5.83□□□□□ -1.48
TNFRSF1A-215ENST00000543359 UQCRQO14949 82 aa5.81□□□□□ -1.48
TNFRSF1A-215ENST00000543359 IMUPQ9GZP8 106 aa5.81□□□□□ -1.48
TNFRSF1A-215ENST00000543359 HIST1H4AP62805 103 aaKnown RBP5.8□□□□□ -1.48
TNFRSF1A-215ENST00000543359 A6NN06 94 aa5.78□□□□□ -1.48
TNFRSF1A-215ENST00000543359 H0Y9P7 68 aa5.78□□□□□ -1.48
TNFRSF1A-215ENST00000543359 KRTAP10-5P60370 271 aa5.77□□□□□ -1.49
TNFRSF1A-215ENST00000543359 ATOX1O00244 68 aa5.76□□□□□ -1.49
TNFRSF1A-215ENST00000543359 KRTAP4-8Q9BYQ9 185 aa5.75□□□□□ -1.49
TNFRSF1A-215ENST00000543359 CRIPTQ9P021 101 aa5.75□□□□□ -1.49
TNFRSF1A-215ENST00000543359 ANAPC13Q9BS18 74 aa5.74□□□□□ -1.49
TNFRSF1A-215ENST00000543359 H3BS24 57 aa5.73□□□□□ -1.49
TNFRSF1A-215ENST00000543359 H0YAA0 97 aa5.72□□□□□ -1.49
TNFRSF1A-215ENST00000543359 MUC12Q9UKN1 5478 aa5.72□□□□□ -1.49
TNFRSF1A-215ENST00000543359 OCR1Q9BZK8 76 aa5.71□□□□□ -1.5
TNFRSF1A-215ENST00000543359 NDUFC1O43677 76 aa5.7□□□□□ -1.5
TNFRSF1A-215ENST00000543359 A8MUN3 132 aa5.69□□□□□ -1.5
TNFRSF1A-215ENST00000543359 LINC00208Q96KT6 92 aa5.69□□□□□ -1.5
TNFRSF1A-215ENST00000543359 NEBP20929 6669 aa5.67□□□□□ -1.5
TNFRSF1A-215ENST00000543359 CCDC179H3BU77 68 aa5.64□□□□□ -1.51
TNFRSF1A-215ENST00000543359 ADM2Q7Z4H4 148 aa5.63□□□□□ -1.51
TNFRSF1A-215ENST00000543359 MP68P56378 58 aa5.62□□□□□ -1.51
TNFRSF1A-215ENST00000543359 KMT2DO14686 5537 aa5.61□□□□□ -1.51
TNFRSF1A-215ENST00000543359 KRTAP5-9P26371 169 aa5.6□□□□□ -1.51
TNFRSF1A-215ENST00000543359 COX7CP15954 63 aa5.59□□□□□ -1.51
TNFRSF1A-215ENST00000543359 SERP2Q8N6R1 65 aa5.57□□□□□ -1.52
TNFRSF1A-215ENST00000543359 MDN1Q9NU22 5596 aa5.57□□□□□ -1.52
TNFRSF1A-215ENST00000543359 H3BPC8 53 aa5.56□□□□□ -1.52
TNFRSF1A-215ENST00000543359 LCE3BQ5TA77 95 aa5.56□□□□□ -1.52
TNFRSF1A-215ENST00000543359 KRTAP4-12Q9BQ66 201 aa5.56□□□□□ -1.52
TNFRSF1A-215ENST00000543359 P0C880 135 aa5.54□□□□□ -1.52
TNFRSF1A-215ENST00000543359 MT1XP80297 61 aa5.54□□□□□ -1.52
TNFRSF1A-215ENST00000543359 DMAC1Q96GE9 116 aa5.54□□□□□ -1.52
TNFRSF1A-215ENST00000543359 SMIM20Q8N5G0 67 aa5.51□□□□□ -1.53
TNFRSF1A-215ENST00000543359 TRAV7A0A075B6U4 112 aa5.5□□□□□ -1.53
TNFRSF1A-215ENST00000543359 CYSTM1Q9H1C7 97 aa5.46□□□□□ -1.54
TNFRSF1A-215ENST00000543359 R4GN34 69 aa5.46□□□□□ -1.54
TNFRSF1A-215ENST00000543359 PLAC4Q8WY50 150 aa5.45□□□□□ -1.54
TNFRSF1A-215ENST00000543359 PRO2289Q9P1D8 64 aa5.45□□□□□ -1.54
TNFRSF1A-215ENST00000543359 C20orf197Q8N268 126 aa5.43□□□□□ -1.54
TNFRSF1A-215ENST00000543359 M0QZ58 72 aa5.42□□□□□ -1.54
TNFRSF1A-215ENST00000543359 TMEM258P61165 79 aa5.42□□□□□ -1.54
TNFRSF1A-215ENST00000543359 KRTAP20-1Q3LI63 56 aa5.41□□□□□ -1.54
TNFRSF1A-215ENST00000543359 KRTAP12-2P59991 146 aa5.4□□□□□ -1.54
TNFRSF1A-215ENST00000543359 RPS28P62857 69 aaKnown RBP5.4□□□□□ -1.54
TNFRSF1A-215ENST00000543359 H7BZZ5 65 aa5.37□□□□□ -1.55
TNFRSF1A-215ENST00000543359 SPRR2FQ96RM1 72 aa5.37□□□□□ -1.55
TNFRSF1A-215ENST00000543359 ACYP2P14621 99 aa5.36□□□□□ -1.55
TNFRSF1A-215ENST00000543359 KRTAP9-9Q9BYP9 154 aa5.35□□□□□ -1.55
TNFRSF1A-215ENST00000543359 KRTAP9-4Q9BYQ2 154 aa5.35□□□□□ -1.55
TNFRSF1A-215ENST00000543359 KRTAP19-4Q3LI73 84 aa5.33□□□□□ -1.56
TNFRSF1A-215ENST00000543359 LINC01554Q52M75 96 aa5.33□□□□□ -1.56
TNFRSF1A-215ENST00000543359 KRTAP8-1Q8IUC2 63 aa5.33□□□□□ -1.56
TNFRSF1A-215ENST00000543359 SNURFQ9Y675 71 aa5.32□□□□□ -1.56
TNFRSF1A-215ENST00000543359 KRTAP4-8A0A0G2JLE6 195 aa5.31□□□□□ -1.56
TNFRSF1A-215ENST00000543359 KRTAP2-3P0C7H8 128 aa5.28□□□□□ -1.56
TNFRSF1A-215ENST00000543359 SPRR2EP22531 72 aa5.28□□□□□ -1.56
TNFRSF1A-215ENST00000543359 SPRR2BP35325 72 aa5.28□□□□□ -1.56
TNFRSF1A-215ENST00000543359 SPRR2AP35326 72 aa5.28□□□□□ -1.56
TNFRSF1A-215ENST00000543359 ATP5EP56381 51 aaPredicted RBP5.28□□□□□ -1.56
TNFRSF1A-215ENST00000543359 KRTAP2-4Q9BYR9 128 aa5.28□□□□□ -1.56
TNFRSF1A-215ENST00000543359 KRTAP10-7P60409 375 aaPredicted RBP5.27□□□□□ -1.57
TNFRSF1A-215ENST00000543359 LCE1AQ5T7P2 110 aa5.27□□□□□ -1.57
TNFRSF1A-215ENST00000543359 KRTAP10-12P60413 245 aa5.26□□□□□ -1.57
TNFRSF1A-215ENST00000543359 SPTSSBQ8NFR3 76 aa5.26□□□□□ -1.57
TNFRSF1A-215ENST00000543359 SERP1Q9Y6X1 66 aa5.26□□□□□ -1.57
TNFRSF1A-215ENST00000543359 SPANXA2-OT1Q8N9U9 137 aa5.21□□□□□ -1.58
TNFRSF1A-215ENST00000543359 CHKB-CPT1BH3BT56 60 aa5.2□□□□□ -1.58
TNFRSF1A-215ENST00000543359 KRTAP13-4Q3LI77 160 aa5.17□□□□□ -1.58
TNFRSF1A-215ENST00000543359 SMIM26A0A096LP01 95 aa5.16□□□□□ -1.58
TNFRSF1A-215ENST00000543359 LCE1DQ5T752 114 aa5.16□□□□□ -1.58
TNFRSF1A-215ENST00000543359 LCE4AQ5TA78 99 aa5.16□□□□□ -1.58
TNFRSF1A-215ENST00000543359 SPRR2DP22532 72 aa5.11□□□□□ -1.59
TNFRSF1A-215ENST00000543359 KRTAP2-2Q9BYT5 123 aa5.11□□□□□ -1.59
TNFRSF1A-215ENST00000543359 KRTAP2-1Q9BYU5 128 aa5.11□□□□□ -1.59
TNFRSF1A-215ENST00000543359 COA5Q86WW8 74 aa5.06□□□□□ -1.6
TNFRSF1A-215ENST00000543359 SVIPQ8NHG7 77 aa5.05□□□□□ -1.6
TNFRSF1A-215ENST00000543359 KRTAP4-7Q9BYR0 210 aa5.05□□□□□ -1.6
TNFRSF1A-215ENST00000543359 Q1T7F1 81 aa5.02□□□□□ -1.61
TNFRSF1A-215ENST00000543359 CAMK2N1Q7Z7J9 78 aa4.99□□□□□ -1.61
TNFRSF1A-215ENST00000543359 KRTAP4-9Q9BYQ8 210 aa4.98□□□□□ -1.61
TNFRSF1A-215ENST00000543359 KRTAP19-7Q3SYF9 63 aa4.96□□□□□ -1.62
TNFRSF1A-215ENST00000543359 V9GYY9 64 aa4.95□□□□□ -1.62
TNFRSF1A-215ENST00000543359 SPATA8Q6RVD6 105 aa4.94□□□□□ -1.62
TNFRSF1A-215ENST00000543359 A0A0D9SG42 100 aa4.93□□□□□ -1.62
TNFRSF1A-215ENST00000543359 SEC61GP60059 68 aa4.91□□□□□ -1.62
TNFRSF1A-215ENST00000543359 A0A1B0GU33 70 aa4.9□□□□□ -1.63
TNFRSF1A-215ENST00000543359 MT1EP04732 61 aa4.9□□□□□ -1.63
TNFRSF1A-215ENST00000543359 LCE5AQ5TCM9 118 aa4.9□□□□□ -1.63
TNFRSF1A-215ENST00000543359 KRTAP12-1P59990 96 aa4.89□□□□□ -1.63
TNFRSF1A-215ENST00000543359 PRO0628Q9UI54 55 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms