RNA–Protein interactions for RNA: ENST00000543341.6

GTF2H3-212, Transcript of general transcription factor IIH subunit 3, human

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2H3, Length 3,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTF2H3-212	ENST00000543341	RPS29	P62273	56 aa	Known RBP	4.24	□□□□□ -1.73
GTF2H3-212	ENST00000543341		Q5W150	140 aa		4.24	□□□□□ -1.73
GTF2H3-212	ENST00000543341	LINC01554	Q52M75	96 aa		4.23	□□□□□ -1.73
GTF2H3-212	ENST00000543341	ADM2	Q7Z4H4	148 aa		4.23	□□□□□ -1.73
GTF2H3-212	ENST00000543341	MUC17	Q685J3	4493 aa		4.23	□□□□□ -1.73
GTF2H3-212	ENST00000543341	SEC61B	P60468	96 aa	Known RBP	4.22	□□□□□ -1.73
GTF2H3-212	ENST00000543341	SMR3B	P02814	79 aa	Predicted RBP	4.22	□□□□□ -1.73
GTF2H3-212	ENST00000543341	ASB16-AS1	Q495Z4	193 aa		4.2	□□□□□ -1.74
GTF2H3-212	ENST00000543341	DMAC1	Q96GE9	116 aa		4.18	□□□□□ -1.74
GTF2H3-212	ENST00000543341	SSBP3-AS1	Q7Z2R9	100 aa		4.17	□□□□□ -1.74
GTF2H3-212	ENST00000543341	CSAG1	Q6PB30	78 aa		4.16	□□□□□ -1.74
GTF2H3-212	ENST00000543341	SPATA8	Q6RVD6	105 aa		4.16	□□□□□ -1.74
GTF2H3-212	ENST00000543341	HMCN2	Q8NDA2	5059 aa		4.16	□□□□□ -1.74
GTF2H3-212	ENST00000543341		K7ERS5	55 aa		4.1	□□□□□ -1.75
GTF2H3-212	ENST00000543341	HERC1	Q15751	4861 aa		4.09	□□□□□ -1.75
GTF2H3-212	ENST00000543341	KRTAP23-1	A1A580	65 aa		4.07	□□□□□ -1.76
GTF2H3-212	ENST00000543341	KRTAP13-3	Q3SY46	172 aa		4.07	□□□□□ -1.76
GTF2H3-212	ENST00000543341	TYMSOS	Q8TAI1	123 aa		4.07	□□□□□ -1.76
GTF2H3-212	ENST00000543341	LOR	P23490	312 aa	Predicted RBP	4.06	□□□□□ -1.76
GTF2H3-212	ENST00000543341	LINC00304	Q8N9R0	145 aa		4.06	□□□□□ -1.76
GTF2H3-212	ENST00000543341	LPA	P08519	4548 aa		4.05	□□□□□ -1.76
GTF2H3-212	ENST00000543341		A0A1B0GU33	70 aa		4.02	□□□□□ -1.77
GTF2H3-212	ENST00000543341	CRIPT	Q9P021	101 aa		4.01	□□□□□ -1.77
GTF2H3-212	ENST00000543341	C9orf92	A6NGG3	77 aa		4.01	□□□□□ -1.77
GTF2H3-212	ENST00000543341	KRTAP16-1	A8MUX0	517 aa		4.01	□□□□□ -1.77
GTF2H3-212	ENST00000543341	TPRXL	Q17RH7	258 aa		3.99	□□□□□ -1.77
GTF2H3-212	ENST00000543341	KRTAP25-1	Q3LHN0	102 aa		3.97	□□□□□ -1.77
GTF2H3-212	ENST00000543341	XP32	Q5T750	250 aa		3.95	□□□□□ -1.78
GTF2H3-212	ENST00000543341	SPINT4	Q6UDR6	99 aa		3.95	□□□□□ -1.78
GTF2H3-212	ENST00000543341	LRP2	P98164	4655 aa		3.94	□□□□□ -1.78
GTF2H3-212	ENST00000543341	H1FX-AS1	Q4G0G2	97 aa		3.93	□□□□□ -1.78
GTF2H3-212	ENST00000543341	C20orf166-AS1	Q96NR2	134 aa		3.93	□□□□□ -1.78
GTF2H3-212	ENST00000543341		H0YAA0	97 aa		3.93	□□□□□ -1.78
GTF2H3-212	ENST00000543341	ROMO1	P60602	79 aa		3.93	□□□□□ -1.78
GTF2H3-212	ENST00000543341		A8MUU9	505 aa		3.92	□□□□□ -1.78
GTF2H3-212	ENST00000543341	LUZP6	Q538Z0	58 aa		3.92	□□□□□ -1.78
GTF2H3-212	ENST00000543341		A0A0D9SG42	100 aa		3.91	□□□□□ -1.78
GTF2H3-212	ENST00000543341	FLG	P20930	4061 aa	Predicted RBP	3.88	□□□□□ -1.79
GTF2H3-212	ENST00000543341	RPL37	P61927	97 aa	Known RBP	3.86	□□□□□ -1.79
GTF2H3-212	ENST00000543341	KRTAP19-2	Q3LHN2	52 aa		3.85	□□□□□ -1.79
GTF2H3-212	ENST00000543341	UBR4	Q5T4S7	5183 aa		3.85	□□□□□ -1.79
GTF2H3-212	ENST00000543341	COX6B2	Q6YFQ2	88 aa		3.85	□□□□□ -1.79
GTF2H3-212	ENST00000543341	RNF213	Q63HN8	5207 aa		3.84	□□□□□ -1.79
GTF2H3-212	ENST00000543341	KRTAP4-1	Q9BYQ7	146 aa		3.8	□□□□□ -1.8
GTF2H3-212	ENST00000543341	KRTAP3-1	Q9BYR8	98 aa		3.8	□□□□□ -1.8
GTF2H3-212	ENST00000543341	NDUFAF8	A1L188	74 aa		3.78	□□□□□ -1.8
GTF2H3-212	ENST00000543341	MUC2	Q02817	5179 aa		3.76	□□□□□ -1.81
GTF2H3-212	ENST00000543341		P0C880	135 aa		3.76	□□□□□ -1.81
GTF2H3-212	ENST00000543341	C10orf95	Q9H7T3	257 aa		3.75	□□□□□ -1.81
GTF2H3-212	ENST00000543341		S4R3F8	94 aa		3.72	□□□□□ -1.81
GTF2H3-212	ENST00000543341	FAT4	Q6V0I7	4981 aa		3.66	□□□□□ -1.82
GTF2H3-212	ENST00000543341	KRTAP13-4	Q3LI77	160 aa		3.65	□□□□□ -1.82
GTF2H3-212	ENST00000543341	KRTAP10-6	P60371	365 aa	Predicted RBP	3.64	□□□□□ -1.83
GTF2H3-212	ENST00000543341	KRTAP12-2	P59991	146 aa		3.6	□□□□□ -1.83
GTF2H3-212	ENST00000543341	MT1H	P80294	61 aa		3.58	□□□□□ -1.84
GTF2H3-212	ENST00000543341		M0QZ58	72 aa		3.56	□□□□□ -1.84
GTF2H3-212	ENST00000543341	KRTAP15-1	Q3LI76	137 aa		3.56	□□□□□ -1.84
GTF2H3-212	ENST00000543341		R4GN34	69 aa		3.56	□□□□□ -1.84
GTF2H3-212	ENST00000543341	KRTAP12-1	P59990	96 aa		3.55	□□□□□ -1.84
GTF2H3-212	ENST00000543341	PLAC4	Q8WY50	150 aa		3.49	□□□□□ -1.85
GTF2H3-212	ENST00000543341	KRTAP9-8	Q9BYQ0	159 aa		3.48	□□□□□ -1.85
GTF2H3-212	ENST00000543341	CAMK2N1	Q7Z7J9	78 aa		3.47	□□□□□ -1.85
GTF2H3-212	ENST00000543341	FSIP2	Q5CZC0	6907 aa		3.43	□□□□□ -1.86
GTF2H3-212	ENST00000543341	MT2A	P02795	61 aa		3.39	□□□□□ -1.87
GTF2H3-212	ENST00000543341	MT1F	P04733	61 aa		3.36	□□□□□ -1.87
GTF2H3-212	ENST00000543341	KRTAP9-3	Q9BYQ3	159 aa		3.36	□□□□□ -1.87
GTF2H3-212	ENST00000543341		M0R2T5	61 aa		3.36	□□□□□ -1.87
GTF2H3-212	ENST00000543341	LOC100996750	A0A140TA64	210 aa		3.34	□□□□□ -1.87
GTF2H3-212	ENST00000543341	KRTAP4-6	Q9BYQ5	205 aa		3.34	□□□□□ -1.87
GTF2H3-212	ENST00000543341	PP632	Q6XCG6	107 aa		3.34	□□□□□ -1.87
GTF2H3-212	ENST00000543341	SPRR2G	Q9BYE4	73 aa		3.33	□□□□□ -1.88
GTF2H3-212	ENST00000543341	KRTAP9-6	A0A140TA67	174 aa		3.31	□□□□□ -1.88
GTF2H3-212	ENST00000543341	KRTAP19-1	Q8IUB9	90 aa		3.31	□□□□□ -1.88
GTF2H3-212	ENST00000543341	KRTAP19-8	Q3LI54	63 aa		3.29	□□□□□ -1.88
GTF2H3-212	ENST00000543341	TNP1	P09430	55 aa		3.27	□□□□□ -1.89
GTF2H3-212	ENST00000543341	SSPO	A2VEC9	5147 aa		3.24	□□□□□ -1.89
GTF2H3-212	ENST00000543341	USH2A	O75445	5202 aa		3.23	□□□□□ -1.89
GTF2H3-212	ENST00000543341	MT1B	P07438	61 aa		3.21	□□□□□ -1.9
GTF2H3-212	ENST00000543341	KRTAP10-10	P60014	251 aa		3.16	□□□□□ -1.9
GTF2H3-212	ENST00000543341	KRTAP9-2	Q9BYQ4	174 aa		3.16	□□□□□ -1.9
GTF2H3-212	ENST00000543341	KRTAP19-6	Q3LI70	58 aa		3.15	□□□□□ -1.91
GTF2H3-212	ENST00000543341	PRO2289	Q9P1D8	64 aa		3.14	□□□□□ -1.91
GTF2H3-212	ENST00000543341	KRTAP10-5	P60370	271 aa		3.07	□□□□□ -1.92
GTF2H3-212	ENST00000543341	MT1X	P80297	61 aa		3.06	□□□□□ -1.92
GTF2H3-212	ENST00000543341	KRTAP9-4	Q9BYQ2	154 aa		3.06	□□□□□ -1.92
GTF2H3-212	ENST00000543341	SPRR5	A0A1B0GTR4	108 aa		3.04	□□□□□ -1.92
GTF2H3-212	ENST00000543341	LCE5A	Q5TCM9	118 aa		3.04	□□□□□ -1.92
GTF2H3-212	ENST00000543341	LCE4A	Q5TA78	99 aa		3.01	□□□□□ -1.93
GTF2H3-212	ENST00000543341	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.01	□□□□□ -1.93
GTF2H3-212	ENST00000543341	CRCT1	Q9UGL9	99 aa		3.01	□□□□□ -1.93
GTF2H3-212	ENST00000543341	KRTAP19-4	Q3LI73	84 aa		2.99	□□□□□ -1.93
GTF2H3-212	ENST00000543341	KRTAP9-9	Q9BYP9	154 aa		2.98	□□□□□ -1.93
GTF2H3-212	ENST00000543341	KRTAP9-7	A8MTY7	169 aa		2.97	□□□□□ -1.93
GTF2H3-212	ENST00000543341	KRTAP10-12	P60413	245 aa		2.97	□□□□□ -1.93
GTF2H3-212	ENST00000543341	KRTAP4-8	Q9BYQ9	185 aa		2.97	□□□□□ -1.93
GTF2H3-212	ENST00000543341	LCE3A	Q5TA76	89 aa		2.96	□□□□□ -1.94
GTF2H3-212	ENST00000543341	INE1	O15225	51 aa		2.93	□□□□□ -1.94
GTF2H3-212	ENST00000543341	OBSCN	Q5VST9	7968 aa		2.93	□□□□□ -1.94
GTF2H3-212	ENST00000543341	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	2.9	□□□□□ -1.95
GTF2H3-212	ENST00000543341	KRTAP10-7	P60409	375 aa	Predicted RBP	2.87	□□□□□ -1.95

Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms