RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 FAM236BA0A1B0GV22 79 aa8.61□□□□□ -1.03
COPS7A-216ENST00000543170 SMIM20Q8N5G0 67 aa8.6□□□□□ -1.03
COPS7A-216ENST00000543170 LCE2BO14633 110 aa8.57□□□□□ -1.04
COPS7A-216ENST00000543170 KRTAP3-3Q9BYR6 98 aa8.57□□□□□ -1.04
COPS7A-216ENST00000543170 TRAV7A0A075B6U4 112 aa8.55□□□□□ -1.04
COPS7A-216ENST00000543170 SSPOA2VEC9 5147 aa8.52□□□□□ -1.05
COPS7A-216ENST00000543170 NDUFC1O43677 76 aa8.47□□□□□ -1.05
COPS7A-216ENST00000543170 DMAC1Q96GE9 116 aa8.45□□□□□ -1.06
COPS7A-216ENST00000543170 H0YAA0 97 aa8.39□□□□□ -1.07
COPS7A-216ENST00000543170 KRTAP19-1Q8IUB9 90 aa8.36□□□□□ -1.07
COPS7A-216ENST00000543170 SERP2Q8N6R1 65 aa8.36□□□□□ -1.07
COPS7A-216ENST00000543170 SPRR2GQ9BYE4 73 aa8.32□□□□□ -1.08
COPS7A-216ENST00000543170 CRIPTQ9P021 101 aa8.31□□□□□ -1.08
COPS7A-216ENST00000543170 SNURFQ9Y675 71 aa8.3□□□□□ -1.08
COPS7A-216ENST00000543170 ACYP2P14621 99 aa8.28□□□□□ -1.08
COPS7A-216ENST00000543170 C20orf197Q8N268 126 aa8.28□□□□□ -1.08
COPS7A-216ENST00000543170 KRTAP19-6Q3LI70 58 aa8.27□□□□□ -1.09
COPS7A-216ENST00000543170 FCGBPQ9Y6R7 5405 aaPredicted RBP8.27□□□□□ -1.09
COPS7A-216ENST00000543170 SPANXA2-OT1Q8N9U9 137 aa8.24□□□□□ -1.09
COPS7A-216ENST00000543170 KRTAP19-8Q3LI54 63 aa8.23□□□□□ -1.09
COPS7A-216ENST00000543170 ADM2Q7Z4H4 148 aa8.23□□□□□ -1.09
COPS7A-216ENST00000543170 COX7CP15954 63 aa8.2□□□□□ -1.1
COPS7A-216ENST00000543170 Q5VV11 94 aa8.19□□□□□ -1.1
COPS7A-216ENST00000543170 MT1BP07438 61 aa8.17□□□□□ -1.1
COPS7A-216ENST00000543170 SPTSSBQ8NFR3 76 aa8.15□□□□□ -1.1
COPS7A-216ENST00000543170 CHKB-CPT1BH3BT56 60 aa8.11□□□□□ -1.11
COPS7A-216ENST00000543170 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.09□□□□□ -1.11
COPS7A-216ENST00000543170 ANAPC13Q9BS18 74 aa8.08□□□□□ -1.12
COPS7A-216ENST00000543170 P0C880 135 aa8.07□□□□□ -1.12
COPS7A-216ENST00000543170 KRTAP3-2Q9BYR7 98 aa8.06□□□□□ -1.12
COPS7A-216ENST00000543170 R4GN34 69 aa8.02□□□□□ -1.13
COPS7A-216ENST00000543170 H7BZZ5 65 aa8□□□□□ -1.13
COPS7A-216ENST00000543170 MACF1Q9UPN3 7388 aaKnown RBP7.98□□□□□ -1.13
COPS7A-216ENST00000543170 CYSTM1Q9H1C7 97 aa7.97□□□□□ -1.13
COPS7A-216ENST00000543170 A6NN06 94 aa7.96□□□□□ -1.14
COPS7A-216ENST00000543170 M0QZ58 72 aa7.95□□□□□ -1.14
COPS7A-216ENST00000543170 COA5Q86WW8 74 aa7.95□□□□□ -1.14
COPS7A-216ENST00000543170 KRTAP10-5P60370 271 aa7.94□□□□□ -1.14
COPS7A-216ENST00000543170 KRTAP9-7A8MTY7 169 aa7.9□□□□□ -1.14
COPS7A-216ENST00000543170 CCDC179H3BU77 68 aa7.87□□□□□ -1.15
COPS7A-216ENST00000543170 SYNE2Q8WXH0 6885 aaKnown RBP7.83□□□□□ -1.16
COPS7A-216ENST00000543170 PLAC4Q8WY50 150 aa7.83□□□□□ -1.16
COPS7A-216ENST00000543170 LINC01554Q52M75 96 aa7.78□□□□□ -1.16
COPS7A-216ENST00000543170 ATP5EP56381 51 aaPredicted RBP7.76□□□□□ -1.17
COPS7A-216ENST00000543170 PRO2289Q9P1D8 64 aa7.76□□□□□ -1.17
COPS7A-216ENST00000543170 MT1XP80297 61 aa7.72□□□□□ -1.17
COPS7A-216ENST00000543170 SEC61GP60059 68 aa7.71□□□□□ -1.18
COPS7A-216ENST00000543170 SERP1Q9Y6X1 66 aa7.69□□□□□ -1.18
COPS7A-216ENST00000543170 KRTAP6-3Q3LI67 103 aa7.67□□□□□ -1.18
COPS7A-216ENST00000543170 TMEM258P61165 79 aa7.65□□□□□ -1.18
COPS7A-216ENST00000543170 KRTAP13-4Q3LI77 160 aa7.65□□□□□ -1.18
COPS7A-216ENST00000543170 A0A1B0GU33 70 aa7.55□□□□□ -1.2
COPS7A-216ENST00000543170 A0A1B0GU69 56 aa7.54□□□□□ -1.2
COPS7A-216ENST00000543170 KRTAP12-2P59991 146 aa7.53□□□□□ -1.2
COPS7A-216ENST00000543170 SPATA8Q6RVD6 105 aa7.47□□□□□ -1.21
COPS7A-216ENST00000543170 KRTAP5-9P26371 169 aa7.46□□□□□ -1.22
COPS7A-216ENST00000543170 KMT2DO14686 5537 aa7.46□□□□□ -1.22
COPS7A-216ENST00000543170 MUC12Q9UKN1 5478 aa7.44□□□□□ -1.22
COPS7A-216ENST00000543170 PRR15LQ9BU68 103 aa7.42□□□□□ -1.22
COPS7A-216ENST00000543170 A0A0D9SG42 100 aa7.41□□□□□ -1.22
COPS7A-216ENST00000543170 LINC01558Q9Y6Z2 57 aa7.4□□□□□ -1.22
COPS7A-216ENST00000543170 CAMK2N1Q7Z7J9 78 aa7.39□□□□□ -1.23
COPS7A-216ENST00000543170 KRTAP10-7P60409 375 aaPredicted RBP7.36□□□□□ -1.23
COPS7A-216ENST00000543170 KRTAP10-12P60413 245 aa7.36□□□□□ -1.23
COPS7A-216ENST00000543170 NEBP20929 6669 aa7.36□□□□□ -1.23
COPS7A-216ENST00000543170 SMIM26A0A096LP01 95 aa7.35□□□□□ -1.23
COPS7A-216ENST00000543170 KRTAP12-1P59990 96 aa7.32□□□□□ -1.24
COPS7A-216ENST00000543170 KRTAP8-1Q8IUC2 63 aa7.32□□□□□ -1.24
COPS7A-216ENST00000543170 SPINT4Q6UDR6 99 aa7.31□□□□□ -1.24
COPS7A-216ENST00000543170 PCP4P48539 62 aa7.27□□□□□ -1.25
COPS7A-216ENST00000543170 MDN1Q9NU22 5596 aa7.27□□□□□ -1.25
COPS7A-216ENST00000543170 KRTAP4-8A0A0G2JLE6 195 aa7.25□□□□□ -1.25
COPS7A-216ENST00000543170 KRTAP4-8Q9BYQ9 185 aa7.25□□□□□ -1.25
COPS7A-216ENST00000543170 A8MU10 97 aa7.24□□□□□ -1.25
COPS7A-216ENST00000543170 SPRR2FQ96RM1 72 aa7.24□□□□□ -1.25
COPS7A-216ENST00000543170 V9GYY9 64 aa7.19□□□□□ -1.26
COPS7A-216ENST00000543170 UQCR11O14957 56 aa7.17□□□□□ -1.26
COPS7A-216ENST00000543170 Q1T7F1 81 aa7.13□□□□□ -1.27
COPS7A-216ENST00000543170 SPRR2EP22531 72 aa7.08□□□□□ -1.28
COPS7A-216ENST00000543170 SPRR2BP35325 72 aa7.08□□□□□ -1.28
COPS7A-216ENST00000543170 SPRR2AP35326 72 aa7.08□□□□□ -1.28
COPS7A-216ENST00000543170 RPS28P62857 69 aaKnown RBP7.06□□□□□ -1.28
COPS7A-216ENST00000543170 PSPHP1O15172 72 aa7.04□□□□□ -1.28
COPS7A-216ENST00000543170 LCE1AQ5T7P2 110 aa7.04□□□□□ -1.28
COPS7A-216ENST00000543170 MIR22HGQ0VDD5 57 aa7.02□□□□□ -1.29
COPS7A-216ENST00000543170 C10orf95Q9H7T3 257 aa6.96□□□□□ -1.3
COPS7A-216ENST00000543170 KRTAP20-1Q3LI63 56 aa6.95□□□□□ -1.3
COPS7A-216ENST00000543170 TNP1P09430 55 aa6.92□□□□□ -1.3
COPS7A-216ENST00000543170 KRTAP19-7Q3SYF9 63 aa6.91□□□□□ -1.3
COPS7A-216ENST00000543170 K7ERS5 55 aa6.86□□□□□ -1.31
COPS7A-216ENST00000543170 A6NED7 52 aa6.85□□□□□ -1.31
COPS7A-216ENST00000543170 KRTAP2-3P0C7H8 128 aa6.85□□□□□ -1.31
COPS7A-216ENST00000543170 KRTAP2-4Q9BYR9 128 aa6.85□□□□□ -1.31
COPS7A-216ENST00000543170 MT1EP04732 61 aa6.84□□□□□ -1.31
COPS7A-216ENST00000543170 SPRR2DP22532 72 aa6.84□□□□□ -1.31
COPS7A-216ENST00000543170 KRTAP19-5Q3LI72 72 aa6.77□□□□□ -1.33
COPS7A-216ENST00000543170 LCE3AQ5TA76 89 aa6.76□□□□□ -1.33
COPS7A-216ENST00000543170 KRTAP19-3Q7Z4W3 81 aa6.73□□□□□ -1.33
COPS7A-216ENST00000543170 LCE5AQ5TCM9 118 aa6.72□□□□□ -1.33
COPS7A-216ENST00000543170 KRTAP25-1Q3LHN0 102 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 284.2 ms