RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 H1FX-AS1Q4G0G2 97 aa2.9□□□□□ -1.95
ABCF1-207ENST00000542772 SPANXA2-OT1Q8N9U9 137 aa2.88□□□□□ -1.95
ABCF1-207ENST00000542772 A8MUN3 132 aa2.86□□□□□ -1.95
ABCF1-207ENST00000542772 V9GYY9 64 aa2.85□□□□□ -1.95
ABCF1-207ENST00000542772 LORP23490 312 aaPredicted RBP2.84□□□□□ -1.95
ABCF1-207ENST00000542772 KRTAP10-6P60371 365 aaPredicted RBP2.84□□□□□ -1.95
ABCF1-207ENST00000542772 KRTAP3-3Q9BYR6 98 aa2.84□□□□□ -1.95
ABCF1-207ENST00000542772 DMAC1Q96GE9 116 aa2.83□□□□□ -1.96
ABCF1-207ENST00000542772 M0R2T5 61 aa2.82□□□□□ -1.96
ABCF1-207ENST00000542772 Q1T7F1 81 aa2.82□□□□□ -1.96
ABCF1-207ENST00000542772 LCA10Q71F78 164 aa2.82□□□□□ -1.96
ABCF1-207ENST00000542772 KRTAP9-8Q9BYQ0 159 aa2.82□□□□□ -1.96
ABCF1-207ENST00000542772 ACYP2P14621 99 aa2.81□□□□□ -1.96
ABCF1-207ENST00000542772 PRO0628Q9UI54 55 aa2.8□□□□□ -1.96
ABCF1-207ENST00000542772 S4R3F8 94 aa2.8□□□□□ -1.96
ABCF1-207ENST00000542772 CSAG1Q6PB30 78 aa2.79□□□□□ -1.96
ABCF1-207ENST00000542772 COA5Q86WW8 74 aa2.78□□□□□ -1.96
ABCF1-207ENST00000542772 BRK1Q8WUW1 75 aa2.78□□□□□ -1.96
ABCF1-207ENST00000542772 MT2AP02795 61 aa2.76□□□□□ -1.97
ABCF1-207ENST00000542772 H0YAA0 97 aa2.75□□□□□ -1.97
ABCF1-207ENST00000542772 LCE2DQ5TA82 110 aaPredicted RBP2.75□□□□□ -1.97
ABCF1-207ENST00000542772 PSPHP1O15172 72 aa2.74□□□□□ -1.97
ABCF1-207ENST00000542772 MT1FP04733 61 aa2.74□□□□□ -1.97
ABCF1-207ENST00000542772 PRR15LQ9BU68 103 aa2.74□□□□□ -1.97
ABCF1-207ENST00000542772 CHKB-CPT1BH3BT56 60 aa2.73□□□□□ -1.97
ABCF1-207ENST00000542772 KRTAP9-3Q9BYQ3 159 aa2.72□□□□□ -1.97
ABCF1-207ENST00000542772 LINC01558Q9Y6Z2 57 aa2.72□□□□□ -1.97
ABCF1-207ENST00000542772 KRTAP10-10P60014 251 aa2.71□□□□□ -1.98
ABCF1-207ENST00000542772 Q5VV11 94 aa2.71□□□□□ -1.98
ABCF1-207ENST00000542772 SPTSSBQ8NFR3 76 aa2.71□□□□□ -1.98
ABCF1-207ENST00000542772 A6NED7 52 aa2.69□□□□□ -1.98
ABCF1-207ENST00000542772 KRTAP3-2Q9BYR7 98 aa2.69□□□□□ -1.98
ABCF1-207ENST00000542772 ADM2Q7Z4H4 148 aa2.67□□□□□ -1.98
ABCF1-207ENST00000542772 SPRR2GQ9BYE4 73 aa2.67□□□□□ -1.98
ABCF1-207ENST00000542772 KRTAP9-2Q9BYQ4 174 aa2.67□□□□□ -1.98
ABCF1-207ENST00000542772 CDC42SE1Q9NRR8 79 aa2.67□□□□□ -1.98
ABCF1-207ENST00000542772 CRIPTQ9P021 101 aa2.67□□□□□ -1.98
ABCF1-207ENST00000542772 LCE2BO14633 110 aa2.66□□□□□ -1.98
ABCF1-207ENST00000542772 KRTAP19-1Q8IUB9 90 aa2.66□□□□□ -1.98
ABCF1-207ENST00000542772 A0A1B0GU69 56 aa2.65□□□□□ -1.99
ABCF1-207ENST00000542772 P0C880 135 aa2.65□□□□□ -1.99
ABCF1-207ENST00000542772 SEC61GP60059 68 aa2.63□□□□□ -1.99
ABCF1-207ENST00000542772 PMAIP1Q13794 54 aa2.63□□□□□ -1.99
ABCF1-207ENST00000542772 KRTAP19-8Q3LI54 63 aa2.63□□□□□ -1.99
ABCF1-207ENST00000542772 UQCR11O14957 56 aa2.61□□□□□ -1.99
ABCF1-207ENST00000542772 M0QZ58 72 aa2.59□□□□□ -1.99
ABCF1-207ENST00000542772 FSIP2Q5CZC0 6907 aa2.58□□□□□ -2
ABCF1-207ENST00000542772 MT1BP07438 61 aa2.58□□□□□ -2
ABCF1-207ENST00000542772 MIR22HGQ0VDD5 57 aa2.58□□□□□ -2
ABCF1-207ENST00000542772 KTN1-AS1Q86SY8 53 aa2.58□□□□□ -2
ABCF1-207ENST00000542772 R4GN34 69 aa2.58□□□□□ -2
ABCF1-207ENST00000542772 A6NN06 94 aa2.57□□□□□ -2
ABCF1-207ENST00000542772 A8MU10 97 aa2.57□□□□□ -2
ABCF1-207ENST00000542772 SPATA8Q6RVD6 105 aa2.57□□□□□ -2
ABCF1-207ENST00000542772 USH2AO75445 5202 aa2.57□□□□□ -2
ABCF1-207ENST00000542772 CRCT1Q9UGL9 99 aa2.56□□□□□ -2
ABCF1-207ENST00000542772 A0A1B0GU33 70 aa2.55□□□□□ -2
ABCF1-207ENST00000542772 KRTAP19-6Q3LI70 58 aa2.55□□□□□ -2
ABCF1-207ENST00000542772 KRTAP13-4Q3LI77 160 aa2.55□□□□□ -2
ABCF1-207ENST00000542772 SSPOA2VEC9 5147 aa2.54□□□□□ -2
ABCF1-207ENST00000542772 KRTAP9-6A0A140TA67 174 aa2.52□□□□□ -2.01
ABCF1-207ENST00000542772 K7ERS5 55 aa2.5□□□□□ -2.01
ABCF1-207ENST00000542772 PLAC4Q8WY50 150 aa2.5□□□□□ -2.01
ABCF1-207ENST00000542772 KRTAP10-5P60370 271 aa2.48□□□□□ -2.01
ABCF1-207ENST00000542772 LINC01554Q52M75 96 aa2.48□□□□□ -2.01
ABCF1-207ENST00000542772 KRTAP12-1P59990 96 aa2.45□□□□□ -2.02
ABCF1-207ENST00000542772 MT1XP80297 61 aa2.45□□□□□ -2.02
ABCF1-207ENST00000542772 FCGBPQ9Y6R7 5405 aaPredicted RBP2.43□□□□□ -2.02
ABCF1-207ENST00000542772 A0A0D9SG42 100 aa2.43□□□□□ -2.02
ABCF1-207ENST00000542772 PRO2289Q9P1D8 64 aa2.43□□□□□ -2.02
ABCF1-207ENST00000542772 KRTAP12-2P59991 146 aa2.42□□□□□ -2.02
ABCF1-207ENST00000542772 SPINT4Q6UDR6 99 aa2.41□□□□□ -2.02
ABCF1-207ENST00000542772 PRAC1Q96KF2 57 aa2.4□□□□□ -2.03
ABCF1-207ENST00000542772 MACF1Q9UPN3 7388 aaKnown RBP2.38□□□□□ -2.03
ABCF1-207ENST00000542772 CAMK2N1Q7Z7J9 78 aa2.38□□□□□ -2.03
ABCF1-207ENST00000542772 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.37□□□□□ -2.03
ABCF1-207ENST00000542772 KRTAP10-12P60413 245 aa2.36□□□□□ -2.03
ABCF1-207ENST00000542772 ROMO1P60602 79 aa2.36□□□□□ -2.03
ABCF1-207ENST00000542772 KRTAP25-1Q3LHN0 102 aa2.35□□□□□ -2.03
ABCF1-207ENST00000542772 KRTAP10-7P60409 375 aaPredicted RBP2.34□□□□□ -2.03
ABCF1-207ENST00000542772 C10orf95Q9H7T3 257 aa2.34□□□□□ -2.03
ABCF1-207ENST00000542772 KRTAP6-3Q3LI67 103 aa2.31□□□□□ -2.04
ABCF1-207ENST00000542772 SYNE2Q8WXH0 6885 aaKnown RBP2.31□□□□□ -2.04
ABCF1-207ENST00000542772 KRTAP4-8A0A0G2JLE6 195 aa2.3□□□□□ -2.04
ABCF1-207ENST00000542772 KRTAP4-8Q9BYQ9 185 aa2.3□□□□□ -2.04
ABCF1-207ENST00000542772 KRTAP9-7A8MTY7 169 aa2.29□□□□□ -2.04
ABCF1-207ENST00000542772 TNP1P09430 55 aa2.28□□□□□ -2.04
ABCF1-207ENST00000542772 KRTAP5-9P26371 169 aa2.28□□□□□ -2.04
ABCF1-207ENST00000542772 KMT2DO14686 5537 aa2.25□□□□□ -2.05
ABCF1-207ENST00000542772 KRTAP8-1Q8IUC2 63 aa2.25□□□□□ -2.05
ABCF1-207ENST00000542772 KRTAP23-1A1A580 65 aa2.22□□□□□ -2.05
ABCF1-207ENST00000542772 KRTAP19-7Q3SYF9 63 aa2.2□□□□□ -2.06
ABCF1-207ENST00000542772 LCE3AQ5TA76 89 aa2.2□□□□□ -2.06
ABCF1-207ENST00000542772 SPRR2FQ96RM1 72 aa2.19□□□□□ -2.06
ABCF1-207ENST00000542772 PP632Q6XCG6 107 aa2.17□□□□□ -2.06
ABCF1-207ENST00000542772 MUC12Q9UKN1 5478 aa2.17□□□□□ -2.06
ABCF1-207ENST00000542772 NEBP20929 6669 aa2.16□□□□□ -2.06
ABCF1-207ENST00000542772 MT1EP04732 61 aa2.16□□□□□ -2.06
ABCF1-207ENST00000542772 KRTAP19-5Q3LI72 72 aa2.16□□□□□ -2.06
ABCF1-207ENST00000542772 LCE1AQ5T7P2 110 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms