RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 H1FX-AS1Q4G0G2 97 aa6.6□□□□□ -1.35
CHFR-221ENST00000542714 RPS28P62857 69 aaKnown RBP6.58□□□□□ -1.36
CHFR-221ENST00000542714 CHKB-CPT1BH3BT56 60 aa6.54□□□□□ -1.36
CHFR-221ENST00000542714 LCE2CQ5TA81 110 aa6.54□□□□□ -1.36
CHFR-221ENST00000542714 S4R3F8 94 aa6.53□□□□□ -1.36
CHFR-221ENST00000542714 MUC2Q02817 5179 aa6.53□□□□□ -1.36
CHFR-221ENST00000542714 LCA10Q71F78 164 aa6.52□□□□□ -1.37
CHFR-221ENST00000542714 SMIM26A0A096LP01 95 aa6.46□□□□□ -1.38
CHFR-221ENST00000542714 SPTSSBQ8NFR3 76 aa6.42□□□□□ -1.38
CHFR-221ENST00000542714 FLGP20930 4061 aaPredicted RBP6.42□□□□□ -1.38
CHFR-221ENST00000542714 MT1HP80294 61 aa6.38□□□□□ -1.39
CHFR-221ENST00000542714 CSAG1Q6PB30 78 aa6.37□□□□□ -1.39
CHFR-221ENST00000542714 Q1T7F1 81 aa6.36□□□□□ -1.39
CHFR-221ENST00000542714 LINC01558Q9Y6Z2 57 aa6.36□□□□□ -1.39
CHFR-221ENST00000542714 FAT4Q6V0I7 4981 aa6.36□□□□□ -1.39
CHFR-221ENST00000542714 LCE2AQ5TA79 106 aaPredicted RBP6.3□□□□□ -1.4
CHFR-221ENST00000542714 V9GYY9 64 aa6.3□□□□□ -1.4
CHFR-221ENST00000542714 PRR15LQ9BU68 103 aa6.28□□□□□ -1.4
CHFR-221ENST00000542714 A0A1B0GU69 56 aa6.25□□□□□ -1.41
CHFR-221ENST00000542714 H0YAA0 97 aa6.25□□□□□ -1.41
CHFR-221ENST00000542714 PSPHP1O15172 72 aa6.25□□□□□ -1.41
CHFR-221ENST00000542714 KRTAP10-6P60371 365 aaPredicted RBP6.25□□□□□ -1.41
CHFR-221ENST00000542714 M0R2T5 61 aa6.23□□□□□ -1.41
CHFR-221ENST00000542714 Q5VV11 94 aa6.23□□□□□ -1.41
CHFR-221ENST00000542714 ADM2Q7Z4H4 148 aa6.23□□□□□ -1.41
CHFR-221ENST00000542714 P0C880 135 aa6.21□□□□□ -1.42
CHFR-221ENST00000542714 SEC61GP60059 68 aa6.2□□□□□ -1.42
CHFR-221ENST00000542714 KRTAP9-8Q9BYQ0 159 aa6.14□□□□□ -1.43
CHFR-221ENST00000542714 LORP23490 312 aaPredicted RBP6.13□□□□□ -1.43
CHFR-221ENST00000542714 MT2AP02795 61 aa6.12□□□□□ -1.43
CHFR-221ENST00000542714 A0A1B0GU33 70 aa6.11□□□□□ -1.43
CHFR-221ENST00000542714 MT1FP04733 61 aa6.09□□□□□ -1.43
CHFR-221ENST00000542714 KRTAP13-4Q3LI77 160 aa6.08□□□□□ -1.44
CHFR-221ENST00000542714 A6NED7 52 aa6.04□□□□□ -1.44
CHFR-221ENST00000542714 UQCR11O14957 56 aa6.03□□□□□ -1.44
CHFR-221ENST00000542714 SPATA8Q6RVD6 105 aa6.03□□□□□ -1.44
CHFR-221ENST00000542714 KRTAP10-10P60014 251 aa6.01□□□□□ -1.45
CHFR-221ENST00000542714 M0QZ58 72 aa5.99□□□□□ -1.45
CHFR-221ENST00000542714 MIR22HGQ0VDD5 57 aa5.98□□□□□ -1.45
CHFR-221ENST00000542714 CRIPTQ9P021 101 aa5.98□□□□□ -1.45
CHFR-221ENST00000542714 A8MU10 97 aa5.97□□□□□ -1.45
CHFR-221ENST00000542714 R4GN34 69 aa5.97□□□□□ -1.45
CHFR-221ENST00000542714 KRTAP19-1Q8IUB9 90 aa5.94□□□□□ -1.46
CHFR-221ENST00000542714 CDC42SE1Q9NRR8 79 aa5.94□□□□□ -1.46
CHFR-221ENST00000542714 SPRR2GQ9BYE4 73 aa5.93□□□□□ -1.46
CHFR-221ENST00000542714 KRTAP9-3Q9BYQ3 159 aa5.93□□□□□ -1.46
CHFR-221ENST00000542714 BRK1Q8WUW1 75 aa5.91□□□□□ -1.46
CHFR-221ENST00000542714 A0A0D9SG42 100 aa5.9□□□□□ -1.46
CHFR-221ENST00000542714 LINC01554Q52M75 96 aa5.87□□□□□ -1.47
CHFR-221ENST00000542714 KRTAP12-1P59990 96 aa5.83□□□□□ -1.48
CHFR-221ENST00000542714 KRTAP19-8Q3LI54 63 aa5.81□□□□□ -1.48
CHFR-221ENST00000542714 KRTAP12-2P59991 146 aa5.8□□□□□ -1.48
CHFR-221ENST00000542714 LOC100996750A0A140TA64 210 aa5.78□□□□□ -1.48
CHFR-221ENST00000542714 A6NN06 94 aa5.78□□□□□ -1.48
CHFR-221ENST00000542714 KRTAP4-6Q9BYQ5 205 aa5.78□□□□□ -1.48
CHFR-221ENST00000542714 MT1BP07438 61 aa5.76□□□□□ -1.49
CHFR-221ENST00000542714 SPINT4Q6UDR6 99 aa5.75□□□□□ -1.49
CHFR-221ENST00000542714 PRO0628Q9UI54 55 aa5.72□□□□□ -1.49
CHFR-221ENST00000542714 K7ERS5 55 aa5.67□□□□□ -1.5
CHFR-221ENST00000542714 PLAC4Q8WY50 150 aa5.65□□□□□ -1.5
CHFR-221ENST00000542714 USH2AO75445 5202 aa5.6□□□□□ -1.51
CHFR-221ENST00000542714 CAMK2N1Q7Z7J9 78 aa5.58□□□□□ -1.52
CHFR-221ENST00000542714 PMAIP1Q13794 54 aa5.57□□□□□ -1.52
CHFR-221ENST00000542714 MT1XP80297 61 aa5.54□□□□□ -1.52
CHFR-221ENST00000542714 C10orf95Q9H7T3 257 aa5.53□□□□□ -1.52
CHFR-221ENST00000542714 KRTAP10-5P60370 271 aa5.52□□□□□ -1.53
CHFR-221ENST00000542714 ROMO1P60602 79 aa5.48□□□□□ -1.53
CHFR-221ENST00000542714 KRTAP9-2Q9BYQ4 174 aa5.48□□□□□ -1.53
CHFR-221ENST00000542714 KRTAP19-6Q3LI70 58 aa5.44□□□□□ -1.54
CHFR-221ENST00000542714 SSPOA2VEC9 5147 aa5.42□□□□□ -1.54
CHFR-221ENST00000542714 PRO2289Q9P1D8 64 aa5.4□□□□□ -1.54
CHFR-221ENST00000542714 KRTAP9-6A0A140TA67 174 aa5.35□□□□□ -1.55
CHFR-221ENST00000542714 KRTAP25-1Q3LHN0 102 aa5.32□□□□□ -1.56
CHFR-221ENST00000542714 KTN1-AS1Q86SY8 53 aa5.32□□□□□ -1.56
CHFR-221ENST00000542714 KRTAP10-7P60409 375 aaPredicted RBP5.31□□□□□ -1.56
CHFR-221ENST00000542714 TNP1P09430 55 aa5.3□□□□□ -1.56
CHFR-221ENST00000542714 SVIPQ8NHG7 77 aa5.3□□□□□ -1.56
CHFR-221ENST00000542714 KRTAP4-8Q9BYQ9 185 aa5.3□□□□□ -1.56
CHFR-221ENST00000542714 PRAC1Q96KF2 57 aa5.29□□□□□ -1.56
CHFR-221ENST00000542714 CRCT1Q9UGL9 99 aa5.27□□□□□ -1.57
CHFR-221ENST00000542714 KRTAP10-12P60413 245 aa5.24□□□□□ -1.57
CHFR-221ENST00000542714 FCGBPQ9Y6R7 5405 aaPredicted RBP5.2□□□□□ -1.58
CHFR-221ENST00000542714 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.17□□□□□ -1.58
CHFR-221ENST00000542714 FSIP2Q5CZC0 6907 aa5.17□□□□□ -1.58
CHFR-221ENST00000542714 LCE3AQ5TA76 89 aa5.16□□□□□ -1.58
CHFR-221ENST00000542714 KRTAP23-1A1A580 65 aa5.13□□□□□ -1.59
CHFR-221ENST00000542714 KRTAP4-8A0A0G2JLE6 195 aa5.12□□□□□ -1.59
CHFR-221ENST00000542714 PP632Q6XCG6 107 aa5.09□□□□□ -1.59
CHFR-221ENST00000542714 KRTAP4-12Q9BQ66 201 aa5.08□□□□□ -1.6
CHFR-221ENST00000542714 LCE3BQ5TA77 95 aa5.04□□□□□ -1.6
CHFR-221ENST00000542714 KRTAP8-1Q8IUC2 63 aa5.04□□□□□ -1.6
CHFR-221ENST00000542714 KMT2DO14686 5537 aa5.01□□□□□ -1.61
CHFR-221ENST00000542714 KRTAP19-5Q3LI72 72 aa4.97□□□□□ -1.61
CHFR-221ENST00000542714 KRTAP19-7Q3SYF9 63 aa4.94□□□□□ -1.62
CHFR-221ENST00000542714 KRTAP12-3P60328 96 aa4.93□□□□□ -1.62
CHFR-221ENST00000542714 KRTAP9-9Q9BYP9 154 aa4.92□□□□□ -1.62
CHFR-221ENST00000542714 KRTAP9-4Q9BYQ2 154 aa4.92□□□□□ -1.62
CHFR-221ENST00000542714 MT1EP04732 61 aa4.86□□□□□ -1.63
CHFR-221ENST00000542714 KRTAP5-9P26371 169 aa4.8□□□□□ -1.64
CHFR-221ENST00000542714 KRTAP15-1Q3LI76 137 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 194.4 ms