RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 H0YAA0 97 aa7.93□□□□□ -1.14
DDX55-209ENST00000542286 KRTAP25-1Q3LHN0 102 aa7.93□□□□□ -1.14
DDX55-209ENST00000542286 EPPK1P58107 5090 aaKnown RBP7.92□□□□□ -1.14
DDX55-209ENST00000542286 C20orf166-AS1Q96NR2 134 aa7.9□□□□□ -1.14
DDX55-209ENST00000542286 Q5VSD8 79 aa7.89□□□□□ -1.15
DDX55-209ENST00000542286 KRTAP3-1Q9BYR8 98 aa7.89□□□□□ -1.15
DDX55-209ENST00000542286 ROMO1P60602 79 aa7.88□□□□□ -1.15
DDX55-209ENST00000542286 LPAP08519 4548 aa7.83□□□□□ -1.16
DDX55-209ENST00000542286 A0A1B0GU33 70 aa7.82□□□□□ -1.16
DDX55-209ENST00000542286 KRTAP10-8P60410 259 aa7.78□□□□□ -1.16
DDX55-209ENST00000542286 CRIPTQ9P021 101 aa7.78□□□□□ -1.16
DDX55-209ENST00000542286 H1FX-AS1Q4G0G2 97 aa7.76□□□□□ -1.17
DDX55-209ENST00000542286 LRP2P98164 4655 aa7.75□□□□□ -1.17
DDX55-209ENST00000542286 ABCA13Q86UQ4 5058 aa7.75□□□□□ -1.17
DDX55-209ENST00000542286 K7ERS5 55 aa7.67□□□□□ -1.18
DDX55-209ENST00000542286 XP32Q5T750 250 aa7.67□□□□□ -1.18
DDX55-209ENST00000542286 P0C880 135 aa7.67□□□□□ -1.18
DDX55-209ENST00000542286 COX6B2Q6YFQ2 88 aa7.65□□□□□ -1.18
DDX55-209ENST00000542286 MT1HL1P0DM35 61 aa7.65□□□□□ -1.19
DDX55-209ENST00000542286 RPL37P61927 97 aaKnown RBP7.61□□□□□ -1.19
DDX55-209ENST00000542286 KRTAP4-5Q9BYR2 181 aa7.59□□□□□ -1.19
DDX55-209ENST00000542286 KRTAP3-3Q9BYR6 98 aa7.54□□□□□ -1.2
DDX55-209ENST00000542286 SPINT4Q6UDR6 99 aa7.49□□□□□ -1.21
DDX55-209ENST00000542286 TPRXLQ17RH7 258 aa7.47□□□□□ -1.21
DDX55-209ENST00000542286 A0A0D9SG42 100 aa7.44□□□□□ -1.22
DDX55-209ENST00000542286 KRTAP10-6P60371 365 aaPredicted RBP7.42□□□□□ -1.22
DDX55-209ENST00000542286 KRTAP13-4Q3LI77 160 aa7.42□□□□□ -1.22
DDX55-209ENST00000542286 S4R3F8 94 aa7.42□□□□□ -1.22
DDX55-209ENST00000542286 HERC2O95714 4834 aa7.41□□□□□ -1.22
DDX55-209ENST00000542286 C10orf95Q9H7T3 257 aa7.4□□□□□ -1.23
DDX55-209ENST00000542286 KRTAP3-2Q9BYR7 98 aa7.38□□□□□ -1.23
DDX55-209ENST00000542286 MUC2Q02817 5179 aa7.37□□□□□ -1.23
DDX55-209ENST00000542286 NDUFAF8A1L188 74 aa7.36□□□□□ -1.23
DDX55-209ENST00000542286 KRTAP15-1Q3LI76 137 aa7.33□□□□□ -1.24
DDX55-209ENST00000542286 MUC17Q685J3 4493 aa7.26□□□□□ -1.25
DDX55-209ENST00000542286 KRTAP12-2P59991 146 aa7.21□□□□□ -1.26
DDX55-209ENST00000542286 HERC1Q15751 4861 aa7.21□□□□□ -1.26
DDX55-209ENST00000542286 KRTAP4-1Q9BYQ7 146 aa7.2□□□□□ -1.26
DDX55-209ENST00000542286 J3QL48 77 aa7.17□□□□□ -1.26
DDX55-209ENST00000542286 PCLOQ9Y6V0 5065 aa7.13□□□□□ -1.27
DDX55-209ENST00000542286 KRTAP12-1P59990 96 aa7.11□□□□□ -1.27
DDX55-209ENST00000542286 BIRC6Q9NR09 4857 aa7.1□□□□□ -1.27
DDX55-209ENST00000542286 LORP23490 312 aaPredicted RBP7.03□□□□□ -1.28
DDX55-209ENST00000542286 SEC61BP60468 96 aaKnown RBP7.03□□□□□ -1.28
DDX55-209ENST00000542286 FAT4Q6V0I7 4981 aa7.01□□□□□ -1.29
DDX55-209ENST00000542286 M0QZ58 72 aa6.98□□□□□ -1.29
DDX55-209ENST00000542286 HMCN2Q8NDA2 5059 aa6.94□□□□□ -1.3
DDX55-209ENST00000542286 RNF213Q63HN8 5207 aa6.93□□□□□ -1.3
DDX55-209ENST00000542286 KRTAP19-2Q3LHN2 52 aa6.92□□□□□ -1.3
DDX55-209ENST00000542286 R4GN34 69 aa6.91□□□□□ -1.3
DDX55-209ENST00000542286 FLGP20930 4061 aaPredicted RBP6.85□□□□□ -1.31
DDX55-209ENST00000542286 UBR4Q5T4S7 5183 aa6.84□□□□□ -1.31
DDX55-209ENST00000542286 A0A0A0MQY5 61 aa6.83□□□□□ -1.32
DDX55-209ENST00000542286 PLAC4Q8WY50 150 aa6.82□□□□□ -1.32
DDX55-209ENST00000542286 LUZP6Q538Z0 58 aa6.76□□□□□ -1.33
DDX55-209ENST00000542286 LCE2CQ5TA81 110 aa6.59□□□□□ -1.35
DDX55-209ENST00000542286 CAMK2N1Q7Z7J9 78 aa6.57□□□□□ -1.36
DDX55-209ENST00000542286 PP632Q6XCG6 107 aa6.51□□□□□ -1.37
DDX55-209ENST00000542286 M0R2T5 61 aa6.49□□□□□ -1.37
DDX55-209ENST00000542286 MT1HP80294 61 aa6.41□□□□□ -1.38
DDX55-209ENST00000542286 KRTAP19-1Q8IUB9 90 aa6.35□□□□□ -1.39
DDX55-209ENST00000542286 MT1FP04733 61 aa6.33□□□□□ -1.4
DDX55-209ENST00000542286 KRTAP10-10P60014 251 aa6.3□□□□□ -1.4
DDX55-209ENST00000542286 MT2AP02795 61 aa6.29□□□□□ -1.4
DDX55-209ENST00000542286 SPRR2GQ9BYE4 73 aa6.26□□□□□ -1.41
DDX55-209ENST00000542286 KRTAP9-8Q9BYQ0 159 aa6.24□□□□□ -1.41
DDX55-209ENST00000542286 SPRR5A0A1B0GTR4 108 aa6.23□□□□□ -1.41
DDX55-209ENST00000542286 TNP1P09430 55 aa6.22□□□□□ -1.41
DDX55-209ENST00000542286 USH2AO75445 5202 aa6.17□□□□□ -1.42
DDX55-209ENST00000542286 KRTAP23-1A1A580 65 aa6.15□□□□□ -1.42
DDX55-209ENST00000542286 MT1BP07438 61 aa6.04□□□□□ -1.44
DDX55-209ENST00000542286 LCE3AQ5TA76 89 aa6.04□□□□□ -1.44
DDX55-209ENST00000542286 KRTAP19-8Q3LI54 63 aa5.98□□□□□ -1.45
DDX55-209ENST00000542286 KMT2DO14686 5537 aa5.97□□□□□ -1.45
DDX55-209ENST00000542286 KRTAP10-5P60370 271 aa5.97□□□□□ -1.45
DDX55-209ENST00000542286 MT1XP80297 61 aa5.97□□□□□ -1.45
DDX55-209ENST00000542286 PRO2289Q9P1D8 64 aa5.97□□□□□ -1.45
DDX55-209ENST00000542286 KRTAP9-3Q9BYQ3 159 aa5.96□□□□□ -1.45
DDX55-209ENST00000542286 KRTAP10-7P60409 375 aaPredicted RBP5.87□□□□□ -1.47
DDX55-209ENST00000542286 LCE2BO14633 110 aa5.84□□□□□ -1.48
DDX55-209ENST00000542286 INE1O15225 51 aa5.82□□□□□ -1.48
DDX55-209ENST00000542286 KRTAP10-12P60413 245 aa5.78□□□□□ -1.48
DDX55-209ENST00000542286 FSIP2Q5CZC0 6907 aa5.77□□□□□ -1.49
DDX55-209ENST00000542286 KRTAP8-1Q8IUC2 63 aa5.73□□□□□ -1.49
DDX55-209ENST00000542286 LCE2AQ5TA79 106 aaPredicted RBP5.71□□□□□ -1.5
DDX55-209ENST00000542286 KRTAP12-3P60328 96 aa5.69□□□□□ -1.5
DDX55-209ENST00000542286 KRTAP4-8A0A0G2JLE6 195 aa5.63□□□□□ -1.51
DDX55-209ENST00000542286 KRTAP4-8Q9BYQ9 185 aa5.63□□□□□ -1.51
DDX55-209ENST00000542286 SSPOA2VEC9 5147 aa5.58□□□□□ -1.52
DDX55-209ENST00000542286 KRTAP19-5Q3LI72 72 aa5.57□□□□□ -1.52
DDX55-209ENST00000542286 KRTAP4-7Q9BYR0 210 aa5.37□□□□□ -1.55
DDX55-209ENST00000542286 KRTAP19-7Q3SYF9 63 aa5.33□□□□□ -1.56
DDX55-209ENST00000542286 LCE3CQ5T5A8 94 aa5.33□□□□□ -1.56
DDX55-209ENST00000542286 FCGBPQ9Y6R7 5405 aaPredicted RBP5.31□□□□□ -1.56
DDX55-209ENST00000542286 MUC12Q9UKN1 5478 aa5.29□□□□□ -1.56
DDX55-209ENST00000542286 KRTAP9-6A8MVA2 160 aa5.27□□□□□ -1.57
DDX55-209ENST00000542286 MT1EP04732 61 aa5.15□□□□□ -1.58
DDX55-209ENST00000542286 MT1LQ93083 61 aa5.13□□□□□ -1.59
DDX55-209ENST00000542286 DSTQ03001 7570 aaKnown RBP5.12□□□□□ -1.59
DDX55-209ENST00000542286 KRTAP19-6Q3LI70 58 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms