RNA–Protein interactions for RNA: ENST00000541836.5

NPIPA1-206, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 5

Gene NPIPA1, Length 2,747 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-206ENST00000541836 FAT1Q14517 4588 aa7.12□□□□□ -1.27
NPIPA1-206ENST00000541836 KRTAP10-6P60371 365 aaPredicted RBP7.12□□□□□ -1.27
NPIPA1-206ENST00000541836 TPRXLQ17RH7 258 aa7.12□□□□□ -1.27
NPIPA1-206ENST00000541836 C10orf95Q9H7T3 257 aa7.07□□□□□ -1.28
NPIPA1-206ENST00000541836 KRTAP3-3Q9BYR6 98 aa7.06□□□□□ -1.28
NPIPA1-206ENST00000541836 PKHD1L1Q86WI1 4243 aa7.06□□□□□ -1.28
NPIPA1-206ENST00000541836 RYR2Q92736 4967 aa7.05□□□□□ -1.28
NPIPA1-206ENST00000541836 NDUFAF8A1L188 74 aa7.05□□□□□ -1.28
NPIPA1-206ENST00000541836 A0A1B0GVY2 172 aa7.03□□□□□ -1.28
NPIPA1-206ENST00000541836 KRTAP3-2Q9BYR7 98 aa7.03□□□□□ -1.28
NPIPA1-206ENST00000541836 APOBP04114 4563 aaKnown RBP7.02□□□□□ -1.29
NPIPA1-206ENST00000541836 KMT2CQ8NEZ4 4911 aaKnown RBP7.01□□□□□ -1.29
NPIPA1-206ENST00000541836 KRTAP10-4P60372 401 aaPredicted RBP6.96□□□□□ -1.29
NPIPA1-206ENST00000541836 S4R3F8 94 aa6.96□□□□□ -1.3
NPIPA1-206ENST00000541836 KRTAP15-1Q3LI76 137 aa6.94□□□□□ -1.3
NPIPA1-206ENST00000541836 KRTAP12-2P59991 146 aa6.92□□□□□ -1.3
NPIPA1-206ENST00000541836 KRTAP10-8P60410 259 aa6.92□□□□□ -1.3
NPIPA1-206ENST00000541836 RYR3Q15413 4870 aa6.9□□□□□ -1.31
NPIPA1-206ENST00000541836 HSPG2P98160 4391 aa6.89□□□□□ -1.31
NPIPA1-206ENST00000541836 LRP1Q07954 4544 aaKnown RBP6.88□□□□□ -1.31
NPIPA1-206ENST00000541836 FAT3Q8TDW7 4589 aa6.83□□□□□ -1.32
NPIPA1-206ENST00000541836 KRTAP12-1P59990 96 aa6.83□□□□□ -1.32
NPIPA1-206ENST00000541836 MYCBP2O75592 4640 aa6.81□□□□□ -1.32
NPIPA1-206ENST00000541836 Q5VSD8 79 aa6.8□□□□□ -1.32
NPIPA1-206ENST00000541836 TNXBP22105 4242 aa6.78□□□□□ -1.32
NPIPA1-206ENST00000541836 XP32Q5T750 250 aa6.78□□□□□ -1.32
NPIPA1-206ENST00000541836 KRTAP17-1Q9BYP8 105 aa6.72□□□□□ -1.33
NPIPA1-206ENST00000541836 J3QL48 77 aa6.68□□□□□ -1.34
NPIPA1-206ENST00000541836 M0QZ58 72 aa6.68□□□□□ -1.34
NPIPA1-206ENST00000541836 KIAA1109Q2LD37 5005 aa6.65□□□□□ -1.34
NPIPA1-206ENST00000541836 EPPK1P58107 5090 aaKnown RBP6.65□□□□□ -1.35
NPIPA1-206ENST00000541836 LUZP6Q538Z0 58 aa6.63□□□□□ -1.35
NPIPA1-206ENST00000541836 RYR1P21817 5038 aa6.63□□□□□ -1.35
NPIPA1-206ENST00000541836 LPAP08519 4548 aa6.62□□□□□ -1.35
NPIPA1-206ENST00000541836 MT1HL1P0DM35 61 aa6.52□□□□□ -1.37
NPIPA1-206ENST00000541836 R4GN34 69 aa6.51□□□□□ -1.37
NPIPA1-206ENST00000541836 LRP2P98164 4655 aa6.51□□□□□ -1.37
NPIPA1-206ENST00000541836 PLAC4Q8WY50 150 aa6.49□□□□□ -1.37
NPIPA1-206ENST00000541836 BIRC6Q9NR09 4857 aa6.49□□□□□ -1.37
NPIPA1-206ENST00000541836 KRTAP4-5Q9BYR2 181 aa6.44□□□□□ -1.38
NPIPA1-206ENST00000541836 ABCA13Q86UQ4 5058 aa6.41□□□□□ -1.38
NPIPA1-206ENST00000541836 SEC61BP60468 96 aaKnown RBP6.39□□□□□ -1.39
NPIPA1-206ENST00000541836 HERC2O95714 4834 aa6.38□□□□□ -1.39
NPIPA1-206ENST00000541836 LORP23490 312 aaPredicted RBP6.36□□□□□ -1.39
NPIPA1-206ENST00000541836 PP632Q6XCG6 107 aa6.24□□□□□ -1.41
NPIPA1-206ENST00000541836 CAMK2N1Q7Z7J9 78 aa6.24□□□□□ -1.41
NPIPA1-206ENST00000541836 MUC2Q02817 5179 aa6.14□□□□□ -1.43
NPIPA1-206ENST00000541836 MUC17Q685J3 4493 aa6.14□□□□□ -1.43
NPIPA1-206ENST00000541836 KRTAP4-1Q9BYQ7 146 aa6.12□□□□□ -1.43
NPIPA1-206ENST00000541836 PCLOQ9Y6V0 5065 aa6.12□□□□□ -1.43
NPIPA1-206ENST00000541836 TNP1P09430 55 aa6□□□□□ -1.45
NPIPA1-206ENST00000541836 KRTAP19-2Q3LHN2 52 aa5.97□□□□□ -1.45
NPIPA1-206ENST00000541836 HERC1Q15751 4861 aa5.94□□□□□ -1.46
NPIPA1-206ENST00000541836 SPRR5A0A1B0GTR4 108 aa5.93□□□□□ -1.46
NPIPA1-206ENST00000541836 KRTAP23-1A1A580 65 aa5.89□□□□□ -1.47
NPIPA1-206ENST00000541836 HMCN2Q8NDA2 5059 aa5.86□□□□□ -1.47
NPIPA1-206ENST00000541836 FLGP20930 4061 aaPredicted RBP5.84□□□□□ -1.48
NPIPA1-206ENST00000541836 FAT4Q6V0I7 4981 aa5.83□□□□□ -1.48
NPIPA1-206ENST00000541836 PRO2289Q9P1D8 64 aa5.79□□□□□ -1.48
NPIPA1-206ENST00000541836 RNF213Q63HN8 5207 aa5.75□□□□□ -1.49
NPIPA1-206ENST00000541836 LCE3AQ5TA76 89 aa5.66□□□□□ -1.5
NPIPA1-206ENST00000541836 LCE2DQ5TA82 110 aaPredicted RBP5.64□□□□□ -1.51
NPIPA1-206ENST00000541836 UBR4Q5T4S7 5183 aa5.63□□□□□ -1.51
NPIPA1-206ENST00000541836 M0R2T5 61 aa5.61□□□□□ -1.51
NPIPA1-206ENST00000541836 LCE2CQ5TA81 110 aa5.61□□□□□ -1.51
NPIPA1-206ENST00000541836 SPRR2GQ9BYE4 73 aa5.61□□□□□ -1.51
NPIPA1-206ENST00000541836 KRTAP19-1Q8IUB9 90 aa5.59□□□□□ -1.51
NPIPA1-206ENST00000541836 INE1O15225 51 aa5.58□□□□□ -1.52
NPIPA1-206ENST00000541836 MT1HP80294 61 aa5.48□□□□□ -1.53
NPIPA1-206ENST00000541836 KRTAP8-1Q8IUC2 63 aa5.47□□□□□ -1.53
NPIPA1-206ENST00000541836 KRTAP10-10P60014 251 aa5.41□□□□□ -1.54
NPIPA1-206ENST00000541836 MT1FP04733 61 aa5.38□□□□□ -1.55
NPIPA1-206ENST00000541836 KRTAP12-3P60328 96 aa5.37□□□□□ -1.55
NPIPA1-206ENST00000541836 MT2AP02795 61 aa5.35□□□□□ -1.55
NPIPA1-206ENST00000541836 KRTAP9-8Q9BYQ0 159 aa5.32□□□□□ -1.56
NPIPA1-206ENST00000541836 KRTAP10-5P60370 271 aa5.31□□□□□ -1.56
NPIPA1-206ENST00000541836 KRTAP10-12P60413 245 aa5.31□□□□□ -1.56
NPIPA1-206ENST00000541836 MT1XP80297 61 aa5.29□□□□□ -1.56
NPIPA1-206ENST00000541836 KRTAP19-8Q3LI54 63 aa5.28□□□□□ -1.56
NPIPA1-206ENST00000541836 MT1BP07438 61 aa5.25□□□□□ -1.57
NPIPA1-206ENST00000541836 KRTAP10-7P60409 375 aaPredicted RBP5.21□□□□□ -1.58
NPIPA1-206ENST00000541836 LCE2AQ5TA79 106 aaPredicted RBP5.18□□□□□ -1.58
NPIPA1-206ENST00000541836 USH2AO75445 5202 aa5.16□□□□□ -1.58
NPIPA1-206ENST00000541836 KRTAP9-3Q9BYQ3 159 aa5.09□□□□□ -1.59
NPIPA1-206ENST00000541836 LCE3CQ5T5A8 94 aa5.05□□□□□ -1.6
NPIPA1-206ENST00000541836 KRTAP19-5Q3LI72 72 aa5.04□□□□□ -1.6
NPIPA1-206ENST00000541836 KMT2DO14686 5537 aa5.02□□□□□ -1.61
NPIPA1-206ENST00000541836 LCE2BO14633 110 aa4.95□□□□□ -1.62
NPIPA1-206ENST00000541836 KRTAP9-6A8MVA2 160 aa4.94□□□□□ -1.62
NPIPA1-206ENST00000541836 FSIP2Q5CZC0 6907 aa4.85□□□□□ -1.63
NPIPA1-206ENST00000541836 KRTAP4-8A0A0G2JLE6 195 aa4.84□□□□□ -1.63
NPIPA1-206ENST00000541836 KRTAP4-8Q9BYQ9 185 aa4.84□□□□□ -1.63
NPIPA1-206ENST00000541836 KRTAP2-3P0C7H8 128 aa4.82□□□□□ -1.64
NPIPA1-206ENST00000541836 KRTAP2-4Q9BYR9 128 aa4.82□□□□□ -1.64
NPIPA1-206ENST00000541836 KRTAP2-1Q9BYU5 128 aa4.82□□□□□ -1.64
NPIPA1-206ENST00000541836 KRTAP4-7Q9BYR0 210 aa4.8□□□□□ -1.64
NPIPA1-206ENST00000541836 KRTAP19-7Q3SYF9 63 aa4.71□□□□□ -1.66
NPIPA1-206ENST00000541836 KRTAP9-2Q9BYQ4 174 aa4.6□□□□□ -1.67
NPIPA1-206ENST00000541836 MT1LQ93083 61 aa4.59□□□□□ -1.67
NPIPA1-206ENST00000541836 SSPOA2VEC9 5147 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms