RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 FAT3Q8TDW7 4589 aa6.95□□□□□ -1.3
PRKAB1-206ENST00000541640 KRTAP4-5Q9BYR2 181 aa6.94□□□□□ -1.3
PRKAB1-206ENST00000541640 RPL37P61927 97 aaKnown RBP6.93□□□□□ -1.3
PRKAB1-206ENST00000541640 LRP1Q07954 4544 aaKnown RBP6.92□□□□□ -1.3
PRKAB1-206ENST00000541640 XP32Q5T750 250 aa6.9□□□□□ -1.31
PRKAB1-206ENST00000541640 LINC01554Q52M75 96 aa6.89□□□□□ -1.31
PRKAB1-206ENST00000541640 HERC2O95714 4834 aa6.88□□□□□ -1.31
PRKAB1-206ENST00000541640 A0A1B0GU33 70 aa6.87□□□□□ -1.31
PRKAB1-206ENST00000541640 H0YAA0 97 aa6.87□□□□□ -1.31
PRKAB1-206ENST00000541640 MYCBP2O75592 4640 aa6.86□□□□□ -1.31
PRKAB1-206ENST00000541640 H1FX-AS1Q4G0G2 97 aa6.86□□□□□ -1.31
PRKAB1-206ENST00000541640 ABCA13Q86UQ4 5058 aa6.85□□□□□ -1.31
PRKAB1-206ENST00000541640 MT1HL1P0DM35 61 aa6.84□□□□□ -1.31
PRKAB1-206ENST00000541640 CSAG1Q6PB30 78 aa6.84□□□□□ -1.31
PRKAB1-206ENST00000541640 KRTAP3-3Q9BYR6 98 aa6.79□□□□□ -1.32
PRKAB1-206ENST00000541640 DMBT1Q9UGM3 2413 aaPredicted RBP6.78□□□□□ -1.32
PRKAB1-206ENST00000541640 S4R3F8 94 aa6.73□□□□□ -1.33
PRKAB1-206ENST00000541640 J3QL48 77 aa6.72□□□□□ -1.33
PRKAB1-206ENST00000541640 KRTAP10-6P60371 365 aaPredicted RBP6.71□□□□□ -1.34
PRKAB1-206ENST00000541640 TPRXLQ17RH7 258 aa6.7□□□□□ -1.34
PRKAB1-206ENST00000541640 KRTAP3-2Q9BYR7 98 aa6.67□□□□□ -1.34
PRKAB1-206ENST00000541640 PCLOQ9Y6V0 5065 aa6.66□□□□□ -1.34
PRKAB1-206ENST00000541640 K7ERS5 55 aa6.63□□□□□ -1.35
PRKAB1-206ENST00000541640 KRTAP25-1Q3LHN0 102 aa6.6□□□□□ -1.35
PRKAB1-206ENST00000541640 KRTAP13-4Q3LI77 160 aa6.6□□□□□ -1.35
PRKAB1-206ENST00000541640 P0C880 135 aa6.56□□□□□ -1.36
PRKAB1-206ENST00000541640 CRIPTQ9P021 101 aa6.53□□□□□ -1.36
PRKAB1-206ENST00000541640 A0A0D9SG42 100 aa6.5□□□□□ -1.37
PRKAB1-206ENST00000541640 LRP2P98164 4655 aa6.5□□□□□ -1.37
PRKAB1-206ENST00000541640 LPAP08519 4548 aa6.48□□□□□ -1.37
PRKAB1-206ENST00000541640 ROMO1P60602 79 aa6.48□□□□□ -1.37
PRKAB1-206ENST00000541640 HERC1Q15751 4861 aa6.45□□□□□ -1.38
PRKAB1-206ENST00000541640 SEC61BP60468 96 aaKnown RBP6.43□□□□□ -1.38
PRKAB1-206ENST00000541640 M0QZ58 72 aa6.4□□□□□ -1.38
PRKAB1-206ENST00000541640 KRTAP12-2P59991 146 aa6.38□□□□□ -1.39
PRKAB1-206ENST00000541640 KRTAP12-1P59990 96 aa6.36□□□□□ -1.39
PRKAB1-206ENST00000541640 HMCN2Q8NDA2 5059 aa6.36□□□□□ -1.39
PRKAB1-206ENST00000541640 KRTAP4-1Q9BYQ7 146 aa6.32□□□□□ -1.4
PRKAB1-206ENST00000541640 SPINT4Q6UDR6 99 aa6.31□□□□□ -1.4
PRKAB1-206ENST00000541640 MUC17Q685J3 4493 aa6.29□□□□□ -1.4
PRKAB1-206ENST00000541640 KRTAP19-2Q3LHN2 52 aa6.24□□□□□ -1.41
PRKAB1-206ENST00000541640 C10orf95Q9H7T3 257 aa6.24□□□□□ -1.41
PRKAB1-206ENST00000541640 R4GN34 69 aa6.23□□□□□ -1.41
PRKAB1-206ENST00000541640 A0A0A0MQY5 61 aa6.2□□□□□ -1.42
PRKAB1-206ENST00000541640 LORP23490 312 aaPredicted RBP6.16□□□□□ -1.42
PRKAB1-206ENST00000541640 UBR4Q5T4S7 5183 aa6.13□□□□□ -1.43
PRKAB1-206ENST00000541640 KRTAP15-1Q3LI76 137 aa6.1□□□□□ -1.43
PRKAB1-206ENST00000541640 MUC2Q02817 5179 aa6.08□□□□□ -1.44
PRKAB1-206ENST00000541640 RNF213Q63HN8 5207 aa6.05□□□□□ -1.44
PRKAB1-206ENST00000541640 NDUFAF8A1L188 74 aa6.03□□□□□ -1.44
PRKAB1-206ENST00000541640 FLGP20930 4061 aaPredicted RBP5.98□□□□□ -1.45
PRKAB1-206ENST00000541640 CAMK2N1Q7Z7J9 78 aa5.89□□□□□ -1.47
PRKAB1-206ENST00000541640 LCE2CQ5TA81 110 aa5.88□□□□□ -1.47
PRKAB1-206ENST00000541640 FAT4Q6V0I7 4981 aa5.83□□□□□ -1.48
PRKAB1-206ENST00000541640 PP632Q6XCG6 107 aa5.79□□□□□ -1.48
PRKAB1-206ENST00000541640 MT1HP80294 61 aa5.75□□□□□ -1.49
PRKAB1-206ENST00000541640 M0R2T5 61 aa5.75□□□□□ -1.49
PRKAB1-206ENST00000541640 SPRR2GQ9BYE4 73 aa5.74□□□□□ -1.49
PRKAB1-206ENST00000541640 KRTAP19-1Q8IUB9 90 aa5.7□□□□□ -1.5
PRKAB1-206ENST00000541640 PLAC4Q8WY50 150 aa5.7□□□□□ -1.5
PRKAB1-206ENST00000541640 TNP1P09430 55 aa5.69□□□□□ -1.5
PRKAB1-206ENST00000541640 LUZP6Q538Z0 58 aa5.68□□□□□ -1.5
PRKAB1-206ENST00000541640 KRTAP23-1A1A580 65 aa5.66□□□□□ -1.5
PRKAB1-206ENST00000541640 MT2AP02795 61 aa5.62□□□□□ -1.51
PRKAB1-206ENST00000541640 MT1FP04733 61 aa5.6□□□□□ -1.51
PRKAB1-206ENST00000541640 KRTAP9-8Q9BYQ0 159 aa5.59□□□□□ -1.51
PRKAB1-206ENST00000541640 KRTAP10-10P60014 251 aa5.58□□□□□ -1.52
PRKAB1-206ENST00000541640 LCE2AQ5TA79 106 aaPredicted RBP5.56□□□□□ -1.52
PRKAB1-206ENST00000541640 KRTAP19-8Q3LI54 63 aa5.51□□□□□ -1.53
PRKAB1-206ENST00000541640 MT1BP07438 61 aa5.42□□□□□ -1.54
PRKAB1-206ENST00000541640 LCE3AQ5TA76 89 aa5.39□□□□□ -1.55
PRKAB1-206ENST00000541640 SPRR5A0A1B0GTR4 108 aa5.37□□□□□ -1.55
PRKAB1-206ENST00000541640 KRTAP10-5P60370 271 aa5.36□□□□□ -1.55
PRKAB1-206ENST00000541640 KRTAP9-3Q9BYQ3 159 aa5.36□□□□□ -1.55
PRKAB1-206ENST00000541640 MT1XP80297 61 aa5.35□□□□□ -1.55
PRKAB1-206ENST00000541640 KRTAP8-1Q8IUC2 63 aa5.29□□□□□ -1.56
PRKAB1-206ENST00000541640 KRTAP10-12P60413 245 aa5.22□□□□□ -1.57
PRKAB1-206ENST00000541640 LCE2BO14633 110 aa5.2□□□□□ -1.58
PRKAB1-206ENST00000541640 PRO2289Q9P1D8 64 aa5.19□□□□□ -1.58
PRKAB1-206ENST00000541640 KRTAP10-7P60409 375 aaPredicted RBP5.18□□□□□ -1.58
PRKAB1-206ENST00000541640 KRTAP12-3P60328 96 aa5.14□□□□□ -1.59
PRKAB1-206ENST00000541640 USH2AO75445 5202 aa5.13□□□□□ -1.59
PRKAB1-206ENST00000541640 LCE2DQ5TA82 110 aaPredicted RBP5.08□□□□□ -1.6
PRKAB1-206ENST00000541640 FSIP2Q5CZC0 6907 aa5.02□□□□□ -1.61
PRKAB1-206ENST00000541640 SSPOA2VEC9 5147 aa4.98□□□□□ -1.61
PRKAB1-206ENST00000541640 KRTAP9-2Q9BYQ4 174 aa4.96□□□□□ -1.62
PRKAB1-206ENST00000541640 KRTAP19-5Q3LI72 72 aa4.95□□□□□ -1.62
PRKAB1-206ENST00000541640 KRTAP19-6Q3LI70 58 aa4.88□□□□□ -1.63
PRKAB1-206ENST00000541640 KRTAP4-8A0A0G2JLE6 195 aa4.85□□□□□ -1.63
PRKAB1-206ENST00000541640 KRTAP4-8Q9BYQ9 185 aa4.85□□□□□ -1.63
PRKAB1-206ENST00000541640 LCE3CQ5T5A8 94 aa4.85□□□□□ -1.63
PRKAB1-206ENST00000541640 KRTAP19-7Q3SYF9 63 aa4.78□□□□□ -1.64
PRKAB1-206ENST00000541640 CRCT1Q9UGL9 99 aa4.77□□□□□ -1.65
PRKAB1-206ENST00000541640 FCGBPQ9Y6R7 5405 aaPredicted RBP4.76□□□□□ -1.65
PRKAB1-206ENST00000541640 INE1O15225 51 aa4.75□□□□□ -1.65
PRKAB1-206ENST00000541640 KMT2DO14686 5537 aa4.73□□□□□ -1.65
PRKAB1-206ENST00000541640 KRTAP19-4Q3LI73 84 aa4.71□□□□□ -1.66
PRKAB1-206ENST00000541640 KRTAP9-6A0A140TA67 174 aa4.67□□□□□ -1.66
PRKAB1-206ENST00000541640 MT1EP04732 61 aa4.64□□□□□ -1.67
PRKAB1-206ENST00000541640 KRTAP9-6A8MVA2 160 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 176.8 ms