RNA–Protein interactions for RNA: ENST00000540768.5

NUP85-203, Transcript of nucleoporin 85, humanhuman

TSL 2 BASIC

Gene NUP85, Length 1,926 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-203ENST00000540768 HMCN2Q8NDA2 5059 aa5.3□□□□□ -1.56
NUP85-203ENST00000540768 KRTAP3-1Q9BYR8 98 aa5.29□□□□□ -1.56
NUP85-203ENST00000540768 FAT3Q8TDW7 4589 aa5.28□□□□□ -1.56
NUP85-203ENST00000540768 SPATA8Q6RVD6 105 aa5.27□□□□□ -1.57
NUP85-203ENST00000540768 KTN1-AS1Q86SY8 53 aa5.25□□□□□ -1.57
NUP85-203ENST00000540768 UQCR11O14957 56 aa5.24□□□□□ -1.57
NUP85-203ENST00000540768 LCE2DQ5TA82 110 aaPredicted RBP5.23□□□□□ -1.57
NUP85-203ENST00000540768 MT1HL1P0DM35 61 aa5.22□□□□□ -1.57
NUP85-203ENST00000540768 MIR22HGQ0VDD5 57 aa5.22□□□□□ -1.57
NUP85-203ENST00000540768 COX6B2Q6YFQ2 88 aa5.19□□□□□ -1.58
NUP85-203ENST00000540768 RNF213Q63HN8 5207 aa5.18□□□□□ -1.58
NUP85-203ENST00000540768 RPL37P61927 97 aaKnown RBP5.17□□□□□ -1.58
NUP85-203ENST00000540768 XP32Q5T750 250 aa5.15□□□□□ -1.58
NUP85-203ENST00000540768 LRP2P98164 4655 aa5.14□□□□□ -1.59
NUP85-203ENST00000540768 RBM12B-AS1Q9P1G2 102 aa5.13□□□□□ -1.59
NUP85-203ENST00000540768 H0YAA0 97 aa5.1□□□□□ -1.59
NUP85-203ENST00000540768 A0A1B0GU33 70 aa5.09□□□□□ -1.6
NUP85-203ENST00000540768 H1FX-AS1Q4G0G2 97 aa5.09□□□□□ -1.6
NUP85-203ENST00000540768 KRTAP3-3Q9BYR6 98 aa5.07□□□□□ -1.6
NUP85-203ENST00000540768 ADM2Q7Z4H4 148 aa5.04□□□□□ -1.6
NUP85-203ENST00000540768 PRAC1Q96KF2 57 aa5.02□□□□□ -1.61
NUP85-203ENST00000540768 MUC2Q02817 5179 aa5□□□□□ -1.61
NUP85-203ENST00000540768 KRTAP10-6P60371 365 aaPredicted RBP5□□□□□ -1.61
NUP85-203ENST00000540768 S4R3F8 94 aa5□□□□□ -1.61
NUP85-203ENST00000540768 LPAP08519 4548 aa5□□□□□ -1.61
NUP85-203ENST00000540768 TPRXLQ17RH7 258 aa4.99□□□□□ -1.61
NUP85-203ENST00000540768 KRTAP3-2Q9BYR7 98 aa4.98□□□□□ -1.61
NUP85-203ENST00000540768 KRTAP13-4Q3LI77 160 aa4.92□□□□□ -1.62
NUP85-203ENST00000540768 CSAG1Q6PB30 78 aa4.89□□□□□ -1.63
NUP85-203ENST00000540768 P0C880 135 aa4.89□□□□□ -1.63
NUP85-203ENST00000540768 LINC01554Q52M75 96 aa4.87□□□□□ -1.63
NUP85-203ENST00000540768 K7ERS5 55 aa4.87□□□□□ -1.63
NUP85-203ENST00000540768 A0A0D9SG42 100 aa4.83□□□□□ -1.64
NUP85-203ENST00000540768 SEC61BP60468 96 aaKnown RBP4.8□□□□□ -1.64
NUP85-203ENST00000540768 KRTAP25-1Q3LHN0 102 aa4.8□□□□□ -1.64
NUP85-203ENST00000540768 ROMO1P60602 79 aa4.78□□□□□ -1.64
NUP85-203ENST00000540768 KRTAP9-2Q9BYQ4 174 aa4.78□□□□□ -1.64
NUP85-203ENST00000540768 KRTAP4-1Q9BYQ7 146 aa4.77□□□□□ -1.65
NUP85-203ENST00000540768 MUC17Q685J3 4493 aa4.77□□□□□ -1.65
NUP85-203ENST00000540768 LCE2AQ5TA79 106 aaPredicted RBP4.75□□□□□ -1.65
NUP85-203ENST00000540768 FAT4Q6V0I7 4981 aa4.75□□□□□ -1.65
NUP85-203ENST00000540768 M0QZ58 72 aa4.74□□□□□ -1.65
NUP85-203ENST00000540768 KRTAP12-2P59991 146 aa4.74□□□□□ -1.65
NUP85-203ENST00000540768 KRTAP12-1P59990 96 aa4.73□□□□□ -1.65
NUP85-203ENST00000540768 CRIPTQ9P021 101 aa4.72□□□□□ -1.65
NUP85-203ENST00000540768 KRTAP19-2Q3LHN2 52 aa4.7□□□□□ -1.66
NUP85-203ENST00000540768 SPINT4Q6UDR6 99 aa4.68□□□□□ -1.66
NUP85-203ENST00000540768 KRTAP9-6A0A140TA67 174 aa4.65□□□□□ -1.67
NUP85-203ENST00000540768 FSIP2Q5CZC0 6907 aa4.63□□□□□ -1.67
NUP85-203ENST00000540768 LORP23490 312 aaPredicted RBP4.62□□□□□ -1.67
NUP85-203ENST00000540768 R4GN34 69 aa4.62□□□□□ -1.67
NUP85-203ENST00000540768 C10orf95Q9H7T3 257 aa4.59□□□□□ -1.67
NUP85-203ENST00000540768 FLGP20930 4061 aaPredicted RBP4.54□□□□□ -1.68
NUP85-203ENST00000540768 H3BS24 57 aa4.53□□□□□ -1.68
NUP85-203ENST00000540768 LCE2CQ5TA81 110 aa4.5□□□□□ -1.69
NUP85-203ENST00000540768 CRCT1Q9UGL9 99 aa4.49□□□□□ -1.69
NUP85-203ENST00000540768 MT1HP80294 61 aa4.46□□□□□ -1.69
NUP85-203ENST00000540768 M0R2T5 61 aa4.4□□□□□ -1.7
NUP85-203ENST00000540768 KRTAP15-1Q3LI76 137 aa4.36□□□□□ -1.71
NUP85-203ENST00000540768 CAMK2N1Q7Z7J9 78 aa4.36□□□□□ -1.71
NUP85-203ENST00000540768 SPRR2GQ9BYE4 73 aa4.29□□□□□ -1.72
NUP85-203ENST00000540768 LCE2BO14633 110 aa4.29□□□□□ -1.72
NUP85-203ENST00000540768 KRTAP19-1Q8IUB9 90 aa4.27□□□□□ -1.73
NUP85-203ENST00000540768 PP632Q6XCG6 107 aa4.27□□□□□ -1.73
NUP85-203ENST00000540768 USH2AO75445 5202 aa4.23□□□□□ -1.73
NUP85-203ENST00000540768 MT2AP02795 61 aa4.22□□□□□ -1.73
NUP85-203ENST00000540768 MT1FP04733 61 aa4.21□□□□□ -1.74
NUP85-203ENST00000540768 TNP1P09430 55 aa4.21□□□□□ -1.74
NUP85-203ENST00000540768 PLAC4Q8WY50 150 aa4.21□□□□□ -1.74
NUP85-203ENST00000540768 KRTAP9-8Q9BYQ0 159 aa4.21□□□□□ -1.74
NUP85-203ENST00000540768 NDUFAF8A1L188 74 aa4.2□□□□□ -1.74
NUP85-203ENST00000540768 A0A0A0MQY5 61 aa4.19□□□□□ -1.74
NUP85-203ENST00000540768 KRTAP23-1A1A580 65 aa4.19□□□□□ -1.74
NUP85-203ENST00000540768 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.18□□□□□ -1.74
NUP85-203ENST00000540768 KRTAP10-10P60014 251 aa4.17□□□□□ -1.74
NUP85-203ENST00000540768 KRTAP9-7A8MTY7 169 aa4.17□□□□□ -1.74
NUP85-203ENST00000540768 SSPOA2VEC9 5147 aa4.15□□□□□ -1.75
NUP85-203ENST00000540768 KRTAP19-8Q3LI54 63 aa4.13□□□□□ -1.75
NUP85-203ENST00000540768 FCGBPQ9Y6R7 5405 aaPredicted RBP4.11□□□□□ -1.75
NUP85-203ENST00000540768 MACF1Q9UPN3 7388 aaKnown RBP4.08□□□□□ -1.76
NUP85-203ENST00000540768 MT1BP07438 61 aa4.07□□□□□ -1.76
NUP85-203ENST00000540768 KRTAP9-3Q9BYQ3 159 aa4.07□□□□□ -1.76
NUP85-203ENST00000540768 SYNE2Q8WXH0 6885 aaKnown RBP4.05□□□□□ -1.76
NUP85-203ENST00000540768 KRTAP10-5P60370 271 aa4.02□□□□□ -1.77
NUP85-203ENST00000540768 MT1XP80297 61 aa4.01□□□□□ -1.77
NUP85-203ENST00000540768 LCE3AQ5TA76 89 aa4.01□□□□□ -1.77
NUP85-203ENST00000540768 SPRR5A0A1B0GTR4 108 aa3.98□□□□□ -1.77
NUP85-203ENST00000540768 KRTAP19-6Q3LI70 58 aa3.95□□□□□ -1.78
NUP85-203ENST00000540768 LUZP6Q538Z0 58 aa3.94□□□□□ -1.78
NUP85-203ENST00000540768 KRTAP8-1Q8IUC2 63 aa3.93□□□□□ -1.78
NUP85-203ENST00000540768 KRTAP10-7P60409 375 aaPredicted RBP3.88□□□□□ -1.79
NUP85-203ENST00000540768 KRTAP10-12P60413 245 aa3.88□□□□□ -1.79
NUP85-203ENST00000540768 KRTAP6-3Q3LI67 103 aa3.85□□□□□ -1.79
NUP85-203ENST00000540768 PRO2289Q9P1D8 64 aa3.85□□□□□ -1.79
NUP85-203ENST00000540768 KRTAP12-3P60328 96 aa3.82□□□□□ -1.8
NUP85-203ENST00000540768 LOC100996750A0A140TA64 210 aa3.75□□□□□ -1.81
NUP85-203ENST00000540768 KRTAP4-6Q9BYQ5 205 aa3.75□□□□□ -1.81
NUP85-203ENST00000540768 NEBP20929 6669 aa3.75□□□□□ -1.81
NUP85-203ENST00000540768 MUC12Q9UKN1 5478 aa3.74□□□□□ -1.81
NUP85-203ENST00000540768 KRTAP19-5Q3LI72 72 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms