RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 BRK1Q8WUW1 75 aa8.7□□□□□ -1.02
LTBR-207ENST00000539925 PCLOQ9Y6V0 5065 aa8.69□□□□□ -1.02
LTBR-207ENST00000539925 A6NED7 52 aa8.68□□□□□ -1.02
LTBR-207ENST00000539925 S4R3F8 94 aa8.68□□□□□ -1.02
LTBR-207ENST00000539925 LRP2P98164 4655 aa8.67□□□□□ -1.02
LTBR-207ENST00000539925 LCA10Q71F78 164 aa8.6□□□□□ -1.03
LTBR-207ENST00000539925 LPAP08519 4548 aa8.59□□□□□ -1.03
LTBR-207ENST00000539925 CDC42SE1Q9NRR8 79 aa8.59□□□□□ -1.03
LTBR-207ENST00000539925 UQCR11O14957 56 aa8.58□□□□□ -1.04
LTBR-207ENST00000539925 KRTAP3-3Q9BYR6 98 aa8.56□□□□□ -1.04
LTBR-207ENST00000539925 CSAG1Q6PB30 78 aa8.5□□□□□ -1.05
LTBR-207ENST00000539925 MUC17Q685J3 4493 aa8.48□□□□□ -1.05
LTBR-207ENST00000539925 SPATA8Q6RVD6 105 aa8.46□□□□□ -1.05
LTBR-207ENST00000539925 KRTAP4-1Q9BYQ7 146 aa8.46□□□□□ -1.05
LTBR-207ENST00000539925 MIR22HGQ0VDD5 57 aa8.46□□□□□ -1.06
LTBR-207ENST00000539925 A0A1B0GU33 70 aa8.45□□□□□ -1.06
LTBR-207ENST00000539925 H0YAA0 97 aa8.37□□□□□ -1.07
LTBR-207ENST00000539925 HMCN2Q8NDA2 5059 aa8.34□□□□□ -1.07
LTBR-207ENST00000539925 A8MU10 97 aa8.34□□□□□ -1.07
LTBR-207ENST00000539925 HERC1Q15751 4861 aa8.33□□□□□ -1.08
LTBR-207ENST00000539925 KRTAP10-6P60371 365 aaPredicted RBP8.33□□□□□ -1.08
LTBR-207ENST00000539925 KRTAP19-2Q3LHN2 52 aa8.32□□□□□ -1.08
LTBR-207ENST00000539925 KRTAP3-2Q9BYR7 98 aa8.31□□□□□ -1.08
LTBR-207ENST00000539925 PMAIP1Q13794 54 aa8.28□□□□□ -1.08
LTBR-207ENST00000539925 ADM2Q7Z4H4 148 aa8.28□□□□□ -1.08
LTBR-207ENST00000539925 P0C880 135 aa8.21□□□□□ -1.1
LTBR-207ENST00000539925 M0QZ58 72 aa8.18□□□□□ -1.1
LTBR-207ENST00000539925 A6NN06 94 aa8.16□□□□□ -1.1
LTBR-207ENST00000539925 K7ERS5 55 aa8.16□□□□□ -1.1
LTBR-207ENST00000539925 KTN1-AS1Q86SY8 53 aa8.08□□□□□ -1.12
LTBR-207ENST00000539925 KRTAP13-4Q3LI77 160 aa8.08□□□□□ -1.12
LTBR-207ENST00000539925 FLGP20930 4061 aaPredicted RBP8.06□□□□□ -1.12
LTBR-207ENST00000539925 LCE2CQ5TA81 110 aa8.05□□□□□ -1.12
LTBR-207ENST00000539925 R4GN34 69 aa8.02□□□□□ -1.13
LTBR-207ENST00000539925 A0A0D9SG42 100 aa7.98□□□□□ -1.13
LTBR-207ENST00000539925 CRIPTQ9P021 101 aa7.98□□□□□ -1.13
LTBR-207ENST00000539925 MUC2Q02817 5179 aa7.97□□□□□ -1.13
LTBR-207ENST00000539925 M0R2T5 61 aa7.9□□□□□ -1.14
LTBR-207ENST00000539925 MT1HP80294 61 aa7.89□□□□□ -1.15
LTBR-207ENST00000539925 RNF213Q63HN8 5207 aa7.86□□□□□ -1.15
LTBR-207ENST00000539925 UBR4Q5T4S7 5183 aa7.85□□□□□ -1.15
LTBR-207ENST00000539925 KRTAP12-1P59990 96 aa7.85□□□□□ -1.15
LTBR-207ENST00000539925 LORP23490 312 aaPredicted RBP7.82□□□□□ -1.16
LTBR-207ENST00000539925 SPINT4Q6UDR6 99 aa7.82□□□□□ -1.16
LTBR-207ENST00000539925 KRTAP12-2P59991 146 aa7.8□□□□□ -1.16
LTBR-207ENST00000539925 LINC01554Q52M75 96 aa7.8□□□□□ -1.16
LTBR-207ENST00000539925 ROMO1P60602 79 aa7.76□□□□□ -1.17
LTBR-207ENST00000539925 FAT4Q6V0I7 4981 aa7.69□□□□□ -1.18
LTBR-207ENST00000539925 SPRR2GQ9BYE4 73 aa7.65□□□□□ -1.18
LTBR-207ENST00000539925 MT2AP02795 61 aa7.63□□□□□ -1.19
LTBR-207ENST00000539925 KRTAP10-10P60014 251 aa7.63□□□□□ -1.19
LTBR-207ENST00000539925 KRTAP9-8Q9BYQ0 159 aa7.63□□□□□ -1.19
LTBR-207ENST00000539925 PRAC1Q96KF2 57 aa7.6□□□□□ -1.19
LTBR-207ENST00000539925 MT1FP04733 61 aa7.57□□□□□ -1.2
LTBR-207ENST00000539925 CAMK2N1Q7Z7J9 78 aa7.54□□□□□ -1.2
LTBR-207ENST00000539925 KRTAP19-1Q8IUB9 90 aa7.54□□□□□ -1.2
LTBR-207ENST00000539925 KRTAP25-1Q3LHN0 102 aa7.5□□□□□ -1.21
LTBR-207ENST00000539925 PLAC4Q8WY50 150 aa7.49□□□□□ -1.21
LTBR-207ENST00000539925 LCE2AQ5TA79 106 aaPredicted RBP7.45□□□□□ -1.22
LTBR-207ENST00000539925 KRTAP19-8Q3LI54 63 aa7.41□□□□□ -1.22
LTBR-207ENST00000539925 C10orf95Q9H7T3 257 aa7.39□□□□□ -1.23
LTBR-207ENST00000539925 KRTAP9-3Q9BYQ3 159 aa7.36□□□□□ -1.23
LTBR-207ENST00000539925 TNP1P09430 55 aa7.25□□□□□ -1.25
LTBR-207ENST00000539925 MT1BP07438 61 aa7.22□□□□□ -1.25
LTBR-207ENST00000539925 PP632Q6XCG6 107 aa7.22□□□□□ -1.25
LTBR-207ENST00000539925 KRTAP23-1A1A580 65 aa7.16□□□□□ -1.26
LTBR-207ENST00000539925 PRO2289Q9P1D8 64 aa7.1□□□□□ -1.27
LTBR-207ENST00000539925 LCE2BO14633 110 aa7.07□□□□□ -1.28
LTBR-207ENST00000539925 MT1XP80297 61 aa7.04□□□□□ -1.28
LTBR-207ENST00000539925 KRTAP10-5P60370 271 aa7.03□□□□□ -1.28
LTBR-207ENST00000539925 KRTAP9-2Q9BYQ4 174 aa6.94□□□□□ -1.3
LTBR-207ENST00000539925 H3BS24 57 aa6.9□□□□□ -1.31
LTBR-207ENST00000539925 LCE2DQ5TA82 110 aaPredicted RBP6.82□□□□□ -1.32
LTBR-207ENST00000539925 KRTAP10-12P60413 245 aa6.81□□□□□ -1.32
LTBR-207ENST00000539925 LCE3AQ5TA76 89 aa6.78□□□□□ -1.32
LTBR-207ENST00000539925 KRTAP8-1Q8IUC2 63 aa6.74□□□□□ -1.33
LTBR-207ENST00000539925 KRTAP10-7P60409 375 aaPredicted RBP6.73□□□□□ -1.33
LTBR-207ENST00000539925 USH2AO75445 5202 aa6.7□□□□□ -1.34
LTBR-207ENST00000539925 KRTAP19-6Q3LI70 58 aa6.68□□□□□ -1.34
LTBR-207ENST00000539925 KRTAP9-6A0A140TA67 174 aa6.68□□□□□ -1.34
LTBR-207ENST00000539925 KRTAP15-1Q3LI76 137 aa6.65□□□□□ -1.35
LTBR-207ENST00000539925 CRCT1Q9UGL9 99 aa6.58□□□□□ -1.36
LTBR-207ENST00000539925 KRTAP12-3P60328 96 aa6.57□□□□□ -1.36
LTBR-207ENST00000539925 FSIP2Q5CZC0 6907 aa6.52□□□□□ -1.37
LTBR-207ENST00000539925 SSPOA2VEC9 5147 aa6.49□□□□□ -1.37
LTBR-207ENST00000539925 NDUFAF8A1L188 74 aa6.41□□□□□ -1.38
LTBR-207ENST00000539925 KRTAP19-5Q3LI72 72 aa6.4□□□□□ -1.38
LTBR-207ENST00000539925 SPRR5A0A1B0GTR4 108 aa6.38□□□□□ -1.39
LTBR-207ENST00000539925 KRTAP4-8A0A0G2JLE6 195 aa6.37□□□□□ -1.39
LTBR-207ENST00000539925 KRTAP4-8Q9BYQ9 185 aa6.37□□□□□ -1.39
LTBR-207ENST00000539925 LUZP6Q538Z0 58 aa6.35□□□□□ -1.39
LTBR-207ENST00000539925 KRTAP19-4Q3LI73 84 aa6.33□□□□□ -1.4
LTBR-207ENST00000539925 KRTAP19-7Q3SYF9 63 aa6.27□□□□□ -1.41
LTBR-207ENST00000539925 FCGBPQ9Y6R7 5405 aaPredicted RBP6.18□□□□□ -1.42
LTBR-207ENST00000539925 MT1EP04732 61 aa6.17□□□□□ -1.42
LTBR-207ENST00000539925 KMT2DO14686 5537 aa6.15□□□□□ -1.42
LTBR-207ENST00000539925 LCE3CQ5T5A8 94 aa6.14□□□□□ -1.43
LTBR-207ENST00000539925 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.13□□□□□ -1.43
LTBR-207ENST00000539925 MT1LQ93083 61 aa6.08□□□□□ -1.44
LTBR-207ENST00000539925 KRTAP9-7A8MTY7 169 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms