RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 A8MUN3 132 aa5.56□□□□□ -1.52
SPARC-209ENST00000539687 C4orf26Q17RF5 130 aa5.56□□□□□ -1.52
SPARC-209ENST00000539687 KRTAP9-7A8MTY7 169 aa5.55□□□□□ -1.52
SPARC-209ENST00000539687 CHKB-CPT1BH3BT56 60 aa5.54□□□□□ -1.52
SPARC-209ENST00000539687 KRTAP4-7Q9BYR0 210 aa5.54□□□□□ -1.52
SPARC-209ENST00000539687 KRTAP19-4Q3LI73 84 aa5.53□□□□□ -1.52
SPARC-209ENST00000539687 MYCBP2O75592 4640 aa5.52□□□□□ -1.53
SPARC-209ENST00000539687 ATP11AUNQ6ZP68 121 aa5.51□□□□□ -1.53
SPARC-209ENST00000539687 MT1HL1P0DM35 61 aa5.48□□□□□ -1.53
SPARC-209ENST00000539687 LINC01558Q9Y6Z2 57 aa5.48□□□□□ -1.53
SPARC-209ENST00000539687 RPL37P61927 97 aaKnown RBP5.47□□□□□ -1.53
SPARC-209ENST00000539687 SPTSSBQ8NFR3 76 aa5.47□□□□□ -1.53
SPARC-209ENST00000539687 KRTAP4-9Q9BYQ8 210 aa5.46□□□□□ -1.54
SPARC-209ENST00000539687 FLG2Q5D862 2391 aaPredicted RBP5.45□□□□□ -1.54
SPARC-209ENST00000539687 SPINK7P58062 85 aa5.45□□□□□ -1.54
SPARC-209ENST00000539687 PRR15LQ9BU68 103 aa5.45□□□□□ -1.54
SPARC-209ENST00000539687 HMCN2Q8NDA2 5059 aa5.44□□□□□ -1.54
SPARC-209ENST00000539687 PSPHP1O15172 72 aa5.43□□□□□ -1.54
SPARC-209ENST00000539687 TPRXLQ17RH7 258 aa5.42□□□□□ -1.54
SPARC-209ENST00000539687 FAT3Q8TDW7 4589 aa5.41□□□□□ -1.54
SPARC-209ENST00000539687 TNXBP22105 4242 aa5.41□□□□□ -1.54
SPARC-209ENST00000539687 Q5VV11 94 aa5.4□□□□□ -1.54
SPARC-209ENST00000539687 PRO0628Q9UI54 55 aa5.4□□□□□ -1.54
SPARC-209ENST00000539687 BRK1Q8WUW1 75 aa5.39□□□□□ -1.55
SPARC-209ENST00000539687 COX6B2Q6YFQ2 88 aa5.38□□□□□ -1.55
SPARC-209ENST00000539687 A0A1B0GU69 56 aa5.36□□□□□ -1.55
SPARC-209ENST00000539687 SEC61GP60059 68 aa5.34□□□□□ -1.55
SPARC-209ENST00000539687 LRP1Q07954 4544 aaKnown RBP5.34□□□□□ -1.56
SPARC-209ENST00000539687 A6NED7 52 aa5.33□□□□□ -1.56
SPARC-209ENST00000539687 KRTAP9-3Q9BYQ3 159 aa5.33□□□□□ -1.56
SPARC-209ENST00000539687 KRTAP4-2Q9BYR5 136 aa5.32□□□□□ -1.56
SPARC-209ENST00000539687 LCE5AQ5TCM9 118 aa5.28□□□□□ -1.56
SPARC-209ENST00000539687 KRTAP4-11Q9BYQ6 195 aa5.28□□□□□ -1.56
SPARC-209ENST00000539687 CDC42SE1Q9NRR8 79 aa5.28□□□□□ -1.56
SPARC-209ENST00000539687 RNF213Q63HN8 5207 aa5.28□□□□□ -1.56
SPARC-209ENST00000539687 SEC61BP60468 96 aaKnown RBP5.27□□□□□ -1.57
SPARC-209ENST00000539687 KRTAP3-1Q9BYR8 98 aa5.27□□□□□ -1.57
SPARC-209ENST00000539687 RBM12B-AS1Q9P1G2 102 aa5.25□□□□□ -1.57
SPARC-209ENST00000539687 UQCR11O14957 56 aa5.24□□□□□ -1.57
SPARC-209ENST00000539687 S4R3F8 94 aa5.21□□□□□ -1.58
SPARC-209ENST00000539687 H1FX-AS1Q4G0G2 97 aa5.2□□□□□ -1.58
SPARC-209ENST00000539687 LRP2P98164 4655 aa5.2□□□□□ -1.58
SPARC-209ENST00000539687 LCA10Q71F78 164 aa5.18□□□□□ -1.58
SPARC-209ENST00000539687 MIR22HGQ0VDD5 57 aa5.17□□□□□ -1.58
SPARC-209ENST00000539687 SPATA8Q6RVD6 105 aa5.17□□□□□ -1.58
SPARC-209ENST00000539687 A0A1B0GU33 70 aa5.12□□□□□ -1.59
SPARC-209ENST00000539687 PMAIP1Q13794 54 aa5.11□□□□□ -1.59
SPARC-209ENST00000539687 CSAG1Q6PB30 78 aa5.08□□□□□ -1.6
SPARC-209ENST00000539687 A8MU10 97 aa5.05□□□□□ -1.6
SPARC-209ENST00000539687 A6NN06 94 aa5.03□□□□□ -1.6
SPARC-209ENST00000539687 H0YAA0 97 aa5.02□□□□□ -1.61
SPARC-209ENST00000539687 K7ERS5 55 aa5.02□□□□□ -1.61
SPARC-209ENST00000539687 KRTAP10-6P60371 365 aaPredicted RBP4.98□□□□□ -1.61
SPARC-209ENST00000539687 KTN1-AS1Q86SY8 53 aa4.98□□□□□ -1.61
SPARC-209ENST00000539687 LPAP08519 4548 aa4.97□□□□□ -1.61
SPARC-209ENST00000539687 MUC17Q685J3 4493 aa4.97□□□□□ -1.61
SPARC-209ENST00000539687 ADM2Q7Z4H4 148 aa4.96□□□□□ -1.62
SPARC-209ENST00000539687 FAT4Q6V0I7 4981 aa4.95□□□□□ -1.62
SPARC-209ENST00000539687 M0QZ58 72 aa4.94□□□□□ -1.62
SPARC-209ENST00000539687 KRTAP4-1Q9BYQ7 146 aa4.91□□□□□ -1.62
SPARC-209ENST00000539687 P0C880 135 aa4.89□□□□□ -1.63
SPARC-209ENST00000539687 MUC2Q02817 5179 aa4.89□□□□□ -1.63
SPARC-209ENST00000539687 KRTAP19-2Q3LHN2 52 aa4.85□□□□□ -1.63
SPARC-209ENST00000539687 KRTAP13-4Q3LI77 160 aa4.82□□□□□ -1.64
SPARC-209ENST00000539687 R4GN34 69 aa4.81□□□□□ -1.64
SPARC-209ENST00000539687 A0A0D9SG42 100 aa4.8□□□□□ -1.64
SPARC-209ENST00000539687 CRCT1Q9UGL9 99 aa4.8□□□□□ -1.64
SPARC-209ENST00000539687 CRIPTQ9P021 101 aa4.79□□□□□ -1.64
SPARC-209ENST00000539687 KRTAP23-1A1A580 65 aa4.74□□□□□ -1.65
SPARC-209ENST00000539687 ROMO1P60602 79 aa4.74□□□□□ -1.65
SPARC-209ENST00000539687 KRTAP12-1P59990 96 aa4.72□□□□□ -1.65
SPARC-209ENST00000539687 SPINT4Q6UDR6 99 aa4.72□□□□□ -1.65
SPARC-209ENST00000539687 FSIP2Q5CZC0 6907 aa4.71□□□□□ -1.66
SPARC-209ENST00000539687 KRTAP12-2P59991 146 aa4.68□□□□□ -1.66
SPARC-209ENST00000539687 PRAC1Q96KF2 57 aa4.67□□□□□ -1.66
SPARC-209ENST00000539687 LINC01554Q52M75 96 aa4.66□□□□□ -1.66
SPARC-209ENST00000539687 M0R2T5 61 aa4.64□□□□□ -1.67
SPARC-209ENST00000539687 KRTAP25-1Q3LHN0 102 aa4.62□□□□□ -1.67
SPARC-209ENST00000539687 KRTAP15-1Q3LI76 137 aa4.62□□□□□ -1.67
SPARC-209ENST00000539687 KRTAP5-3Q6L8H2 238 aa4.62□□□□□ -1.67
SPARC-209ENST00000539687 FLGP20930 4061 aaPredicted RBP4.62□□□□□ -1.67
SPARC-209ENST00000539687 MT1HP80294 61 aa4.61□□□□□ -1.67
SPARC-209ENST00000539687 CAMK2N1Q7Z7J9 78 aa4.55□□□□□ -1.68
SPARC-209ENST00000539687 SPRR2GQ9BYE4 73 aa4.53□□□□□ -1.68
SPARC-209ENST00000539687 PLAC4Q8WY50 150 aa4.48□□□□□ -1.69
SPARC-209ENST00000539687 KRTAP10-10P60014 251 aa4.47□□□□□ -1.69
SPARC-209ENST00000539687 MT2AP02795 61 aa4.46□□□□□ -1.7
SPARC-209ENST00000539687 KRTAP9-8Q9BYQ0 159 aa4.44□□□□□ -1.7
SPARC-209ENST00000539687 C10orf95Q9H7T3 257 aa4.43□□□□□ -1.7
SPARC-209ENST00000539687 A0A0A0MQY5 61 aa4.42□□□□□ -1.7
SPARC-209ENST00000539687 MT1FP04733 61 aa4.42□□□□□ -1.7
SPARC-209ENST00000539687 PP632Q6XCG6 107 aa4.42□□□□□ -1.7
SPARC-209ENST00000539687 TNP1P09430 55 aa4.38□□□□□ -1.71
SPARC-209ENST00000539687 KRTAP19-8Q3LI54 63 aa4.38□□□□□ -1.71
SPARC-209ENST00000539687 SSPOA2VEC9 5147 aa4.26□□□□□ -1.73
SPARC-209ENST00000539687 USH2AO75445 5202 aa4.25□□□□□ -1.73
SPARC-209ENST00000539687 MT1BP07438 61 aa4.24□□□□□ -1.73
SPARC-209ENST00000539687 PRO2289Q9P1D8 64 aa4.24□□□□□ -1.73
SPARC-209ENST00000539687 FCGBPQ9Y6R7 5405 aaPredicted RBP4.24□□□□□ -1.73
SPARC-209ENST00000539687 MACF1Q9UPN3 7388 aaKnown RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms