RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	FAM236B	A0A1B0GV22	79 aa		5.62	□□□□□ -1.51
CLTCL1-205	ENST00000538828		H3BPC8	53 aa		5.6	□□□□□ -1.51
CLTCL1-205	ENST00000538828	MP68	P56378	58 aa		5.6	□□□□□ -1.51
CLTCL1-205	ENST00000538828	SPRR2G	Q9BYE4	73 aa		5.6	□□□□□ -1.51
CLTCL1-205	ENST00000538828	KRTAP9-7	A8MTY7	169 aa		5.59	□□□□□ -1.51
CLTCL1-205	ENST00000538828	KLKP1	Q107X0	134 aa		5.59	□□□□□ -1.51
CLTCL1-205	ENST00000538828	LINC00208	Q96KT6	92 aa		5.58	□□□□□ -1.52
CLTCL1-205	ENST00000538828	CRIPT	Q9P021	101 aa		5.58	□□□□□ -1.52
CLTCL1-205	ENST00000538828		H0YAA0	97 aa		5.57	□□□□□ -1.52
CLTCL1-205	ENST00000538828	MT-ATP8	P03928	68 aa		5.57	□□□□□ -1.52
CLTCL1-205	ENST00000538828	IMUP	Q9GZP8	106 aa		5.57	□□□□□ -1.52
CLTCL1-205	ENST00000538828	NDUFC1	O43677	76 aa		5.56	□□□□□ -1.52
CLTCL1-205	ENST00000538828	KRTAP19-8	Q3LI54	63 aa		5.56	□□□□□ -1.52
CLTCL1-205	ENST00000538828		Q5VV11	94 aa		5.52	□□□□□ -1.53
CLTCL1-205	ENST00000538828	MT1B	P07438	61 aa		5.5	□□□□□ -1.53
CLTCL1-205	ENST00000538828	SCGB1A1	P11684	91 aa		5.5	□□□□□ -1.53
CLTCL1-205	ENST00000538828	SMIM20	Q8N5G0	67 aa		5.46	□□□□□ -1.54
CLTCL1-205	ENST00000538828	DMAC1	Q96GE9	116 aa		5.45	□□□□□ -1.54
CLTCL1-205	ENST00000538828		A6NN06	94 aa		5.41	□□□□□ -1.54
CLTCL1-205	ENST00000538828	MACF1	Q9UPN3	7388 aa	Known RBP	5.41	□□□□□ -1.54
CLTCL1-205	ENST00000538828	TRAV7	A0A075B6U4	112 aa		5.39	□□□□□ -1.55
CLTCL1-205	ENST00000538828	KRTAP10-5	P60370	271 aa		5.39	□□□□□ -1.55
CLTCL1-205	ENST00000538828	KRTAP6-3	Q3LI67	103 aa		5.38	□□□□□ -1.55
CLTCL1-205	ENST00000538828	ADM2	Q7Z4H4	148 aa		5.38	□□□□□ -1.55
CLTCL1-205	ENST00000538828	C20orf197	Q8N268	126 aa		5.38	□□□□□ -1.55
CLTCL1-205	ENST00000538828	ACYP2	P14621	99 aa		5.34	□□□□□ -1.55
CLTCL1-205	ENST00000538828	ANAPC13	Q9BS18	74 aa		5.32	□□□□□ -1.56
CLTCL1-205	ENST00000538828	SERP2	Q8N6R1	65 aa		5.29	□□□□□ -1.56
CLTCL1-205	ENST00000538828	SPTSSB	Q8NFR3	76 aa		5.29	□□□□□ -1.56
CLTCL1-205	ENST00000538828		R4GN34	69 aa		5.28	□□□□□ -1.56
CLTCL1-205	ENST00000538828	SYNE2	Q8WXH0	6885 aa	Known RBP	5.27	□□□□□ -1.57
CLTCL1-205	ENST00000538828		P0C880	135 aa		5.27	□□□□□ -1.57
CLTCL1-205	ENST00000538828	PCP4	P48539	62 aa		5.27	□□□□□ -1.57
CLTCL1-205	ENST00000538828	COX7C	P15954	63 aa		5.26	□□□□□ -1.57
CLTCL1-205	ENST00000538828	SPANXA2-OT1	Q8N9U9	137 aa		5.26	□□□□□ -1.57
CLTCL1-205	ENST00000538828	KRTAP3-2	Q9BYR7	98 aa		5.26	□□□□□ -1.57
CLTCL1-205	ENST00000538828	PRO2289	Q9P1D8	64 aa		5.24	□□□□□ -1.57
CLTCL1-205	ENST00000538828	PLAC4	Q8WY50	150 aa		5.23	□□□□□ -1.57
CLTCL1-205	ENST00000538828		M0QZ58	72 aa		5.21	□□□□□ -1.58
CLTCL1-205	ENST00000538828	SNURF	Q9Y675	71 aa		5.19	□□□□□ -1.58
CLTCL1-205	ENST00000538828	CHKB-CPT1B	H3BT56	60 aa		5.18	□□□□□ -1.58
CLTCL1-205	ENST00000538828	CCDC179	H3BU77	68 aa		5.18	□□□□□ -1.58
CLTCL1-205	ENST00000538828	KRTAP5-9	P26371	169 aa		5.18	□□□□□ -1.58
CLTCL1-205	ENST00000538828	MT1X	P80297	61 aa		5.17	□□□□□ -1.58
CLTCL1-205	ENST00000538828	KRTAP12-2	P59991	146 aa		5.12	□□□□□ -1.59
CLTCL1-205	ENST00000538828	LINC01554	Q52M75	96 aa		5.07	□□□□□ -1.6
CLTCL1-205	ENST00000538828	CYSTM1	Q9H1C7	97 aa		5.07	□□□□□ -1.6
CLTCL1-205	ENST00000538828		H7BZZ5	65 aa		5.06	□□□□□ -1.6
CLTCL1-205	ENST00000538828	TMEM258	P61165	79 aa		5.03	□□□□□ -1.6
CLTCL1-205	ENST00000538828	COA5	Q86WW8	74 aa		5.01	□□□□□ -1.61
CLTCL1-205	ENST00000538828	KMT2D	O14686	5537 aa		5	□□□□□ -1.61
CLTCL1-205	ENST00000538828	MUC12	Q9UKN1	5478 aa		4.99	□□□□□ -1.61
CLTCL1-205	ENST00000538828	ATP5E	P56381	51 aa	Predicted RBP	4.99	□□□□□ -1.61
CLTCL1-205	ENST00000538828	NEB	P20929	6669 aa		4.99	□□□□□ -1.61
CLTCL1-205	ENST00000538828	KRTAP8-1	Q8IUC2	63 aa		4.97	□□□□□ -1.61
CLTCL1-205	ENST00000538828	SEC61G	P60059	68 aa		4.95	□□□□□ -1.62
CLTCL1-205	ENST00000538828	KRTAP10-12	P60413	245 aa		4.95	□□□□□ -1.62
CLTCL1-205	ENST00000538828	SPRR2F	Q96RM1	72 aa		4.94	□□□□□ -1.62
CLTCL1-205	ENST00000538828	KRTAP13-4	Q3LI77	160 aa		4.93	□□□□□ -1.62
CLTCL1-205	ENST00000538828	SERP1	Q9Y6X1	66 aa		4.93	□□□□□ -1.62
CLTCL1-205	ENST00000538828	KRTAP20-1	Q3LI63	56 aa		4.9	□□□□□ -1.63
CLTCL1-205	ENST00000538828	MDN1	Q9NU22	5596 aa		4.89	□□□□□ -1.63
CLTCL1-205	ENST00000538828	KRTAP10-7	P60409	375 aa	Predicted RBP	4.89	□□□□□ -1.63
CLTCL1-205	ENST00000538828	KRTAP4-8	A0A0G2JLE6	195 aa		4.87	□□□□□ -1.63
CLTCL1-205	ENST00000538828	KRTAP4-8	Q9BYQ9	185 aa		4.87	□□□□□ -1.63
CLTCL1-205	ENST00000538828	SPRR2E	P22531	72 aa		4.86	□□□□□ -1.63
CLTCL1-205	ENST00000538828	SPRR2B	P35325	72 aa		4.86	□□□□□ -1.63
CLTCL1-205	ENST00000538828	SPRR2A	P35326	72 aa		4.86	□□□□□ -1.63
CLTCL1-205	ENST00000538828	RPS28	P62857	69 aa	Known RBP	4.86	□□□□□ -1.63
CLTCL1-205	ENST00000538828		A0A1B0GU33	70 aa		4.84	□□□□□ -1.63
CLTCL1-205	ENST00000538828	LCE1A	Q5T7P2	110 aa		4.84	□□□□□ -1.63
CLTCL1-205	ENST00000538828	CAMK2N1	Q7Z7J9	78 aa		4.84	□□□□□ -1.63
CLTCL1-205	ENST00000538828	KRTAP2-3	P0C7H8	128 aa		4.83	□□□□□ -1.64
CLTCL1-205	ENST00000538828	KRTAP2-4	Q9BYR9	128 aa		4.83	□□□□□ -1.64
CLTCL1-205	ENST00000538828		A0A1B0GU69	56 aa		4.77	□□□□□ -1.65
CLTCL1-205	ENST00000538828	SPATA8	Q6RVD6	105 aa		4.76	□□□□□ -1.65
CLTCL1-205	ENST00000538828	SMIM26	A0A096LP01	95 aa		4.75	□□□□□ -1.65
CLTCL1-205	ENST00000538828		A0A0D9SG42	100 aa		4.74	□□□□□ -1.65
CLTCL1-205	ENST00000538828	KRTAP12-1	P59990	96 aa		4.73	□□□□□ -1.65
CLTCL1-205	ENST00000538828	SPINT4	Q6UDR6	99 aa		4.71	□□□□□ -1.66
CLTCL1-205	ENST00000538828	SPRR2D	P22532	72 aa		4.7	□□□□□ -1.66
CLTCL1-205	ENST00000538828	PRR15L	Q9BU68	103 aa		4.69	□□□□□ -1.66
CLTCL1-205	ENST00000538828	KRTAP2-2	Q9BYT5	123 aa		4.69	□□□□□ -1.66
CLTCL1-205	ENST00000538828	KRTAP2-1	Q9BYU5	128 aa		4.69	□□□□□ -1.66
CLTCL1-205	ENST00000538828		V9GYY9	64 aa		4.68	□□□□□ -1.66
CLTCL1-205	ENST00000538828		Q1T7F1	81 aa		4.66	□□□□□ -1.66
CLTCL1-205	ENST00000538828	LINC01558	Q9Y6Z2	57 aa		4.65	□□□□□ -1.67
CLTCL1-205	ENST00000538828	KRTAP19-7	Q3SYF9	63 aa		4.62	□□□□□ -1.67
CLTCL1-205	ENST00000538828		A8MU10	97 aa		4.58	□□□□□ -1.68
CLTCL1-205	ENST00000538828	MT1E	P04732	61 aa		4.58	□□□□□ -1.68
CLTCL1-205	ENST00000538828	LCE3B	Q5TA77	95 aa		4.58	□□□□□ -1.68
CLTCL1-205	ENST00000538828	LCE5A	Q5TCM9	118 aa		4.57	□□□□□ -1.68
CLTCL1-205	ENST00000538828	PSPHP1	O15172	72 aa		4.55	□□□□□ -1.68
CLTCL1-205	ENST00000538828	KRTAP19-3	Q7Z4W3	81 aa		4.55	□□□□□ -1.68
CLTCL1-205	ENST00000538828	UQCR11	O14957	56 aa		4.54	□□□□□ -1.68
CLTCL1-205	ENST00000538828	TNP1	P09430	55 aa		4.53	□□□□□ -1.68
CLTCL1-205	ENST00000538828	C10orf95	Q9H7T3	257 aa		4.5	□□□□□ -1.69
CLTCL1-205	ENST00000538828	MT1G	P13640	62 aa		4.49	□□□□□ -1.69
CLTCL1-205	ENST00000538828	KRTAP19-5	Q3LI72	72 aa		4.49	□□□□□ -1.69
CLTCL1-205	ENST00000538828	PP632	Q6XCG6	107 aa		4.45	□□□□□ -1.7

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