RNA–Protein interactions for RNA: ENST00000538367.5

TRA2A-211, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-211ENST00000538367 SMR3BP02814 79 aaPredicted RBP9.27□□□□□ -0.93
TRA2A-211ENST00000538367 C9orf92A6NGG3 77 aa9.26□□□□□ -0.93
TRA2A-211ENST00000538367 NDUFAF8A1L188 74 aa9.25□□□□□ -0.93
TRA2A-211ENST00000538367 VPS13BQ7Z7G8 4022 aa9.24□□□□□ -0.93
TRA2A-211ENST00000538367 KRTAP13-4Q3LI77 160 aa9.23□□□□□ -0.93
TRA2A-211ENST00000538367 KRTAP3-2Q9BYR7 98 aa9.19□□□□□ -0.94
TRA2A-211ENST00000538367 KRTAP3-3Q9BYR6 98 aa9.17□□□□□ -0.94
TRA2A-211ENST00000538367 A0A0D9SG42 100 aa9.16□□□□□ -0.94
TRA2A-211ENST00000538367 KRTAP10-4P60372 401 aaPredicted RBP9.15□□□□□ -0.94
TRA2A-211ENST00000538367 S4R3F8 94 aa9.15□□□□□ -0.94
TRA2A-211ENST00000538367 C10orf95Q9H7T3 257 aa9.14□□□□□ -0.95
TRA2A-211ENST00000538367 FAT1Q14517 4588 aa9.1□□□□□ -0.95
TRA2A-211ENST00000538367 EPPK1P58107 5090 aaKnown RBP9.08□□□□□ -0.96
TRA2A-211ENST00000538367 HSPG2P98160 4391 aa9.07□□□□□ -0.96
TRA2A-211ENST00000538367 PKHD1L1Q86WI1 4243 aa9.07□□□□□ -0.96
TRA2A-211ENST00000538367 RYR1P21817 5038 aa9.07□□□□□ -0.96
TRA2A-211ENST00000538367 Q5VSD8 79 aa9.07□□□□□ -0.96
TRA2A-211ENST00000538367 XP32Q5T750 250 aa9.04□□□□□ -0.96
TRA2A-211ENST00000538367 KRTAP12-2P59991 146 aa9.01□□□□□ -0.97
TRA2A-211ENST00000538367 KIAA1109Q2LD37 5005 aa8.99□□□□□ -0.97
TRA2A-211ENST00000538367 KRTAP12-1P59990 96 aa8.97□□□□□ -0.97
TRA2A-211ENST00000538367 KRTAP17-1Q9BYP8 105 aa8.96□□□□□ -0.97
TRA2A-211ENST00000538367 M0QZ58 72 aa8.89□□□□□ -0.99
TRA2A-211ENST00000538367 KRTAP10-8P60410 259 aa8.8□□□□□ -1
TRA2A-211ENST00000538367 A0A0A0MQY5 61 aa8.79□□□□□ -1
TRA2A-211ENST00000538367 BIRC6Q9NR09 4857 aa8.79□□□□□ -1
TRA2A-211ENST00000538367 LRP1Q07954 4544 aaKnown RBP8.76□□□□□ -1.01
TRA2A-211ENST00000538367 KRTAP4-5Q9BYR2 181 aa8.76□□□□□ -1.01
TRA2A-211ENST00000538367 FAT3Q8TDW7 4589 aa8.75□□□□□ -1.01
TRA2A-211ENST00000538367 TNXBP22105 4242 aa8.73□□□□□ -1.01
TRA2A-211ENST00000538367 DMBT1Q9UGM3 2413 aaPredicted RBP8.72□□□□□ -1.01
TRA2A-211ENST00000538367 MT1HL1P0DM35 61 aa8.69□□□□□ -1.02
TRA2A-211ENST00000538367 LUZP6Q538Z0 58 aa8.68□□□□□ -1.02
TRA2A-211ENST00000538367 MYCBP2O75592 4640 aa8.66□□□□□ -1.02
TRA2A-211ENST00000538367 HERC2O95714 4834 aa8.66□□□□□ -1.02
TRA2A-211ENST00000538367 PLAC4Q8WY50 150 aa8.65□□□□□ -1.02
TRA2A-211ENST00000538367 ABCA13Q86UQ4 5058 aa8.58□□□□□ -1.04
TRA2A-211ENST00000538367 J3QL48 77 aa8.5□□□□□ -1.05
TRA2A-211ENST00000538367 PP632Q6XCG6 107 aa8.48□□□□□ -1.05
TRA2A-211ENST00000538367 R4GN34 69 aa8.39□□□□□ -1.07
TRA2A-211ENST00000538367 PCLOQ9Y6V0 5065 aa8.32□□□□□ -1.08
TRA2A-211ENST00000538367 LPAP08519 4548 aa8.16□□□□□ -1.1
TRA2A-211ENST00000538367 KRTAP23-1A1A580 65 aa8.12□□□□□ -1.11
TRA2A-211ENST00000538367 SPRR5A0A1B0GTR4 108 aa8.09□□□□□ -1.11
TRA2A-211ENST00000538367 LRP2P98164 4655 aa8.09□□□□□ -1.11
TRA2A-211ENST00000538367 HERC1Q15751 4861 aa8.08□□□□□ -1.12
TRA2A-211ENST00000538367 SEC61BP60468 96 aaKnown RBP8.03□□□□□ -1.12
TRA2A-211ENST00000538367 LORP23490 312 aaPredicted RBP8.02□□□□□ -1.13
TRA2A-211ENST00000538367 CAMK2N1Q7Z7J9 78 aa8.02□□□□□ -1.13
TRA2A-211ENST00000538367 HMCN2Q8NDA2 5059 aa7.99□□□□□ -1.13
TRA2A-211ENST00000538367 MUC17Q685J3 4493 aa7.89□□□□□ -1.15
TRA2A-211ENST00000538367 TNP1P09430 55 aa7.89□□□□□ -1.15
TRA2A-211ENST00000538367 KRTAP4-1Q9BYQ7 146 aa7.84□□□□□ -1.16
TRA2A-211ENST00000538367 PRO2289Q9P1D8 64 aa7.8□□□□□ -1.16
TRA2A-211ENST00000538367 INE1O15225 51 aa7.68□□□□□ -1.18
TRA2A-211ENST00000538367 KRTAP19-2Q3LHN2 52 aa7.64□□□□□ -1.19
TRA2A-211ENST00000538367 MUC2Q02817 5179 aa7.63□□□□□ -1.19
TRA2A-211ENST00000538367 UBR4Q5T4S7 5183 aa7.62□□□□□ -1.19
TRA2A-211ENST00000538367 RNF213Q63HN8 5207 aa7.57□□□□□ -1.2
TRA2A-211ENST00000538367 FLGP20930 4061 aaPredicted RBP7.49□□□□□ -1.21
TRA2A-211ENST00000538367 LCE2CQ5TA81 110 aa7.46□□□□□ -1.22
TRA2A-211ENST00000538367 FAT4Q6V0I7 4981 aa7.33□□□□□ -1.24
TRA2A-211ENST00000538367 MT1HP80294 61 aa7.33□□□□□ -1.24
TRA2A-211ENST00000538367 SPRR2GQ9BYE4 73 aa7.3□□□□□ -1.24
TRA2A-211ENST00000538367 LCE3AQ5TA76 89 aa7.29□□□□□ -1.24
TRA2A-211ENST00000538367 M0R2T5 61 aa7.28□□□□□ -1.24
TRA2A-211ENST00000538367 KRTAP8-1Q8IUC2 63 aa7.25□□□□□ -1.25
TRA2A-211ENST00000538367 KRTAP19-1Q8IUB9 90 aa7.12□□□□□ -1.27
TRA2A-211ENST00000538367 LCE2AQ5TA79 106 aaPredicted RBP7.07□□□□□ -1.28
TRA2A-211ENST00000538367 KRTAP9-8Q9BYQ0 159 aa7.04□□□□□ -1.28
TRA2A-211ENST00000538367 MT2AP02795 61 aa7.02□□□□□ -1.29
TRA2A-211ENST00000538367 MT1FP04733 61 aa6.98□□□□□ -1.29
TRA2A-211ENST00000538367 KRTAP10-10P60014 251 aa6.98□□□□□ -1.29
TRA2A-211ENST00000538367 KRTAP12-3P60328 96 aa6.97□□□□□ -1.29
TRA2A-211ENST00000538367 KRTAP10-12P60413 245 aa6.96□□□□□ -1.3
TRA2A-211ENST00000538367 KRTAP19-8Q3LI54 63 aa6.89□□□□□ -1.31
TRA2A-211ENST00000538367 KRTAP10-5P60370 271 aa6.8□□□□□ -1.32
TRA2A-211ENST00000538367 KRTAP9-3Q9BYQ3 159 aa6.79□□□□□ -1.32
TRA2A-211ENST00000538367 MT1XP80297 61 aa6.77□□□□□ -1.33
TRA2A-211ENST00000538367 MT1BP07438 61 aa6.67□□□□□ -1.34
TRA2A-211ENST00000538367 LCE3CQ5T5A8 94 aa6.61□□□□□ -1.35
TRA2A-211ENST00000538367 LCE2BO14633 110 aa6.61□□□□□ -1.35
TRA2A-211ENST00000538367 KRTAP10-7P60409 375 aaPredicted RBP6.56□□□□□ -1.36
TRA2A-211ENST00000538367 KRTAP2-3P0C7H8 128 aa6.48□□□□□ -1.37
TRA2A-211ENST00000538367 KRTAP2-4Q9BYR9 128 aa6.48□□□□□ -1.37
TRA2A-211ENST00000538367 KRTAP2-1Q9BYU5 128 aa6.48□□□□□ -1.37
TRA2A-211ENST00000538367 LCE2DQ5TA82 110 aaPredicted RBP6.44□□□□□ -1.38
TRA2A-211ENST00000538367 KRTAP19-5Q3LI72 72 aa6.42□□□□□ -1.38
TRA2A-211ENST00000538367 USH2AO75445 5202 aa6.41□□□□□ -1.38
TRA2A-211ENST00000538367 KRTAP19-4Q3LI73 84 aa6.39□□□□□ -1.39
TRA2A-211ENST00000538367 KRTAP9-6A8MVA2 160 aa6.31□□□□□ -1.4
TRA2A-211ENST00000538367 KRTAP9-6A0A140TA67 174 aa6.28□□□□□ -1.4
TRA2A-211ENST00000538367 KRTAP9-2Q9BYQ4 174 aa6.24□□□□□ -1.41
TRA2A-211ENST00000538367 SSPOA2VEC9 5147 aa6.23□□□□□ -1.41
TRA2A-211ENST00000538367 KRTAP19-6Q3LI70 58 aa6.22□□□□□ -1.41
TRA2A-211ENST00000538367 FSIP2Q5CZC0 6907 aa6.18□□□□□ -1.42
TRA2A-211ENST00000538367 KRTAP19-7Q3SYF9 63 aa6.02□□□□□ -1.45
TRA2A-211ENST00000538367 CRCT1Q9UGL9 99 aa5.99□□□□□ -1.45
TRA2A-211ENST00000538367 FCGBPQ9Y6R7 5405 aaPredicted RBP5.96□□□□□ -1.46
TRA2A-211ENST00000538367 KRTAP4-8A0A0G2JLE6 195 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms