RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 CASC2Q6XLA1 102 aa6.64□□□□□ -1.35
CHFR-216ENST00000538235 SEC61GP60059 68 aa6.63□□□□□ -1.35
CHFR-216ENST00000538235 TRAV22A0A0B4J277 110 aa6.62□□□□□ -1.35
CHFR-216ENST00000538235 TP53AIP1Q9HCN2 124 aa6.61□□□□□ -1.35
CHFR-216ENST00000538235 SPINK7P58062 85 aa6.59□□□□□ -1.35
CHFR-216ENST00000538235 LINC00208Q96KT6 92 aa6.59□□□□□ -1.35
CHFR-216ENST00000538235 NDUFS5O43920 106 aa6.58□□□□□ -1.36
CHFR-216ENST00000538235 COX6B2Q6YFQ2 88 aa6.57□□□□□ -1.36
CHFR-216ENST00000538235 H0Y9P7 68 aa6.56□□□□□ -1.36
CHFR-216ENST00000538235 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.55□□□□□ -1.36
CHFR-216ENST00000538235 KRTAP9-2Q9BYQ4 174 aa6.54□□□□□ -1.36
CHFR-216ENST00000538235 KRTAP10-6P60371 365 aaPredicted RBP6.53□□□□□ -1.36
CHFR-216ENST00000538235 LOC101927531A0A1B0GV80 90 aa6.51□□□□□ -1.37
CHFR-216ENST00000538235 KRTAP9-6A0A140TA67 174 aa6.5□□□□□ -1.37
CHFR-216ENST00000538235 PSPHP1O15172 72 aa6.5□□□□□ -1.37
CHFR-216ENST00000538235 CHKB-CPT1BH3BT56 60 aa6.49□□□□□ -1.37
CHFR-216ENST00000538235 IGKV2D-30A0A075B6S6 120 aa6.48□□□□□ -1.37
CHFR-216ENST00000538235 IGKV2-30P06310 120 aa6.48□□□□□ -1.37
CHFR-216ENST00000538235 A8MUN3 132 aa6.46□□□□□ -1.38
CHFR-216ENST00000538235 Q5VV11 94 aa6.46□□□□□ -1.38
CHFR-216ENST00000538235 KTN1-AS1Q86SY8 53 aa6.46□□□□□ -1.38
CHFR-216ENST00000538235 C7orf65Q6ZTY9 151 aa6.44□□□□□ -1.38
CHFR-216ENST00000538235 PRR15LQ9BU68 103 aa6.44□□□□□ -1.38
CHFR-216ENST00000538235 CDC42SE1Q9NRR8 79 aa6.44□□□□□ -1.38
CHFR-216ENST00000538235 RBM12B-AS1Q9P1G2 102 aa6.44□□□□□ -1.38
CHFR-216ENST00000538235 A6NED7 52 aa6.43□□□□□ -1.38
CHFR-216ENST00000538235 LINC01558Q9Y6Z2 57 aa6.43□□□□□ -1.38
CHFR-216ENST00000538235 M0R2T5 61 aa6.42□□□□□ -1.38
CHFR-216ENST00000538235 COA5Q86WW8 74 aa6.42□□□□□ -1.38
CHFR-216ENST00000538235 KRTAP9-8Q9BYQ0 159 aa6.41□□□□□ -1.38
CHFR-216ENST00000538235 KRTAP3-1Q9BYR8 98 aa6.39□□□□□ -1.39
CHFR-216ENST00000538235 MT2AP02795 61 aa6.34□□□□□ -1.39
CHFR-216ENST00000538235 LCE3BQ5TA77 95 aa6.33□□□□□ -1.4
CHFR-216ENST00000538235 SPTSSBQ8NFR3 76 aa6.33□□□□□ -1.4
CHFR-216ENST00000538235 MT1FP04733 61 aa6.32□□□□□ -1.4
CHFR-216ENST00000538235 ACYP2P14621 99 aa6.32□□□□□ -1.4
CHFR-216ENST00000538235 H1FX-AS1Q4G0G2 97 aa6.3□□□□□ -1.4
CHFR-216ENST00000538235 A6NN06 94 aa6.29□□□□□ -1.4
CHFR-216ENST00000538235 LCA10Q71F78 164 aa6.27□□□□□ -1.41
CHFR-216ENST00000538235 KRTAP4-12Q9BQ66 201 aa6.26□□□□□ -1.41
CHFR-216ENST00000538235 KRTAP9-9Q9BYP9 154 aa6.2□□□□□ -1.42
CHFR-216ENST00000538235 KRTAP9-4Q9BYQ2 154 aa6.2□□□□□ -1.42
CHFR-216ENST00000538235 KRTAP4-8A0A0G2JLE6 195 aa6.19□□□□□ -1.42
CHFR-216ENST00000538235 KRTAP9-3Q9BYQ3 159 aa6.19□□□□□ -1.42
CHFR-216ENST00000538235 USH2AO75445 5202 aa6.17□□□□□ -1.42
CHFR-216ENST00000538235 FSIP2Q5CZC0 6907 aa6.17□□□□□ -1.42
CHFR-216ENST00000538235 DMAC1Q96GE9 116 aa6.16□□□□□ -1.42
CHFR-216ENST00000538235 A0A1B0GU69 56 aa6.15□□□□□ -1.42
CHFR-216ENST00000538235 S4R3F8 94 aa6.15□□□□□ -1.42
CHFR-216ENST00000538235 KRTAP10-10P60014 251 aa6.14□□□□□ -1.43
CHFR-216ENST00000538235 UQCR11O14957 56 aa6.13□□□□□ -1.43
CHFR-216ENST00000538235 SPATA8Q6RVD6 105 aa6.12□□□□□ -1.43
CHFR-216ENST00000538235 SSPOA2VEC9 5147 aa6.08□□□□□ -1.44
CHFR-216ENST00000538235 A8MU10 97 aa6.07□□□□□ -1.44
CHFR-216ENST00000538235 CRCT1Q9UGL9 99 aa6.06□□□□□ -1.44
CHFR-216ENST00000538235 MIR22HGQ0VDD5 57 aa6.05□□□□□ -1.44
CHFR-216ENST00000538235 KRTAP19-1Q8IUB9 90 aa6.04□□□□□ -1.44
CHFR-216ENST00000538235 CSAG1Q6PB30 78 aa6.01□□□□□ -1.45
CHFR-216ENST00000538235 LINC01554Q52M75 96 aa6□□□□□ -1.45
CHFR-216ENST00000538235 KRTAP4-7Q9BYR0 210 aa6□□□□□ -1.45
CHFR-216ENST00000538235 LCE1DQ5T752 114 aa5.92□□□□□ -1.46
CHFR-216ENST00000538235 K7ERS5 55 aa5.88□□□□□ -1.47
CHFR-216ENST00000538235 SPRR2GQ9BYE4 73 aa5.88□□□□□ -1.47
CHFR-216ENST00000538235 MT1BP07438 61 aa5.87□□□□□ -1.47
CHFR-216ENST00000538235 FCGBPQ9Y6R7 5405 aaPredicted RBP5.87□□□□□ -1.47
CHFR-216ENST00000538235 H0YAA0 97 aa5.86□□□□□ -1.47
CHFR-216ENST00000538235 KRTAP19-8Q3LI54 63 aa5.84□□□□□ -1.47
CHFR-216ENST00000538235 ADM2Q7Z4H4 148 aa5.83□□□□□ -1.48
CHFR-216ENST00000538235 P0C880 135 aa5.82□□□□□ -1.48
CHFR-216ENST00000538235 KRTAP19-6Q3LI70 58 aa5.82□□□□□ -1.48
CHFR-216ENST00000538235 PRAC1Q96KF2 57 aa5.8□□□□□ -1.48
CHFR-216ENST00000538235 KRTAP4-9Q9BYQ8 210 aa5.79□□□□□ -1.48
CHFR-216ENST00000538235 A0A1B0GU33 70 aa5.74□□□□□ -1.49
CHFR-216ENST00000538235 KRTAP4-2Q9BYR5 136 aa5.74□□□□□ -1.49
CHFR-216ENST00000538235 CRIPTQ9P021 101 aa5.72□□□□□ -1.49
CHFR-216ENST00000538235 KRTAP25-1Q3LHN0 102 aa5.7□□□□□ -1.5
CHFR-216ENST00000538235 M0QZ58 72 aa5.61□□□□□ -1.51
CHFR-216ENST00000538235 KRTAP10-5P60370 271 aa5.61□□□□□ -1.51
CHFR-216ENST00000538235 H3BS24 57 aa5.6□□□□□ -1.51
CHFR-216ENST00000538235 MACF1Q9UPN3 7388 aaKnown RBP5.6□□□□□ -1.51
CHFR-216ENST00000538235 KRTAP13-4Q3LI77 160 aa5.59□□□□□ -1.51
CHFR-216ENST00000538235 R4GN34 69 aa5.59□□□□□ -1.51
CHFR-216ENST00000538235 ROMO1P60602 79 aa5.58□□□□□ -1.52
CHFR-216ENST00000538235 MT1XP80297 61 aa5.55□□□□□ -1.52
CHFR-216ENST00000538235 KRTAP4-11Q9BYQ6 195 aa5.53□□□□□ -1.52
CHFR-216ENST00000538235 SYNE2Q8WXH0 6885 aaKnown RBP5.53□□□□□ -1.52
CHFR-216ENST00000538235 KRTAP9-7A8MTY7 169 aa5.5□□□□□ -1.53
CHFR-216ENST00000538235 PLAC4Q8WY50 150 aa5.41□□□□□ -1.54
CHFR-216ENST00000538235 KMT2DO14686 5537 aa5.37□□□□□ -1.55
CHFR-216ENST00000538235 SPINT4Q6UDR6 99 aa5.36□□□□□ -1.55
CHFR-216ENST00000538235 KRTAP6-3Q3LI67 103 aa5.33□□□□□ -1.56
CHFR-216ENST00000538235 LCE4AQ5TA78 99 aa5.33□□□□□ -1.56
CHFR-216ENST00000538235 KRTAP5-3Q6L8H2 238 aa5.33□□□□□ -1.56
CHFR-216ENST00000538235 A0A0D9SG42 100 aa5.31□□□□□ -1.56
CHFR-216ENST00000538235 KRTAP10-7P60409 375 aaPredicted RBP5.31□□□□□ -1.56
CHFR-216ENST00000538235 PRO2289Q9P1D8 64 aa5.3□□□□□ -1.56
CHFR-216ENST00000538235 KRTAP12-2P59991 146 aa5.28□□□□□ -1.56
CHFR-216ENST00000538235 KRTAP12-1P59990 96 aa5.27□□□□□ -1.57
CHFR-216ENST00000538235 KRTAP5-9P26371 169 aa5.24□□□□□ -1.57
CHFR-216ENST00000538235 KRTAP10-12P60413 245 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms