RNA–Protein interactions for RNA: ENST00000537882.2

NDRG1-229, Transcript of N-myc downstream regulated 1, humanhuman

TSL 2 BASIC

Gene NDRG1, Length 2,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-229ENST00000537882 KRTAP3-3Q9BYR6 98 aa5.86□□□□□ -1.47
NDRG1-229ENST00000537882 S4R3F8 94 aa5.84□□□□□ -1.48
NDRG1-229ENST00000537882 HYDINQ4G0P3 5121 aa5.81□□□□□ -1.48
NDRG1-229ENST00000537882 SACSQ9NZJ4 4579 aa5.78□□□□□ -1.48
NDRG1-229ENST00000537882 KRTAP12-2P59991 146 aa5.78□□□□□ -1.48
NDRG1-229ENST00000537882 FAT2Q9NYQ8 4349 aa5.78□□□□□ -1.48
NDRG1-229ENST00000537882 XP32Q5T750 250 aa5.76□□□□□ -1.49
NDRG1-229ENST00000537882 PKD1P98161 4303 aa5.75□□□□□ -1.49
NDRG1-229ENST00000537882 DMBT1Q9UGM3 2413 aaPredicted RBP5.75□□□□□ -1.49
NDRG1-229ENST00000537882 KMT2CQ8NEZ4 4911 aaKnown RBP5.73□□□□□ -1.49
NDRG1-229ENST00000537882 KRTAP12-1P59990 96 aa5.73□□□□□ -1.49
NDRG1-229ENST00000537882 PKHD1L1Q86WI1 4243 aa5.7□□□□□ -1.5
NDRG1-229ENST00000537882 PKHD1P08F94 4074 aa5.69□□□□□ -1.5
NDRG1-229ENST00000537882 KRTAP10-8P60410 259 aa5.61□□□□□ -1.51
NDRG1-229ENST00000537882 M0QZ58 72 aa5.6□□□□□ -1.51
NDRG1-229ENST00000537882 FAT1Q14517 4588 aa5.57□□□□□ -1.52
NDRG1-229ENST00000537882 SMR3BP02814 79 aaPredicted RBP5.56□□□□□ -1.52
NDRG1-229ENST00000537882 KRTAP10-4P60372 401 aaPredicted RBP5.55□□□□□ -1.52
NDRG1-229ENST00000537882 CAMK2N1Q7Z7J9 78 aa5.55□□□□□ -1.52
NDRG1-229ENST00000537882 RYR3Q15413 4870 aa5.55□□□□□ -1.52
NDRG1-229ENST00000537882 PLAC4Q8WY50 150 aa5.55□□□□□ -1.52
NDRG1-229ENST00000537882 APOBP04114 4563 aaKnown RBP5.54□□□□□ -1.52
NDRG1-229ENST00000537882 LRP1Q07954 4544 aaKnown RBP5.5□□□□□ -1.53
NDRG1-229ENST00000537882 DYNC1H1Q14204 4646 aaKnown RBP5.49□□□□□ -1.53
NDRG1-229ENST00000537882 FAT3Q8TDW7 4589 aa5.44□□□□□ -1.54
NDRG1-229ENST00000537882 EPPK1P58107 5090 aaKnown RBP5.42□□□□□ -1.54
NDRG1-229ENST00000537882 TNXBP22105 4242 aa5.41□□□□□ -1.54
NDRG1-229ENST00000537882 HSPG2P98160 4391 aa5.41□□□□□ -1.54
NDRG1-229ENST00000537882 RYR2Q92736 4967 aa5.41□□□□□ -1.54
NDRG1-229ENST00000537882 MYCBP2O75592 4640 aa5.37□□□□□ -1.55
NDRG1-229ENST00000537882 KIAA1109Q2LD37 5005 aa5.35□□□□□ -1.55
NDRG1-229ENST00000537882 PP632Q6XCG6 107 aa5.33□□□□□ -1.56
NDRG1-229ENST00000537882 R4GN34 69 aa5.33□□□□□ -1.56
NDRG1-229ENST00000537882 A0A1B0GVY2 172 aa5.32□□□□□ -1.56
NDRG1-229ENST00000537882 KRTAP23-1A1A580 65 aa5.26□□□□□ -1.57
NDRG1-229ENST00000537882 KRTAP17-1Q9BYP8 105 aa5.26□□□□□ -1.57
NDRG1-229ENST00000537882 KRTAP4-5Q9BYR2 181 aa5.2□□□□□ -1.58
NDRG1-229ENST00000537882 LPAP08519 4548 aa5.19□□□□□ -1.58
NDRG1-229ENST00000537882 PRO2289Q9P1D8 64 aa5.19□□□□□ -1.58
NDRG1-229ENST00000537882 LORP23490 312 aaPredicted RBP5.17□□□□□ -1.58
NDRG1-229ENST00000537882 SPRR5A0A1B0GTR4 108 aa5.15□□□□□ -1.59
NDRG1-229ENST00000537882 RYR1P21817 5038 aa5.13□□□□□ -1.59
NDRG1-229ENST00000537882 Q5VSD8 79 aa5.12□□□□□ -1.59
NDRG1-229ENST00000537882 LRP2P98164 4655 aa5.07□□□□□ -1.6
NDRG1-229ENST00000537882 MT1HL1P0DM35 61 aa5.07□□□□□ -1.6
NDRG1-229ENST00000537882 PCLOQ9Y6V0 5065 aa5.05□□□□□ -1.6
NDRG1-229ENST00000537882 ABCA13Q86UQ4 5058 aa5.05□□□□□ -1.6
NDRG1-229ENST00000537882 TNP1P09430 55 aa4.99□□□□□ -1.61
NDRG1-229ENST00000537882 HERC2O95714 4834 aa4.99□□□□□ -1.61
NDRG1-229ENST00000537882 HERC1Q15751 4861 aa4.97□□□□□ -1.61
NDRG1-229ENST00000537882 BIRC6Q9NR09 4857 aa4.93□□□□□ -1.62
NDRG1-229ENST00000537882 MUC2Q02817 5179 aa4.9□□□□□ -1.63
NDRG1-229ENST00000537882 MUC17Q685J3 4493 aa4.87□□□□□ -1.63
NDRG1-229ENST00000537882 INE1O15225 51 aa4.86□□□□□ -1.63
NDRG1-229ENST00000537882 RNF213Q63HN8 5207 aa4.84□□□□□ -1.63
NDRG1-229ENST00000537882 KRTAP19-2Q3LHN2 52 aa4.84□□□□□ -1.63
NDRG1-229ENST00000537882 KRTAP4-1Q9BYQ7 146 aa4.83□□□□□ -1.64
NDRG1-229ENST00000537882 UBR4Q5T4S7 5183 aa4.79□□□□□ -1.64
NDRG1-229ENST00000537882 LCE3AQ5TA76 89 aa4.66□□□□□ -1.66
NDRG1-229ENST00000537882 FLGP20930 4061 aaPredicted RBP4.65□□□□□ -1.67
NDRG1-229ENST00000537882 KRTAP8-1Q8IUC2 63 aa4.59□□□□□ -1.68
NDRG1-229ENST00000537882 SPRR2GQ9BYE4 73 aa4.59□□□□□ -1.68
NDRG1-229ENST00000537882 FAT4Q6V0I7 4981 aa4.58□□□□□ -1.68
NDRG1-229ENST00000537882 HMCN2Q8NDA2 5059 aa4.54□□□□□ -1.68
NDRG1-229ENST00000537882 KRTAP19-1Q8IUB9 90 aa4.53□□□□□ -1.68
NDRG1-229ENST00000537882 LCE2AQ5TA79 106 aaPredicted RBP4.52□□□□□ -1.69
NDRG1-229ENST00000537882 LCE2CQ5TA81 110 aa4.5□□□□□ -1.69
NDRG1-229ENST00000537882 KRTAP10-12P60413 245 aa4.45□□□□□ -1.7
NDRG1-229ENST00000537882 KRTAP12-3P60328 96 aa4.43□□□□□ -1.7
NDRG1-229ENST00000537882 FSIP2Q5CZC0 6907 aa4.4□□□□□ -1.7
NDRG1-229ENST00000537882 KRTAP10-10P60014 251 aa4.33□□□□□ -1.72
NDRG1-229ENST00000537882 KRTAP10-5P60370 271 aa4.32□□□□□ -1.72
NDRG1-229ENST00000537882 KRTAP19-8Q3LI54 63 aa4.32□□□□□ -1.72
NDRG1-229ENST00000537882 M0R2T5 61 aa4.31□□□□□ -1.72
NDRG1-229ENST00000537882 MT1XP80297 61 aa4.3□□□□□ -1.72
NDRG1-229ENST00000537882 MT1FP04733 61 aa4.26□□□□□ -1.73
NDRG1-229ENST00000537882 LCE2DQ5TA82 110 aaPredicted RBP4.25□□□□□ -1.73
NDRG1-229ENST00000537882 MT2AP02795 61 aa4.24□□□□□ -1.73
NDRG1-229ENST00000537882 MT1BP07438 61 aa4.23□□□□□ -1.73
NDRG1-229ENST00000537882 KRTAP10-7P60409 375 aaPredicted RBP4.2□□□□□ -1.74
NDRG1-229ENST00000537882 LCE3CQ5T5A8 94 aa4.2□□□□□ -1.74
NDRG1-229ENST00000537882 MT1HP80294 61 aa4.19□□□□□ -1.74
NDRG1-229ENST00000537882 KRTAP9-8Q9BYQ0 159 aa4.17□□□□□ -1.74
NDRG1-229ENST00000537882 USH2AO75445 5202 aa4.17□□□□□ -1.74
NDRG1-229ENST00000537882 LCE2BO14633 110 aa4.17□□□□□ -1.74
NDRG1-229ENST00000537882 KRTAP2-3P0C7H8 128 aa4.12□□□□□ -1.75
NDRG1-229ENST00000537882 KRTAP2-4Q9BYR9 128 aa4.12□□□□□ -1.75
NDRG1-229ENST00000537882 KRTAP2-1Q9BYU5 128 aa4.12□□□□□ -1.75
NDRG1-229ENST00000537882 KRTAP19-5Q3LI72 72 aa4.09□□□□□ -1.75
NDRG1-229ENST00000537882 KRTAP9-6A8MVA2 160 aa4.08□□□□□ -1.76
NDRG1-229ENST00000537882 KRTAP9-6A0A140TA67 174 aa3.99□□□□□ -1.77
NDRG1-229ENST00000537882 KRTAP9-3Q9BYQ3 159 aa3.98□□□□□ -1.77
NDRG1-229ENST00000537882 KMT2DO14686 5537 aa3.98□□□□□ -1.77
NDRG1-229ENST00000537882 KRTAP9-2Q9BYQ4 174 aa3.95□□□□□ -1.78
NDRG1-229ENST00000537882 KRTAP2-2Q9BYT5 123 aa3.92□□□□□ -1.78
NDRG1-229ENST00000537882 KRTAP19-4Q3LI73 84 aa3.9□□□□□ -1.79
NDRG1-229ENST00000537882 KRTAP4-7Q9BYR0 210 aa3.84□□□□□ -1.79
NDRG1-229ENST00000537882 KRTAP19-7Q3SYF9 63 aa3.83□□□□□ -1.8
NDRG1-229ENST00000537882 KRTAP4-8A0A0G2JLE6 195 aa3.82□□□□□ -1.8
NDRG1-229ENST00000537882 KRTAP4-8Q9BYQ9 185 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms